RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 SUPT20HQ8NEM7 779 aa11.17□□□□□ -0.62
TRIM6-211ENST00000515022 CCDC102AQ96A19 550 aa11.17□□□□□ -0.62
TRIM6-211ENST00000515022 NLRP3Q96P20 1036 aa11.17□□□□□ -0.62
TRIM6-211ENST00000515022 THUMPD2Q9BTF0 503 aaKnown RBP11.17□□□□□ -0.62
TRIM6-211ENST00000515022 DBNDD1Q9H9R9 158 aa11.17□□□□□ -0.62
TRIM6-211ENST00000515022 KIAA0100Q14667 2235 aaKnown RBP11.16□□□□□ -0.62
TRIM6-211ENST00000515022 RIMBP2O15034 1052 aa11.16□□□□□ -0.62
TRIM6-211ENST00000515022 TBC1D8O95759 1140 aa11.16□□□□□ -0.62
TRIM6-211ENST00000515022 SLC10A3P09131 477 aa11.16□□□□□ -0.62
TRIM6-211ENST00000515022 TAF7Q15545 349 aaPredicted RBP11.16□□□□□ -0.62
TRIM6-211ENST00000515022 SP8Q8IXZ3 490 aa11.16□□□□□ -0.62
TRIM6-211ENST00000515022 CDHR2Q9BYE9 1310 aa11.15□□□□□ -0.62
TRIM6-211ENST00000515022 U2AF1L5P0DN76 240 aaPredicted RBP11.15□□□□□ -0.62
TRIM6-211ENST00000515022 U2AF1Q01081 240 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRIM6-211ENST00000515022 DOK7Q18PE1 504 aa11.15□□□□□ -0.62
TRIM6-211ENST00000515022 MOB2Q70IA6 237 aa11.15□□□□□ -0.62
TRIM6-211ENST00000515022 RASAL3Q86YV0 1011 aa11.15□□□□□ -0.62
TRIM6-211ENST00000515022 DCPSQ96C86 337 aaKnown RBP11.15□□□□□ -0.62
TRIM6-211ENST00000515022 MS4A3Q96HJ5 214 aa11.15□□□□□ -0.62
TRIM6-211ENST00000515022 UTP14AQ9BVJ6 771 aaKnown RBP11.15□□□□□ -0.62
TRIM6-211ENST00000515022 VPS33BQ9H267 617 aa11.15□□□□□ -0.62
TRIM6-211ENST00000515022 HDAC9Q9UKV0 1011 aa11.15□□□□□ -0.62
TRIM6-211ENST00000515022 SCAF8Q9UPN6 1271 aaKnown RBP11.15□□□□□ -0.62
TRIM6-211ENST00000515022 DUOX1Q9NRD9 1551 aa11.15□□□□□ -0.62
TRIM6-211ENST00000515022 IBTKQ9P2D0 1353 aaPredicted RBP11.15□□□□□ -0.63
TRIM6-211ENST00000515022 CEP290O15078 2479 aa11.14□□□□□ -0.63
TRIM6-211ENST00000515022 RIOK3O14730 519 aaKnown RBP11.14□□□□□ -0.63
TRIM6-211ENST00000515022 ANXA1P04083 346 aa11.14□□□□□ -0.63
TRIM6-211ENST00000515022 HABP4Q5JVS0 413 aaKnown RBP11.14□□□□□ -0.63
TRIM6-211ENST00000515022 GIGYF2Q6Y7W6 1299 aaKnown RBP11.14□□□□□ -0.63
TRIM6-211ENST00000515022 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
TRIM6-211ENST00000515022 ZNF296Q8WUU4 475 aaPredicted RBP11.14□□□□□ -0.63
TRIM6-211ENST00000515022 CDCA5Q96FF9 252 aa11.14□□□□□ -0.63
TRIM6-211ENST00000515022 GGA3Q9NZ52 723 aa11.14□□□□□ -0.63
TRIM6-211ENST00000515022 KDM3BQ7LBC6 1761 aa11.13□□□□□ -0.63
TRIM6-211ENST00000515022 GABBR2O75899 941 aa11.13□□□□□ -0.63
TRIM6-211ENST00000515022 BBOX1O75936 387 aa11.13□□□□□ -0.63
TRIM6-211ENST00000515022 MKRN3Q13064 507 aaKnown RBP11.13□□□□□ -0.63
TRIM6-211ENST00000515022 SLC10A5Q5PT55 438 aa11.13□□□□□ -0.63
TRIM6-211ENST00000515022 IFNL1Q8IU54 200 aa11.13□□□□□ -0.63
TRIM6-211ENST00000515022 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
TRIM6-211ENST00000515022 SCN9AQ15858 1988 aa11.13□□□□□ -0.63
TRIM6-211ENST00000515022 DLG5Q8TDM6 1919 aa11.13□□□□□ -0.63
TRIM6-211ENST00000515022 TRIOBPQ9H2D6 2365 aa11.12□□□□□ -0.63
TRIM6-211ENST00000515022 CENPFP49454 3210 aa11.12□□□□□ -0.63
TRIM6-211ENST00000515022 EIF4A1P60842 406 aaKnown RBP11.12□□□□□ -0.63
TRIM6-211ENST00000515022 GRAPQ13588 217 aa11.12□□□□□ -0.63
TRIM6-211ENST00000515022 PROSER3Q2NL68 480 aa11.12□□□□□ -0.63
TRIM6-211ENST00000515022 KIF4BQ2VIQ3 1234 aa11.12□□□□□ -0.63
TRIM6-211ENST00000515022 PARP10Q53GL7 1025 aa11.12□□□□□ -0.63
TRIM6-211ENST00000515022 DDX46Q7L014 1031 aaKnown RBP11.12□□□□□ -0.63
TRIM6-211ENST00000515022 GRAPLQ8TC17 118 aaPredicted RBP11.12□□□□□ -0.63
TRIM6-211ENST00000515022 DPF2Q92785 391 aa11.12□□□□□ -0.63
TRIM6-211ENST00000515022 RNF25Q96BH1 459 aaPredicted RBP11.12□□□□□ -0.63
TRIM6-211ENST00000515022 ANKRD36CQ5JPF3 1778 aa11.12□□□□□ -0.63
TRIM6-211ENST00000515022 RTL9Q8NET4 1388 aa11.12□□□□□ -0.63
TRIM6-211ENST00000515022 COL4A1P02462 1669 aa11.11□□□□□ -0.63
TRIM6-211ENST00000515022 UBE2Q2LH0YL09 131 aa11.11□□□□□ -0.63
TRIM6-211ENST00000515022 C6orf229H3BNL8 230 aa11.11□□□□□ -0.63
TRIM6-211ENST00000515022 ECE2O60344 883 aa11.11□□□□□ -0.63
TRIM6-211ENST00000515022 EIF2S2P20042 333 aaKnown RBP11.11□□□□□ -0.63
TRIM6-211ENST00000515022 WASHC4Q2M389 1173 aa11.11□□□□□ -0.63
TRIM6-211ENST00000515022 PRAMEF18Q5VWM3 479 aa11.11□□□□□ -0.63
TRIM6-211ENST00000515022 SULF1Q8IWU6 871 aa11.11□□□□□ -0.63
TRIM6-211ENST00000515022 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
TRIM6-211ENST00000515022 PCDHB8Q9UN66 801 aa11.11□□□□□ -0.63
TRIM6-211ENST00000515022 NSFL1CQ9UNZ2 370 aaKnown RBP11.11□□□□□ -0.63
TRIM6-211ENST00000515022 HTTP42858 3142 aa11.1□□□□□ -0.63
TRIM6-211ENST00000515022 GALR2O43603 387 aaPredicted RBP11.1□□□□□ -0.63
TRIM6-211ENST00000515022 GPSM2P81274 684 aa11.1□□□□□ -0.63
TRIM6-211ENST00000515022 NECTIN2Q92692 538 aa11.1□□□□□ -0.63
TRIM6-211ENST00000515022 CFAP53Q96M91 514 aa11.1□□□□□ -0.63
TRIM6-211ENST00000515022 POLLQ9UGP5 575 aa11.1□□□□□ -0.63
TRIM6-211ENST00000515022 POTEFA5A3E0 1075 aa11.09□□□□□ -0.63
TRIM6-211ENST00000515022 HTATSF1O43719 755 aaKnown RBP11.09□□□□□ -0.63
TRIM6-211ENST00000515022 AIMP1Q12904 312 aaKnown RBP11.09□□□□□ -0.63
TRIM6-211ENST00000515022 SCARF1Q14162 830 aa11.09□□□□□ -0.63
TRIM6-211ENST00000515022 PDIA6Q15084 440 aa11.09□□□□□ -0.63
TRIM6-211ENST00000515022 PKN2Q16513 984 aaKnown RBP11.09□□□□□ -0.63
TRIM6-211ENST00000515022 ANGEL2Q5VTE6 544 aaKnown RBP11.09□□□□□ -0.63
TRIM6-211ENST00000515022 NLRP10Q86W26 655 aa11.09□□□□□ -0.63
TRIM6-211ENST00000515022 CELF1Q92879 486 aaKnown RBP11.09□□□□□ -0.63
TRIM6-211ENST00000515022 GCC1Q96CN9 775 aa11.09□□□□□ -0.63
TRIM6-211ENST00000515022 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.09□□□□□ -0.63
TRIM6-211ENST00000515022 TRMT112Q9UI30 125 aaKnown RBP11.09□□□□□ -0.63
TRIM6-211ENST00000515022 NUDCQ9Y266 331 aa11.09□□□□□ -0.63
TRIM6-211ENST00000515022 BRCA2P51587 3418 aa11.09□□□□□ -0.63
TRIM6-211ENST00000515022 SZT2Q5T011 3432 aa11.09□□□□□ -0.63
TRIM6-211ENST00000515022 GPR25O00155 361 aa11.08□□□□□ -0.64
TRIM6-211ENST00000515022 FBXO46Q6PJ61 603 aaPredicted RBP11.08□□□□□ -0.64
TRIM6-211ENST00000515022 LRP10Q7Z4F1 713 aa11.08□□□□□ -0.64
TRIM6-211ENST00000515022 LRRC37AA6NMS7 1700 aa11.08□□□□□ -0.64
TRIM6-211ENST00000515022 RPS12P25398 132 aaKnown RBP11.07□□□□□ -0.64
TRIM6-211ENST00000515022 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRIM6-211ENST00000515022 PDAP1Q13442 181 aaKnown RBP11.07□□□□□ -0.64
TRIM6-211ENST00000515022 TTLL12Q14166 644 aaPredicted RBP11.07□□□□□ -0.64
TRIM6-211ENST00000515022 RTL5Q5HYW3 569 aaPredicted RBP11.07□□□□□ -0.64
TRIM6-211ENST00000515022 PNISRQ8TF01 805 aaKnown RBP11.07□□□□□ -0.64
TRIM6-211ENST00000515022 XAGE3Q8WTP9 111 aa11.07□□□□□ -0.64
TRIM6-211ENST00000515022 PAPPA2Q9BXP8 1791 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms