RNA–Protein interactions for RNA: ENST00000512673.1

ALYREF-204, Transcript of Aly/REF export factor, humanhuman

TSL 2

Gene ALYREF, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-204ENST00000512673 TAF7Q15545 349 aaPredicted RBP20.73■□□□□ 0.91
ALYREF-204ENST00000512673 OTOP1Q7RTM1 612 aa20.73■□□□□ 0.91
ALYREF-204ENST00000512673 RBBP6Q7Z6E9 1792 aaKnown RBP20.72■□□□□ 0.91
ALYREF-204ENST00000512673 INTS3Q68E01 1043 aaKnown RBP20.72■□□□□ 0.91
ALYREF-204ENST00000512673 COL4A1P02462 1669 aa20.72■□□□□ 0.91
ALYREF-204ENST00000512673 GPSM2P81274 684 aa20.71■□□□□ 0.91
ALYREF-204ENST00000512673 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.71■□□□□ 0.91
ALYREF-204ENST00000512673 H0YGN5 161 aa20.7■□□□□ 0.9
ALYREF-204ENST00000512673 RANBP2P49792 3224 aaKnown RBP20.7■□□□□ 0.9
ALYREF-204ENST00000512673 ANXA1P04083 346 aa20.69■□□□□ 0.9
ALYREF-204ENST00000512673 VIL1P09327 827 aaKnown RBP20.69■□□□□ 0.9
ALYREF-204ENST00000512673 PRKG1Q13976 671 aa20.69■□□□□ 0.9
ALYREF-204ENST00000512673 CELF1Q92879 486 aaKnown RBP20.69■□□□□ 0.9
ALYREF-204ENST00000512673 COL6A3P12111 3177 aa20.68■□□□□ 0.9
ALYREF-204ENST00000512673 DDX60Q8IY21 1712 aaKnown RBP20.68■□□□□ 0.9
ALYREF-204ENST00000512673 SREBF2Q12772 1141 aa20.68■□□□□ 0.9
ALYREF-204ENST00000512673 KDM3BQ7LBC6 1761 aa20.67■□□□□ 0.9
ALYREF-204ENST00000512673 EIF4A1P60842 406 aaKnown RBP20.67■□□□□ 0.9
ALYREF-204ENST00000512673 CHRDL2Q6WN34 429 aa20.67■□□□□ 0.9
ALYREF-204ENST00000512673 OTUD5Q96G74 571 aa20.67■□□□□ 0.9
ALYREF-204ENST00000512673 TRMT112Q9UI30 125 aaKnown RBP20.67■□□□□ 0.9
ALYREF-204ENST00000512673 ZNF280AP59817 542 aaPredicted RBP20.66■□□□□ 0.9
ALYREF-204ENST00000512673 PTPN12Q05209 780 aaKnown RBP20.66■□□□□ 0.9
ALYREF-204ENST00000512673 NLRP10Q86W26 655 aa20.66■□□□□ 0.9
ALYREF-204ENST00000512673 CFHR5Q9BXR6 569 aa20.66■□□□□ 0.9
ALYREF-204ENST00000512673 PTPN22Q9Y2R2 807 aa20.66■□□□□ 0.9
ALYREF-204ENST00000512673 PER1O15534 1290 aaPredicted RBP20.65■□□□□ 0.9
ALYREF-204ENST00000512673 PROSER3Q2NL68 480 aa20.65■□□□□ 0.9
ALYREF-204ENST00000512673 CD99L2Q8TCZ2 262 aa20.65■□□□□ 0.9
ALYREF-204ENST00000512673 MYOZ2Q9NPC6 264 aa20.65■□□□□ 0.9
ALYREF-204ENST00000512673 FZD1Q9UP38 647 aa20.65■□□□□ 0.9
ALYREF-204ENST00000512673 MYCP01106 439 aaPredicted RBP20.64■□□□□ 0.89
ALYREF-204ENST00000512673 U2AF1L5P0DN76 240 aaPredicted RBP20.64■□□□□ 0.89
ALYREF-204ENST00000512673 U2AF1Q01081 240 aaKnown RBP eCLIP20.64■□□□□ 0.89
ALYREF-204ENST00000512673 CAP1Q01518 475 aa20.64■□□□□ 0.89
ALYREF-204ENST00000512673 TMC4Q7Z404 712 aa20.64■□□□□ 0.89
ALYREF-204ENST00000512673 LRP10Q7Z4F1 713 aa20.64■□□□□ 0.89
ALYREF-204ENST00000512673 TBC1D16Q8TBP0 767 aa20.64■□□□□ 0.89
ALYREF-204ENST00000512673 SH3TC1Q8TE82 1336 aa20.63■□□□□ 0.89
ALYREF-204ENST00000512673 NBPF9Q3BBW0 867 aa20.63■□□□□ 0.89
ALYREF-204ENST00000512673 RSBN1LQ6PCB5 846 aaPredicted RBP20.63■□□□□ 0.89
ALYREF-204ENST00000512673 ARMC5Q96C12 935 aa20.63■□□□□ 0.89
ALYREF-204ENST00000512673 EYA3Q99504 573 aa20.63■□□□□ 0.89
ALYREF-204ENST00000512673 PITPNM2Q9BZ72 1349 aa20.62■□□□□ 0.89
ALYREF-204ENST00000512673 G3V3G9 751 aa20.62■□□□□ 0.89
ALYREF-204ENST00000512673 TCIRG1Q13488 830 aa20.62■□□□□ 0.89
ALYREF-204ENST00000512673 DCAF8Q5TAQ9 597 aa20.62■□□□□ 0.89
ALYREF-204ENST00000512673 TMEM106CQ9BVX2 250 aa20.62■□□□□ 0.89
ALYREF-204ENST00000512673 RBM27Q9P2N5 1060 aaKnown RBP20.62■□□□□ 0.89
ALYREF-204ENST00000512673 USP17L8P0C7I0 530 aa20.61■□□□□ 0.89
ALYREF-204ENST00000512673 EIF2S2P20042 333 aaKnown RBP20.61■□□□□ 0.89
ALYREF-204ENST00000512673 AIMP1Q12904 312 aaKnown RBP20.61■□□□□ 0.89
ALYREF-204ENST00000512673 PDIA6Q15084 440 aa20.61■□□□□ 0.89
ALYREF-204ENST00000512673 SPRYD7Q5W111 196 aa20.61■□□□□ 0.89
ALYREF-204ENST00000512673 ZC3H12CQ9C0D7 883 aaKnown RBP20.61■□□□□ 0.89
ALYREF-204ENST00000512673 HTATSF1O43719 755 aaKnown RBP20.6■□□□□ 0.89
ALYREF-204ENST00000512673 IFNL1Q8IU54 200 aa20.6■□□□□ 0.89
ALYREF-204ENST00000512673 AGBL3Q8NEM8 1001 aa20.6■□□□□ 0.89
ALYREF-204ENST00000512673 ZNF609O15014 1411 aa20.6■□□□□ 0.89
ALYREF-204ENST00000512673 IGF2BP3O00425 579 aaKnown RBP eCLIP20.59■□□□□ 0.89
ALYREF-204ENST00000512673 UFL1O94874 794 aa20.59■□□□□ 0.89
ALYREF-204ENST00000512673 ALDH1A1P00352 501 aa20.58■□□□□ 0.89
ALYREF-204ENST00000512673 NF2P35240 595 aa20.58■□□□□ 0.89
ALYREF-204ENST00000512673 RTL5Q5HYW3 569 aaPredicted RBP20.58■□□□□ 0.89
ALYREF-204ENST00000512673 NECTIN2Q92692 538 aa20.58■□□□□ 0.89
ALYREF-204ENST00000512673 ERO1AQ96HE7 468 aa20.58■□□□□ 0.89
ALYREF-204ENST00000512673 GMLQ99445 158 aa20.58■□□□□ 0.89
ALYREF-204ENST00000512673 MXD3Q9BW11 206 aa20.58■□□□□ 0.89
ALYREF-204ENST00000512673 EFCC1Q9HA90 598 aa20.58■□□□□ 0.89
ALYREF-204ENST00000512673 SLC4A8Q2Y0W8 1093 aa20.57■□□□□ 0.88
ALYREF-204ENST00000512673 COPS6Q7L5N1 327 aa20.57■□□□□ 0.88
ALYREF-204ENST00000512673 PNISRQ8TF01 805 aaKnown RBP20.57■□□□□ 0.88
ALYREF-204ENST00000512673 ZNF333Q96JL9 665 aa20.57■□□□□ 0.88
ALYREF-204ENST00000512673 ANGEL1Q9UNK9 670 aaKnown RBP20.57■□□□□ 0.88
ALYREF-204ENST00000512673 DLG5Q8TDM6 1919 aa20.57■□□□□ 0.88
ALYREF-204ENST00000512673 ERBB4Q15303 1308 aa20.56■□□□□ 0.88
ALYREF-204ENST00000512673 ARMC9Q7Z3E5 817 aa20.56■□□□□ 0.88
ALYREF-204ENST00000512673 XAGE3Q8WTP9 111 aa20.56■□□□□ 0.88
ALYREF-204ENST00000512673 FAM89AQ96GI7 184 aa20.56■□□□□ 0.88
ALYREF-204ENST00000512673 CFAP53Q96M91 514 aa20.56■□□□□ 0.88
ALYREF-204ENST00000512673 PSME4Q14997 1843 aa20.55■□□□□ 0.88
ALYREF-204ENST00000512673 SASH1O94885 1247 aa20.55■□□□□ 0.88
ALYREF-204ENST00000512673 CRHR2Q13324 411 aa20.55■□□□□ 0.88
ALYREF-204ENST00000512673 HSP90AB3PQ58FF7 597 aa20.55■□□□□ 0.88
ALYREF-204ENST00000512673 NUDCQ9Y266 331 aa20.55■□□□□ 0.88
ALYREF-204ENST00000512673 MANSC4A6NHS7 340 aaPredicted RBP20.54■□□□□ 0.88
ALYREF-204ENST00000512673 CLMNQ96JQ2 1002 aa20.54■□□□□ 0.88
ALYREF-204ENST00000512673 ANKIB1Q9P2G1 1089 aa20.54■□□□□ 0.88
ALYREF-204ENST00000512673 TIMELESSQ9UNS1 1208 aa20.54■□□□□ 0.88
ALYREF-204ENST00000512673 SF3B3Q15393 1217 aaKnown RBP20.53■□□□□ 0.88
ALYREF-204ENST00000512673 LDLRAD1Q5T700 205 aa20.53■□□□□ 0.88
ALYREF-204ENST00000512673 PTCH2Q9Y6C5 1203 aa20.53■□□□□ 0.88
ALYREF-204ENST00000512673 WTIPA6NIX2 430 aaPredicted RBP20.52■□□□□ 0.88
ALYREF-204ENST00000512673 WNT10BO00744 389 aa20.52■□□□□ 0.88
ALYREF-204ENST00000512673 RPS8P62241 208 aaKnown RBP20.52■□□□□ 0.88
ALYREF-204ENST00000512673 SLC9C1Q4G0N8 1177 aa20.52■□□□□ 0.88
ALYREF-204ENST00000512673 SEC31BQ9NQW1 1179 aa20.52■□□□□ 0.88
ALYREF-204ENST00000512673 GGA1Q9UJY5 639 aa20.52■□□□□ 0.88
ALYREF-204ENST00000512673 LAMA3Q16787 3333 aa20.52■□□□□ 0.88
ALYREF-204ENST00000512673 USP17L3A6NCW0 530 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms