RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ZNF784Q8NCA9 323 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 TRIM56Q9BRZ2 755 aaKnown RBP4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 ZFYVE28Q9HCC9 887 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 ACTR10Q9NZ32 417 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 UBP1Q9NZI7 540 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 SUPT16HQ9Y5B9 1047 aaKnown RBP4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 USP3Q9Y6I4 520 aa4.77□□□□□ -1.65
HMGB1P22-201ENST00000505315 UBAP1LF5GYI3 381 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 KIF3BO15066 747 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 CAND2O75155 1236 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 MICAL2O94851 1124 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 LMNB1P20700 586 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 FCGRTP55899 365 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 EXOSC10Q01780 885 aaKnown RBP4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 SQSTM1Q13501 440 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 TEAD4Q15561 434 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 DDR2Q16832 855 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 MAP9Q49MG5 647 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 BRDTQ58F21 947 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 PCNX4Q63HM2 1172 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 JAMLQ86YT9 394 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 TEX2Q8IWB9 1127 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 RAVER1Q8IY67 606 aaKnown RBP4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 GOLM1Q8NBJ4 401 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 CHAC2Q8WUX2 184 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 EMID1Q96A84 441 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 FERD3LQ96RJ6 166 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 PCGF6Q9BYE7 350 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 EHD4Q9H223 541 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 SCUBE2Q9NQ36 999 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 CNTN3Q9P232 1028 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 PNMA2Q9UL42 364 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 PPT2Q9UMR5 302 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 MAPK8IP1Q9UQF2 711 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 ATP8A1Q9Y2Q0 1164 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 CD2APQ9Y5K6 639 aa4.76□□□□□ -1.65
HMGB1P22-201ENST00000505315 KDM2BQ8NHM5 1336 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 SOWAHBA6NEL2 793 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 TLR3O15455 904 aaKnown RBP4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 FBXO24O75426 580 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 DDAH1O94760 285 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 RLBP1P12271 317 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 MYCLP1P12525 358 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 ATF3P18847 181 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 CDKN1CP49918 316 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 UBE4AQ14139 1066 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 GRM2Q14416 872 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 MTFR1Q15390 333 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 SEZ6Q53EL9 994 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 FBXL19Q6PCT2 694 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 ATL2Q8NHH9 583 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 RHPN1Q8TCX5 695 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 CNKSR1Q969H4 720 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 EVI5LQ96CN4 794 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 NT5C1AQ9BXI3 368 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 TMEM260Q9NX78 707 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 MCM8Q9UJA3 840 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 USP20Q9Y2K6 914 aa4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 THRAP3Q9Y2W1 955 aaKnown RBP4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 FCF1Q9Y324 198 aaKnown RBP4.75□□□□□ -1.65
HMGB1P22-201ENST00000505315 BHMG1C9JSJ3 638 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 ALDH1L1O75891 902 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 PF4P02776 101 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 PBX2P40425 430 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 WNT7BP56706 349 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 NFKB2Q00653 900 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 SSRP1Q08945 709 aaKnown RBP4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 RASGRF1Q13972 1273 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 ZRSR2Q15696 482 aaKnown RBP4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 FXNQ16595 210 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 LONRF3Q496Y0 759 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 C2orf27AQ580R0 203 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 WWC2Q6AWC2 1192 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 CCSAPQ6IQ19 270 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 TMEM214Q6NUQ4 689 aaKnown RBP4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 POTEEQ6S8J3 1075 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 DTHD1Q6ZMT9 781 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 UBR7Q8N806 425 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 THAP3Q8WTV1 239 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 WNT2BQ93097 391 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 AIDAQ96BJ3 306 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 XAGE2Q96GT9 111 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 NLRP3Q96P20 1036 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 SUV39H2Q9H5I1 410 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 ELP3Q9H9T3 547 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 TRAK1Q9UPV9 953 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 PTCH2Q9Y6C5 1203 aa4.74□□□□□ -1.65
HMGB1P22-201ENST00000505315 CCDC189A1A4V9 331 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 ALG1L2C9J202 215 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 MEN1O00255 615 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 PPFIA4O75335 1185 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 LDHAP00338 332 aaKnown RBP4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 IL2RAP01589 272 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 VARSP26640 1264 aaKnown RBP4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 GNALP38405 381 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 HIF1AQ16665 826 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 SYCP2LQ5T4T6 812 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 DIEXFQ68CQ4 756 aaKnown RBP4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 SLC4A10Q6U841 1118 aa4.73□□□□□ -1.65
HMGB1P22-201ENST00000505315 KSR2Q6VAB6 950 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms