RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ZIM2Q9NZV7 527 aa6.59□□□□□ -1.36
NIPBL-204ENST00000504430 TLR6Q9Y2C9 796 aa6.59□□□□□ -1.36
NIPBL-204ENST00000504430 SLC4A3P48751 1232 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 POU5F1BQ06416 359 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 CCDC93Q567U6 631 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 FRMD4BQ9Y2L6 1034 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 USP31Q70CQ4 1352 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 SLC26A4O43511 780 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 PIP5K1CO60331 668 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 PDGFAP04085 211 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 POLR3DP05423 398 aaPredicted RBP6.58□□□□□ -1.36
NIPBL-204ENST00000504430 POU5F1Q01860 360 aaKnown RBP6.58□□□□□ -1.36
NIPBL-204ENST00000504430 MCL1Q07820 350 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 PTPRNQ16849 979 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 KIAA0825Q8IV33 1275 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 MYRIPQ8NFW9 859 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 SVIPQ8NHG7 77 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 SIRPGQ9P1W8 387 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 SPG7Q9UQ90 795 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 PARP3Q9Y6F1 533 aa6.58□□□□□ -1.36
NIPBL-204ENST00000504430 FOXO3O43524 673 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 RGS20O76081 388 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 GPSM2P81274 684 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 VPS37AQ8NEZ2 397 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 CPLX3Q8WVH0 158 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 FOXJ1Q92949 421 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 CCDC8Q9H0W5 538 aaPredicted RBP6.57□□□□□ -1.36
NIPBL-204ENST00000504430 JADE2Q9NQC1 790 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 CCNYL3P0C7X3 344 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 Q3C1V9 767 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 CDC5LQ99459 802 aaKnown RBP6.57□□□□□ -1.36
NIPBL-204ENST00000504430 HDAC9Q9UKV0 1011 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 NR1I2O75469 434 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 ZAP70P43403 619 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 EPHA4P54764 986 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 RASGRP4Q8TDF6 673 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 E2F7Q96AV8 911 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 TIFAQ96CG3 184 aa6.57□□□□□ -1.36
NIPBL-204ENST00000504430 WASLO00401 505 aaPredicted RBP6.56□□□□□ -1.36
NIPBL-204ENST00000504430 TIMM44O43615 452 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 FBXL19Q6PCT2 694 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 SH3BP5LQ7L8J4 393 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 SCUBE3Q8IX30 993 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 FEZ1Q99689 392 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 NPHS2Q9NP85 383 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 EVA1BQ9NVM1 165 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 SLC45A1Q9Y2W3 748 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 B2RBV5 119 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 TGFB3P10600 412 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 MYCLP1P12525 358 aaPredicted RBP6.56□□□□□ -1.36
NIPBL-204ENST00000504430 PPP4R3BQ5MIZ7 849 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 BRICD5Q6PL45 260 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 TTC8Q8TAM2 541 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 GJA3Q9Y6H8 435 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 PLIN1O60240 522 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 RNASEH2AO75792 299 aaKnown RBP6.56□□□□□ -1.36
NIPBL-204ENST00000504430 CT47B1P0C2W7 299 aaPredicted RBP6.56□□□□□ -1.36
NIPBL-204ENST00000504430 NBPF20Q3BBV1 942 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 NBPF6Q5VWK0 638 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 IL31Q6EBC2 164 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 GPR153Q6NV75 609 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 HOMER1Q86YM7 354 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 CCDC24Q8N4L8 307 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 SAMD3Q8N6K7 520 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 COL26A1Q96A83 441 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 NBPF4Q96M43 638 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 RSPH9Q9H1X1 276 aaPredicted RBP6.56□□□□□ -1.36
NIPBL-204ENST00000504430 TNKS2Q9H2K2 1166 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 TMX1Q9H3N1 280 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 TMEM260Q9NX78 707 aa6.56□□□□□ -1.36
NIPBL-204ENST00000504430 hCG_1984214I3L0E3 225 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 RAPGEF1Q13905 1077 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 RNF20Q5VTR2 975 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 CHPFQ8IZ52 775 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 KLRG1Q96E93 195 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 GEMIN8Q9NWZ8 242 aaKnown RBP6.55□□□□□ -1.36
NIPBL-204ENST00000504430 CAND2O75155 1236 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 JUNDP17535 347 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 SCP2P22307 547 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 NEK3P51956 506 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 GDF10P55107 478 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 DGKZQ13574 1117 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 C2orf49Q9BVC5 232 aaPredicted RBP6.55□□□□□ -1.36
NIPBL-204ENST00000504430 RBSNQ9H1K0 784 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 SH3BP1Q9Y3L3 701 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 R3HCC1Q9Y3T6 440 aaKnown RBP6.55□□□□□ -1.36
NIPBL-204ENST00000504430 GPSM3Q9Y4H4 160 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 C19orf67A6NJJ6 358 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 TCERG1O14776 1098 aaKnown RBP6.55□□□□□ -1.36
NIPBL-204ENST00000504430 KIF3BO15066 747 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 MYL1P05976 194 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 GRAMD1BQ3KR37 738 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 NBPF14Q5TI25 921 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 FBXW10Q5XX13 1052 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 C16orf86Q6ZW13 317 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 PLD4Q96BZ4 506 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 MAPK8IP1Q9UQF2 711 aa6.55□□□□□ -1.36
NIPBL-204ENST00000504430 GBP2P32456 591 aaPredicted RBP6.54□□□□□ -1.36
NIPBL-204ENST00000504430 MAPRE1Q15691 268 aaKnown RBP6.54□□□□□ -1.36
NIPBL-204ENST00000504430 LARP1BQ659C4 914 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms