RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 MTERF2Q49AM1 385 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 C10orf62Q5T681 223 aaPredicted RBP5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 PCNX4Q63HM2 1172 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 MYO1HQ8N1T3 1032 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 PAF1Q8N7H5 531 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 PPM1EQ8WY54 764 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 TMEM74Q96NL1 305 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 SLC4A9Q96Q91 983 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 TRIM56Q9BRZ2 755 aaKnown RBP5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 PRR14Q9BWN1 585 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 NT5C1AQ9BXI3 368 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 ETNK1Q9HBU6 452 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 AVENQ9NQS1 362 aaPredicted RBP5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 PFDN2Q9UHV9 154 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 FOXD3Q9UJU5 478 aaPredicted RBP5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 HCN4Q9Y3Q4 1203 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 A6NJY4 79 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 NPHP1O15259 732 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 KCNQ2O43526 872 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 RASGRP1O95267 797 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 SCGB1D2O95969 90 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 CDC27P30260 824 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 PSEN2P49810 448 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 GUCY2FP51841 1108 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 PSMA6P60900 246 aaKnown RBP5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 CCDC85BQ15834 202 aaPredicted RBP5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 MAP3K11Q16584 847 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 LINC01559Q495D7 138 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 MSS51Q4VC12 460 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 C4orf48Q5BLP8 95 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 FBXL19Q6PCT2 694 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 CHPFQ8IZ52 775 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 FAM169BQ8N8A8 192 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 ATL2Q8NHH9 583 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 NKD1Q969G9 470 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 SHDQ96IW2 340 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 SRCIN1Q9C0H9 1055 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 PPCSQ9HAB8 311 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 MAP3K20Q9NYL2 800 aaKnown RBP5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 ACTR10Q9NZ32 417 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 UBP1Q9NZI7 540 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 MCM8Q9UJA3 840 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 INTUQ9ULD6 942 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 MAPK8IP1Q9UQF2 711 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 PLAAQ9Y263 795 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 PTCH2Q9Y6C5 1203 aa5.07□□□□□ -1.6
RNU4-60P-201ENST00000517239 CCER2I3L3R5 266 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 ERVH48-1M5A8F1 160 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 DIAPH1O60610 1272 aaKnown RBP5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 RPLP1P05386 114 aaKnown RBP5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 POLR3DP05423 398 aaPredicted RBP5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 PMLP29590 882 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 RAB27AP51159 221 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 MMP16P51512 607 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 SMTNP53814 917 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 FAM160A1Q05DH4 1040 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 MCL1Q07820 350 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 HLTFQ14527 1009 aaKnown RBP eCLIP5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 C1orf53Q5VUE5 145 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 FBXW10Q5XX13 1052 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 LARP1BQ659C4 914 aaKnown RBP5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 TREML1Q86YW5 311 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 ALDH16A1Q8IZ83 802 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 CNPY4Q8N129 248 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 TTC8Q8TAM2 541 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 KCTD15Q96SI1 283 aaPredicted RBP5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 OSBPL3Q9H4L5 887 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 CAAP1Q9H8G2 361 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 PRDM9Q9NQV7 894 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 CDV3Q9UKY7 258 aaKnown RBP5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 PPT2Q9UMR5 302 aa5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 SUPT16HQ9Y5B9 1047 aaKnown RBP5.06□□□□□ -1.6
RNU4-60P-201ENST00000517239 SERTM1A2A2V5 107 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 ZNF500O60304 480 aaPredicted RBP5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 ZPR1O75312 459 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 HSP90AA1P07900 732 aaKnown RBP5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 GSTT1P30711 240 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 STAT3P40763 770 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 EIF6P56537 245 aaKnown RBP5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 ERVK-9P63128 1117 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 POU5F1BQ06416 359 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 APOBRQ0VD83 1088 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 TM4SF20Q53R12 229 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 THNSL2Q86YJ6 484 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 POTEDQ86YR6 584 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 SYNPOQ8N3V7 929 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 MFSD3Q96ES6 412 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 CRBNQ96SW2 442 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 SPSB2Q99619 263 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 ZFYVE28Q9HCC9 887 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 NPHS2Q9NP85 383 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 CASS4Q9NQ75 786 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 ENAMQ9NRM1 1142 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 PPP4R2Q9NY27 417 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 ZIM2Q9NZV7 527 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 NOB1Q9ULX3 412 aaKnown RBP5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 ZNF232Q9UNY5 417 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 PCDHB3Q9Y5E6 796 aa5.05□□□□□ -1.6
RNU4-60P-201ENST00000517239 IRS4O14654 1257 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms