RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 C8orf76Q96K31 380 aa8.64□□□□□ -1.03
CCDC30-214ENST00000514642 ARHGEF5Q12774 1597 aa8.64□□□□□ -1.03
CCDC30-214ENST00000514642 VSIG10Q8N0Z9 540 aa8.64□□□□□ -1.03
CCDC30-214ENST00000514642 NAP1L4Q99733 375 aaKnown RBP8.64□□□□□ -1.03
CCDC30-214ENST00000514642 C6orf50Q9HD87 102 aa8.64□□□□□ -1.03
CCDC30-214ENST00000514642 POLKQ9UBT6 870 aa8.64□□□□□ -1.03
CCDC30-214ENST00000514642 ATP2B4P23634 1241 aa8.64□□□□□ -1.03
CCDC30-214ENST00000514642 CCDC181Q5TID7 509 aa8.64□□□□□ -1.03
CCDC30-214ENST00000514642 JAKMIP3Q5VZ66 844 aa8.64□□□□□ -1.03
CCDC30-214ENST00000514642 MAGEB6Q8N7X4 407 aa8.64□□□□□ -1.03
CCDC30-214ENST00000514642 SPATA32Q96LK8 384 aa8.64□□□□□ -1.03
CCDC30-214ENST00000514642 PUM3Q15397 648 aaKnown RBP8.64□□□□□ -1.03
CCDC30-214ENST00000514642 CCDC191Q8NCU4 936 aa8.64□□□□□ -1.03
CCDC30-214ENST00000514642 METAP2P50579 478 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCDC30-214ENST00000514642 LINS1Q8NG48 757 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 HMG20BQ9P0W2 317 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 HMGN5P82970 282 aaKnown RBP8.63□□□□□ -1.03
CCDC30-214ENST00000514642 ACBD3Q9H3P7 528 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 FBLN1P23142 703 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 ITGA6P23229 1130 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 CCDC174Q6PII3 467 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 HEATR3Q7Z4Q2 680 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 CCDC117Q8IWD4 279 aaPredicted RBP8.63□□□□□ -1.03
CCDC30-214ENST00000514642 MBD3O95983 291 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 FKBP15Q5T1M5 1219 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 ANKRD62A6NC57 917 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 PPEF1O14829 653 aaPredicted RBP8.63□□□□□ -1.03
CCDC30-214ENST00000514642 RARSP54136 660 aaKnown RBP8.63□□□□□ -1.03
CCDC30-214ENST00000514642 LRRC45Q96CN5 670 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 DDX11Q96FC9 970 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 CARD10Q9BWT7 1032 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 SH2B1Q9NRF2 756 aaPredicted RBP8.63□□□□□ -1.03
CCDC30-214ENST00000514642 OSBPP22059 807 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 IARSP41252 1262 aaKnown RBP8.63□□□□□ -1.03
CCDC30-214ENST00000514642 TMC4Q7Z404 712 aa8.63□□□□□ -1.03
CCDC30-214ENST00000514642 FIBPO43427 364 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 EPB41L2O43491 1005 aaKnown RBP8.62□□□□□ -1.03
CCDC30-214ENST00000514642 SLC9C2Q5TAH2 1124 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 TTLL5Q6EMB2 1281 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 TRMT1LQ7Z2T5 733 aaKnown RBP8.62□□□□□ -1.03
CCDC30-214ENST00000514642 POLR3AO14802 1390 aaPredicted RBP8.62□□□□□ -1.03
CCDC30-214ENST00000514642 MCM5P33992 734 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 NAPAP54920 295 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 SPOUT1Q5T280 376 aaKnown RBP8.62□□□□□ -1.03
CCDC30-214ENST00000514642 GADL1Q6ZQY3 521 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 CCDC82Q8N4S0 544 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 TNMDQ9H2S6 317 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 SAP30BPQ9UHR5 308 aaKnown RBP8.62□□□□□ -1.03
CCDC30-214ENST00000514642 SAMD9LQ8IVG5 1584 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 JCADQ9P266 1359 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 ZRSR2Q15696 482 aaKnown RBP8.62□□□□□ -1.03
CCDC30-214ENST00000514642 MAGI3Q5TCQ9 1506 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 MLH3Q9UHC1 1453 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 MROH5Q6ZUA9 1318 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 HCLS1P14317 486 aaPredicted RBP8.62□□□□□ -1.03
CCDC30-214ENST00000514642 ANAPC15P60006 121 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 PABPN1LA6NDY0 278 aaKnown RBP8.62□□□□□ -1.03
CCDC30-214ENST00000514642 FERMT1Q9BQL6 677 aa8.62□□□□□ -1.03
CCDC30-214ENST00000514642 DDX21Q9NR30 783 aaKnown RBP eCLIP8.62□□□□□ -1.03
CCDC30-214ENST00000514642 SMTNL1A8MU46 457 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 EIF5P55010 431 aaKnown RBP8.61□□□□□ -1.03
CCDC30-214ENST00000514642 VPS36Q86VN1 386 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 HELBQ8NG08 1087 aaPredicted RBP8.61□□□□□ -1.03
CCDC30-214ENST00000514642 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCDC30-214ENST00000514642 PAG1Q9NWQ8 432 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 SPATA31A6Q5VVP1 1343 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 PARP1P09874 1014 aaKnown RBP8.61□□□□□ -1.03
CCDC30-214ENST00000514642 CCDC93Q567U6 631 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 METTL22Q9BUU2 404 aaPredicted RBP8.61□□□□□ -1.03
CCDC30-214ENST00000514642 ADGRL2O95490 1459 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 NOP56O00567 594 aaKnown RBP8.61□□□□□ -1.03
CCDC30-214ENST00000514642 NBPF7P0C2Y1 421 aaPredicted RBP8.61□□□□□ -1.03
CCDC30-214ENST00000514642 PLEKHG3A1L390 1219 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 ZEB2O60315 1214 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 SLC26A6Q9BXS9 759 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 NBPF3Q9H094 633 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 HOMER2Q9NSB8 354 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 JAG2Q9Y219 1238 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 SHROOM2Q13796 1616 aa8.61□□□□□ -1.03
CCDC30-214ENST00000514642 CCDC144CPQ8IYA2 1237 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 MNS1Q8NEH6 495 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 HAND2P61296 217 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 SEPT7Q16181 437 aaKnown RBP8.6□□□□□ -1.03
CCDC30-214ENST00000514642 DNAJC10Q8IXB1 793 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 ARHGAP45Q92619 1136 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 K7ELQ4 463 aaPredicted RBP8.6□□□□□ -1.03
CCDC30-214ENST00000514642 BACH1O14867 736 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 ZBTB24O43167 697 aaPredicted RBP8.6□□□□□ -1.03
CCDC30-214ENST00000514642 PHACTR2O75167 634 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 RTKN2Q8IZC4 609 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 WDR70Q9NW82 654 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 RNF113AO15541 343 aaKnown RBP8.6□□□□□ -1.03
CCDC30-214ENST00000514642 RTN1Q16799 776 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 TEKT1Q969V4 418 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 TSPY26PQ9H489 355 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 USP16Q9Y5T5 823 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 ERVK-7P63135 1459 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 DKC1O60832 514 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCDC30-214ENST00000514642 MCMDC2Q4G0Z9 681 aa8.6□□□□□ -1.03
CCDC30-214ENST00000514642 HOXB7P09629 217 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms