RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 PDGFDQ9GZP0 370 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-210ENST00000507965 EVC2Q86UK5 1308 aa7.96□□□□□ -1.14
ATXN3-210ENST00000507965 LY75O60449 1722 aa7.95□□□□□ -1.14
ATXN3-210ENST00000507965 COL24A1Q17RW2 1714 aa7.95□□□□□ -1.14
ATXN3-210ENST00000507965 KIF20BQ96Q89 1820 aa7.95□□□□□ -1.14
ATXN3-210ENST00000507965 DDB1Q16531 1140 aa7.95□□□□□ -1.14
ATXN3-210ENST00000507965 MARCH10Q8NA82 808 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-210ENST00000507965 TTC21BQ7Z4L5 1316 aa7.95□□□□□ -1.14
ATXN3-210ENST00000507965 KTN1Q86UP2 1357 aaKnown RBP7.95□□□□□ -1.14
ATXN3-210ENST00000507965 BCL9O00512 1426 aa7.95□□□□□ -1.14
ATXN3-210ENST00000507965 ARHGEF25Q86VW2 580 aa7.94□□□□□ -1.14
ATXN3-210ENST00000507965 ZNF395Q9H8N7 513 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-210ENST00000507965 NINLQ9Y2I6 1382 aa7.94□□□□□ -1.14
ATXN3-210ENST00000507965 CHD4Q14839 1912 aa7.93□□□□□ -1.14
ATXN3-210ENST00000507965 KCNQ2O43526 872 aa7.93□□□□□ -1.14
ATXN3-210ENST00000507965 CLK2P49760 499 aaKnown RBP7.93□□□□□ -1.14
ATXN3-210ENST00000507965 RNF217Q8TC41 542 aa7.93□□□□□ -1.14
ATXN3-210ENST00000507965 SPON1Q9HCB6 807 aa7.93□□□□□ -1.14
ATXN3-210ENST00000507965 TTC21AQ8NDW8 1320 aa7.93□□□□□ -1.14
ATXN3-210ENST00000507965 SBNO2Q9Y2G9 1366 aa7.93□□□□□ -1.14
ATXN3-210ENST00000507965 PLSCR1O15162 318 aa7.92□□□□□ -1.14
ATXN3-210ENST00000507965 CSB-PGBD3P0DP91 1061 aa7.92□□□□□ -1.14
ATXN3-210ENST00000507965 SRSF11Q05519 484 aaKnown RBP7.92□□□□□ -1.14
ATXN3-210ENST00000507965 CTDSPL2Q05D32 466 aa7.92□□□□□ -1.14
ATXN3-210ENST00000507965 NEUROD1Q13562 356 aa7.92□□□□□ -1.14
ATXN3-210ENST00000507965 INTS6LQ5JSJ4 861 aaKnown RBP7.92□□□□□ -1.14
ATXN3-210ENST00000507965 LYPD4Q6UWN0 246 aa7.92□□□□□ -1.14
ATXN3-210ENST00000507965 PPP1R1BQ9UD71 204 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-210ENST00000507965 FKBPLQ9UIM3 349 aa7.92□□□□□ -1.14
ATXN3-210ENST00000507965 ZBTB7AO95365 584 aa7.91□□□□□ -1.14
ATXN3-210ENST00000507965 YY1P25490 414 aa7.91□□□□□ -1.14
ATXN3-210ENST00000507965 NME9Q86XW9 330 aa7.91□□□□□ -1.14
ATXN3-210ENST00000507965 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.91□□□□□ -1.14
ATXN3-210ENST00000507965 KCNH5Q8NCM2 988 aa7.91□□□□□ -1.14
ATXN3-210ENST00000507965 CARD10Q9BWT7 1032 aa7.91□□□□□ -1.14
ATXN3-210ENST00000507965 ENAMQ9NRM1 1142 aa7.91□□□□□ -1.14
ATXN3-210ENST00000507965 A0A1W2PP64 1363 aa7.91□□□□□ -1.14
ATXN3-210ENST00000507965 USP31Q70CQ4 1352 aa7.91□□□□□ -1.14
ATXN3-210ENST00000507965 CCDC7Q96M83 1385 aa7.91□□□□□ -1.14
ATXN3-210ENST00000507965 C5P01031 1676 aa7.91□□□□□ -1.14
ATXN3-210ENST00000507965 TOGARAM1Q9Y4F4 1720 aa7.91□□□□□ -1.14
ATXN3-210ENST00000507965 KAT6BQ8WYB5 2073 aa7.9□□□□□ -1.14
ATXN3-210ENST00000507965 TAF1LQ8IZX4 1826 aa7.9□□□□□ -1.14
ATXN3-210ENST00000507965 EDC4Q6P2E9 1401 aaKnown RBP7.9□□□□□ -1.14
ATXN3-210ENST00000507965 PDE4DQ08499 809 aa7.9□□□□□ -1.14
ATXN3-210ENST00000507965 ACSBG1Q96GR2 724 aa7.9□□□□□ -1.14
ATXN3-210ENST00000507965 RSPH6AQ9H0K4 717 aa7.9□□□□□ -1.14
ATXN3-210ENST00000507965 POLR3EQ9NVU0 708 aa7.9□□□□□ -1.14
ATXN3-210ENST00000507965 ZC3H4Q9UPT8 1303 aaKnown RBP7.89□□□□□ -1.15
ATXN3-210ENST00000507965 SENP3-EIF4A1A0A087X0R7 540 aa7.89□□□□□ -1.15
ATXN3-210ENST00000507965 CELA2BP08218 269 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-210ENST00000507965 PTK2Q05397 1052 aa7.89□□□□□ -1.15
ATXN3-210ENST00000507965 TXNRD1Q16881 649 aa7.89□□□□□ -1.15
ATXN3-210ENST00000507965 CDCA7Q9BWT1 371 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-210ENST00000507965 ITGB4P16144 1822 aa7.89□□□□□ -1.15
ATXN3-210ENST00000507965 ANKRD26Q9UPS8 1709 aa7.89□□□□□ -1.15
ATXN3-210ENST00000507965 RAB15P59190 212 aa7.88□□□□□ -1.15
ATXN3-210ENST00000507965 NBPF20Q3BBV1 942 aa7.88□□□□□ -1.15
ATXN3-210ENST00000507965 LRRN4Q8WUT4 740 aa7.88□□□□□ -1.15
ATXN3-210ENST00000507965 TMPRSS4Q9NRS4 437 aa7.88□□□□□ -1.15
ATXN3-210ENST00000507965 MEGF6O75095 1541 aa7.88□□□□□ -1.15
ATXN3-210ENST00000507965 PKD1L3Q7Z443 1732 aa7.87□□□□□ -1.15
ATXN3-210ENST00000507965 PHF20L1A8MW92 1017 aa7.87□□□□□ -1.15
ATXN3-210ENST00000507965 EXOC5O00471 708 aa7.87□□□□□ -1.15
ATXN3-210ENST00000507965 ADH1AP07327 375 aa7.87□□□□□ -1.15
ATXN3-210ENST00000507965 NR6A1Q15406 480 aa7.87□□□□□ -1.15
ATXN3-210ENST00000507965 SLC15A2Q16348 729 aa7.87□□□□□ -1.15
ATXN3-210ENST00000507965 ZNF827Q17R98 1081 aa7.87□□□□□ -1.15
ATXN3-210ENST00000507965 LYSMD3Q7Z3D4 306 aa7.87□□□□□ -1.15
ATXN3-210ENST00000507965 TMC1Q8TDI8 760 aa7.87□□□□□ -1.15
ATXN3-210ENST00000507965 ANKRD24Q8TF21 1146 aa7.87□□□□□ -1.15
ATXN3-210ENST00000507965 NLRP2Q9NX02 1062 aa7.87□□□□□ -1.15
ATXN3-210ENST00000507965 STK32BQ9NY57 414 aa7.87□□□□□ -1.15
ATXN3-210ENST00000507965 MSTNO14793 375 aa7.86□□□□□ -1.15
ATXN3-210ENST00000507965 IL2RBP14784 551 aa7.86□□□□□ -1.15
ATXN3-210ENST00000507965 TMEM132AQ24JP5 1023 aa7.86□□□□□ -1.15
ATXN3-210ENST00000507965 FOXD4L5Q5VV16 416 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-210ENST00000507965 ZNF784Q8NCA9 323 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-210ENST00000507965 ADAM32Q8TC27 787 aa7.86□□□□□ -1.15
ATXN3-210ENST00000507965 CARD11Q9BXL7 1154 aa7.86□□□□□ -1.15
ATXN3-210ENST00000507965 FHDC1Q9C0D6 1143 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-210ENST00000507965 SLC12A5Q9H2X9 1139 aa7.86□□□□□ -1.15
ATXN3-210ENST00000507965 NSD2O96028 1365 aa7.85□□□□□ -1.15
ATXN3-210ENST00000507965 PTGIRP43119 386 aa7.85□□□□□ -1.15
ATXN3-210ENST00000507965 GAS6Q14393 721 aa7.85□□□□□ -1.15
ATXN3-210ENST00000507965 FOXR1Q6PIV2 292 aa7.85□□□□□ -1.15
ATXN3-210ENST00000507965 LRRC4BQ9NT99 713 aa7.85□□□□□ -1.15
ATXN3-210ENST00000507965 GPSM3Q9Y4H4 160 aa7.85□□□□□ -1.15
ATXN3-210ENST00000507965 TONSLQ96HA7 1378 aa7.84□□□□□ -1.15
ATXN3-210ENST00000507965 UBR3Q6ZT12 1888 aa7.84□□□□□ -1.15
ATXN3-210ENST00000507965 FBLN1P23142 703 aa7.84□□□□□ -1.15
ATXN3-210ENST00000507965 HDGFL2Q7Z4V5 671 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-210ENST00000507965 PODNQ7Z5L7 613 aa7.84□□□□□ -1.15
ATXN3-210ENST00000507965 LTV1Q96GA3 475 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-210ENST00000507965 MTFR1LQ9H019 292 aa7.84□□□□□ -1.15
ATXN3-210ENST00000507965 MBIPQ9NS73 344 aa7.84□□□□□ -1.15
ATXN3-210ENST00000507965 CUEDC1Q9NWM3 386 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-210ENST00000507965 MAP3K19Q56UN5 1328 aa7.83□□□□□ -1.16
ATXN3-210ENST00000507965 CNTNAP5Q8WYK1 1306 aa7.83□□□□□ -1.16
ATXN3-210ENST00000507965 ERVH48-1M5A8F1 160 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms