RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 PLEKHF1Q96S99 279 aa7.8□□□□□ -1.16
GYPB-213ENST00000513128 LIMD1Q9UGP4 676 aa7.8□□□□□ -1.16
GYPB-213ENST00000513128 MKRN1Q9UHC7 482 aaKnown RBP7.8□□□□□ -1.16
GYPB-213ENST00000513128 ZNF652Q9Y2D9 606 aa7.8□□□□□ -1.16
GYPB-213ENST00000513128 PASKQ96RG2 1323 aa7.79□□□□□ -1.16
GYPB-213ENST00000513128 ITGBL1O95965 494 aaPredicted RBP7.79□□□□□ -1.16
GYPB-213ENST00000513128 FKBP4Q02790 459 aaKnown RBP eCLIP7.79□□□□□ -1.16
GYPB-213ENST00000513128 CCDC93Q567U6 631 aa7.79□□□□□ -1.16
GYPB-213ENST00000513128 TNS4Q8IZW8 715 aa7.79□□□□□ -1.16
GYPB-213ENST00000513128 GLMNQ92990 594 aa7.79□□□□□ -1.16
GYPB-213ENST00000513128 L3MBTL3Q96JM7 780 aaPredicted RBP7.79□□□□□ -1.16
GYPB-213ENST00000513128 CALR3Q96L12 384 aaKnown RBP7.79□□□□□ -1.16
GYPB-213ENST00000513128 TAF1DQ9H5J8 278 aaPredicted RBP7.79□□□□□ -1.16
GYPB-213ENST00000513128 BOLA1Q9Y3E2 137 aa7.79□□□□□ -1.16
GYPB-213ENST00000513128 LAMB2P55268 1798 aa7.79□□□□□ -1.16
GYPB-213ENST00000513128 UBN2Q6ZU65 1347 aa7.78□□□□□ -1.16
GYPB-213ENST00000513128 GPTP24298 496 aa7.78□□□□□ -1.16
GYPB-213ENST00000513128 EIF4A1P60842 406 aaKnown RBP7.78□□□□□ -1.16
GYPB-213ENST00000513128 CRY2Q49AN0 593 aa7.78□□□□□ -1.16
GYPB-213ENST00000513128 SOGA3Q5TF21 947 aa7.78□□□□□ -1.16
GYPB-213ENST00000513128 C3orf67Q6ZVT6 689 aa7.78□□□□□ -1.16
GYPB-213ENST00000513128 SYNE4Q8N205 404 aa7.78□□□□□ -1.16
GYPB-213ENST00000513128 TBC1D2Q9BYX2 928 aa7.78□□□□□ -1.16
GYPB-213ENST00000513128 RRP7AQ9Y3A4 280 aaKnown RBP7.78□□□□□ -1.16
GYPB-213ENST00000513128 RNF123Q5XPI4 1314 aa7.78□□□□□ -1.16
GYPB-213ENST00000513128 MAP3K15Q6ZN16 1313 aa7.78□□□□□ -1.16
GYPB-213ENST00000513128 TAF1P21675 1872 aa7.77□□□□□ -1.17
GYPB-213ENST00000513128 CARNS1A5YM72 827 aa7.77□□□□□ -1.17
GYPB-213ENST00000513128 FZD9O00144 591 aa7.77□□□□□ -1.17
GYPB-213ENST00000513128 MYL6BP14649 208 aa7.77□□□□□ -1.17
GYPB-213ENST00000513128 IARSP41252 1262 aaKnown RBP7.77□□□□□ -1.17
GYPB-213ENST00000513128 TSR1Q2NL82 804 aaKnown RBP7.77□□□□□ -1.17
GYPB-213ENST00000513128 EAPPQ56P03 285 aaPredicted RBP7.77□□□□□ -1.17
GYPB-213ENST00000513128 SUSD4Q5VX71 490 aa7.77□□□□□ -1.17
GYPB-213ENST00000513128 METTL3Q86U44 580 aaKnown RBP7.77□□□□□ -1.17
GYPB-213ENST00000513128 LDHDQ86WU2 507 aa7.77□□□□□ -1.17
GYPB-213ENST00000513128 ZBTB3Q9H5J0 574 aa7.77□□□□□ -1.17
GYPB-213ENST00000513128 ANKRD36CQ5JPF3 1778 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 CNTNAP1P78357 1384 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 IQCA1LA6NCM1 817 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 ERVV-1B6SEH8 477 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 TCERG1O14776 1098 aaKnown RBP7.76□□□□□ -1.17
GYPB-213ENST00000513128 ANXA1P04083 346 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 GTF2E1P29083 439 aaPredicted RBP7.76□□□□□ -1.17
GYPB-213ENST00000513128 ALDH1B1P30837 517 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 EPHX2P34913 555 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 ABL2P42684 1182 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 FMR1Q06787 632 aaKnown RBP eCLIP7.76□□□□□ -1.17
GYPB-213ENST00000513128 NFE2L2Q16236 605 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 PROSER3Q2NL68 480 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 MAP1SQ66K74 1059 aaPredicted RBP7.76□□□□□ -1.17
GYPB-213ENST00000513128 PPP2R2DQ66LE6 453 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 LRP10Q7Z4F1 713 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 ZNF34Q8IZ26 560 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 RTKN2Q8IZC4 609 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 HACL1Q9UJ83 578 aa7.76□□□□□ -1.17
GYPB-213ENST00000513128 FOXN1O15353 648 aa7.75□□□□□ -1.17
GYPB-213ENST00000513128 MAP3K7O43318 606 aa7.75□□□□□ -1.17
GYPB-213ENST00000513128 NTSR2O95665 410 aa7.75□□□□□ -1.17
GYPB-213ENST00000513128 HOXA10P31260 410 aaPredicted RBP7.75□□□□□ -1.17
GYPB-213ENST00000513128 VEGFBP49765 207 aa7.75□□□□□ -1.17
GYPB-213ENST00000513128 TMEM259Q4ZIN3 620 aa7.75□□□□□ -1.17
GYPB-213ENST00000513128 RIC1Q4ADV7 1423 aa7.75□□□□□ -1.17
GYPB-213ENST00000513128 IBTKQ9P2D0 1353 aaPredicted RBP7.74□□□□□ -1.17
GYPB-213ENST00000513128 COL4A1P02462 1669 aa7.74□□□□□ -1.17
GYPB-213ENST00000513128 TMEM88BA6NKF7 163 aa7.74□□□□□ -1.17
GYPB-213ENST00000513128 SCNN1DP51172 638 aa7.74□□□□□ -1.17
GYPB-213ENST00000513128 IRX5P78411 483 aaPredicted RBP7.74□□□□□ -1.17
GYPB-213ENST00000513128 KIF6Q6ZMV9 814 aa7.74□□□□□ -1.17
GYPB-213ENST00000513128 CNTROBQ8N137 903 aa7.74□□□□□ -1.17
GYPB-213ENST00000513128 GPC2Q8N158 579 aa7.74□□□□□ -1.17
GYPB-213ENST00000513128 PNISRQ8TF01 805 aaKnown RBP7.74□□□□□ -1.17
GYPB-213ENST00000513128 PSMD1Q99460 953 aa7.74□□□□□ -1.17
GYPB-213ENST00000513128 NYXQ9GZU5 481 aa7.74□□□□□ -1.17
GYPB-213ENST00000513128 GJA3Q9Y6H8 435 aa7.74□□□□□ -1.17
GYPB-213ENST00000513128 DDX60Q8IY21 1712 aaKnown RBP7.73□□□□□ -1.17
GYPB-213ENST00000513128 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.73□□□□□ -1.17
GYPB-213ENST00000513128 PPEF1O14829 653 aaPredicted RBP7.73□□□□□ -1.17
GYPB-213ENST00000513128 EIF2S2P20042 333 aaKnown RBP7.73□□□□□ -1.17
GYPB-213ENST00000513128 EPS15P42566 896 aa7.73□□□□□ -1.17
GYPB-213ENST00000513128 KRT24Q2M2I5 525 aa7.73□□□□□ -1.17
GYPB-213ENST00000513128 CHRDL2Q6WN34 429 aa7.73□□□□□ -1.17
GYPB-213ENST00000513128 ADAMTS19Q8TE59 1207 aa7.73□□□□□ -1.17
GYPB-213ENST00000513128 PXYLP1Q8TE99 480 aa7.73□□□□□ -1.17
GYPB-213ENST00000513128 JDP2Q8WYK2 163 aa7.73□□□□□ -1.17
GYPB-213ENST00000513128 RPGRQ92834 1020 aaKnown RBP7.73□□□□□ -1.17
GYPB-213ENST00000513128 CRAMP1Q96RY5 1269 aa7.73□□□□□ -1.17
GYPB-213ENST00000513128 TSPYL4Q9UJ04 414 aa7.73□□□□□ -1.17
GYPB-213ENST00000513128 TRPM7Q96QT4 1865 aa7.72□□□□□ -1.17
GYPB-213ENST00000513128 THSD7BQ9C0I4 1608 aa7.72□□□□□ -1.17
GYPB-213ENST00000513128 RASSF10A6NK89 507 aa7.72□□□□□ -1.17
GYPB-213ENST00000513128 TRAF5O00463 557 aa7.72□□□□□ -1.17
GYPB-213ENST00000513128 NEFMP07197 916 aa7.72□□□□□ -1.17
GYPB-213ENST00000513128 RFX1P22670 979 aa7.72□□□□□ -1.17
GYPB-213ENST00000513128 RIPK4P57078 832 aa7.72□□□□□ -1.17
GYPB-213ENST00000513128 KCNA1Q09470 495 aa7.72□□□□□ -1.17
GYPB-213ENST00000513128 AOC3Q16853 763 aa7.72□□□□□ -1.17
GYPB-213ENST00000513128 SLC10A5Q5PT55 438 aa7.72□□□□□ -1.17
GYPB-213ENST00000513128 CC2D2BQ6DHV5 1058 aa7.72□□□□□ -1.17
GYPB-213ENST00000513128 PNMA8AQ86V59 439 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms