RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 FOXD4L3Q6VB84 417 aaPredicted RBP6.99□□□□□ -1.29
SMN2-204ENST00000503678 EIF1AYO14602 144 aaKnown RBP6.98□□□□□ -1.29
SMN2-204ENST00000503678 HMGB1P09429 215 aaKnown RBP6.98□□□□□ -1.29
SMN2-204ENST00000503678 C4orf17Q53FE4 359 aa6.98□□□□□ -1.29
SMN2-204ENST00000503678 GPR152Q8TDT2 470 aa6.98□□□□□ -1.29
SMN2-204ENST00000503678 NUDT16Q96DE0 195 aaKnown RBP6.98□□□□□ -1.29
SMN2-204ENST00000503678 CRELD1Q96HD1 420 aa6.98□□□□□ -1.29
SMN2-204ENST00000503678 RUBCNLQ9H714 662 aa6.98□□□□□ -1.29
SMN2-204ENST00000503678 GPC6Q9Y625 555 aaPredicted RBP6.98□□□□□ -1.29
SMN2-204ENST00000503678 AK5Q9Y6K8 562 aa6.98□□□□□ -1.29
SMN2-204ENST00000503678 MSX1P28360 303 aa6.97□□□□□ -1.29
SMN2-204ENST00000503678 RSPO4Q2I0M5 234 aaPredicted RBP6.97□□□□□ -1.29
SMN2-204ENST00000503678 NKAPLQ5M9Q1 402 aa6.97□□□□□ -1.29
SMN2-204ENST00000503678 SLC43A3Q8NBI5 491 aa6.97□□□□□ -1.29
SMN2-204ENST00000503678 CCSER2Q9H7U1 834 aa6.97□□□□□ -1.29
SMN2-204ENST00000503678 PPP1R1BQ9UD71 204 aaPredicted RBP6.97□□□□□ -1.29
SMN2-204ENST00000503678 SPG7Q9UQ90 795 aa6.97□□□□□ -1.29
SMN2-204ENST00000503678 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 TGFBR3LH3BV60 316 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 MICAL2O94851 1124 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 ARAFP10398 606 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 CTBSQ01459 385 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 ORC1Q13415 861 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 NBPF1Q3BBV0 1214 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 C8orf34Q49A92 452 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 IER5Q5VY09 327 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 TINF2Q9BSI4 451 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 GGNBP2Q9H3C7 697 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 ZDHHC3Q9NYG2 299 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 BCS1LQ9Y276 419 aa6.96□□□□□ -1.3
SMN2-204ENST00000503678 CPNE3O75131 537 aaKnown RBP6.95□□□□□ -1.3
SMN2-204ENST00000503678 FGFR3P22607 806 aa6.95□□□□□ -1.3
SMN2-204ENST00000503678 TXLNAP40222 546 aa6.95□□□□□ -1.3
SMN2-204ENST00000503678 NBPF11Q86T75 865 aa6.95□□□□□ -1.3
SMN2-204ENST00000503678 RHPN1Q8TCX5 695 aa6.95□□□□□ -1.3
SMN2-204ENST00000503678 NDFIP2Q9NV92 336 aa6.95□□□□□ -1.3
SMN2-204ENST00000503678 NLRP2Q9NX02 1062 aa6.95□□□□□ -1.3
SMN2-204ENST00000503678 GIPC1O14908 333 aa6.94□□□□□ -1.3
SMN2-204ENST00000503678 BNIP3LO60238 219 aa6.94□□□□□ -1.3
SMN2-204ENST00000503678 EIF4BP23588 611 aaKnown RBP6.94□□□□□ -1.3
SMN2-204ENST00000503678 CANXP27824 592 aaKnown RBP6.94□□□□□ -1.3
SMN2-204ENST00000503678 PLA2G4AP47712 749 aa6.94□□□□□ -1.3
SMN2-204ENST00000503678 GNL2Q13823 731 aaKnown RBP6.94□□□□□ -1.3
SMN2-204ENST00000503678 XKR5Q6UX68 686 aa6.94□□□□□ -1.3
SMN2-204ENST00000503678 CHSY3Q70JA7 882 aa6.94□□□□□ -1.3
SMN2-204ENST00000503678 KRTAP19-1Q8IUB9 90 aa6.94□□□□□ -1.3
SMN2-204ENST00000503678 FAM177A1Q8N128 213 aaPredicted RBP6.94□□□□□ -1.3
SMN2-204ENST00000503678 C7orf43Q8WVR3 580 aa6.94□□□□□ -1.3
SMN2-204ENST00000503678 AIDAQ96BJ3 306 aa6.94□□□□□ -1.3
SMN2-204ENST00000503678 PUS7Q96PZ0 661 aaKnown RBP6.94□□□□□ -1.3
SMN2-204ENST00000503678 TANGO6Q9C0B7 1094 aa6.94□□□□□ -1.3
SMN2-204ENST00000503678 NEURL1BA8MQ27 555 aa6.93□□□□□ -1.3
SMN2-204ENST00000503678 CTSHP09668 335 aa6.93□□□□□ -1.3
SMN2-204ENST00000503678 SPATA31C1P0DKV0 1188 aa6.93□□□□□ -1.3
SMN2-204ENST00000503678 TATP17735 454 aaPredicted RBP6.93□□□□□ -1.3
SMN2-204ENST00000503678 FIGNL1Q6PIW4 674 aa6.93□□□□□ -1.3
SMN2-204ENST00000503678 ABHD17AQ96GS6 310 aa6.93□□□□□ -1.3
SMN2-204ENST00000503678 GOLGA2P5Q9HBQ8 144 aa6.93□□□□□ -1.3
SMN2-204ENST00000503678 ANKIB1Q9P2G1 1089 aa6.93□□□□□ -1.3
SMN2-204ENST00000503678 FNDC3AQ9Y2H6 1198 aaKnown RBP6.93□□□□□ -1.3
SMN2-204ENST00000503678 OPLAHO14841 1288 aa6.92□□□□□ -1.3
SMN2-204ENST00000503678 HSP90B1P14625 803 aaKnown RBP6.92□□□□□ -1.3
SMN2-204ENST00000503678 SUSD3Q96L08 255 aa6.92□□□□□ -1.3
SMN2-204ENST00000503678 PLVAPQ9BX97 442 aa6.92□□□□□ -1.3
SMN2-204ENST00000503678 CAPN10Q9HC96 672 aa6.92□□□□□ -1.3
SMN2-204ENST00000503678 DMGDHQ9UI17 866 aaKnown RBP6.92□□□□□ -1.3
SMN2-204ENST00000503678 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.92□□□□□ -1.3
SMN2-204ENST00000503678 DYRK3O43781 588 aa6.91□□□□□ -1.3
SMN2-204ENST00000503678 IDH3AP50213 366 aa6.91□□□□□ -1.3
SMN2-204ENST00000503678 ARSDP51689 593 aa6.91□□□□□ -1.3
SMN2-204ENST00000503678 PTPN12Q05209 780 aaKnown RBP6.91□□□□□ -1.3
SMN2-204ENST00000503678 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMN2-204ENST00000503678 PDE12Q6L8Q7 609 aaKnown RBP6.91□□□□□ -1.3
SMN2-204ENST00000503678 SNX29Q8TEQ0 813 aa6.91□□□□□ -1.3
SMN2-204ENST00000503678 ARMC5Q96C12 935 aa6.91□□□□□ -1.3
SMN2-204ENST00000503678 TRIM11Q96F44 468 aa6.91□□□□□ -1.3
SMN2-204ENST00000503678 CRISPLD1Q9H336 500 aa6.91□□□□□ -1.3
SMN2-204ENST00000503678 C12orf49Q9H741 205 aa6.91□□□□□ -1.3
SMN2-204ENST00000503678 TPSG1Q9NRR2 321 aa6.91□□□□□ -1.3
SMN2-204ENST00000503678 A6NHS1 94 aa6.9□□□□□ -1.3
SMN2-204ENST00000503678 TNFRSF21O75509 655 aa6.9□□□□□ -1.3
SMN2-204ENST00000503678 ARSJQ5FYB0 599 aaPredicted RBP6.9□□□□□ -1.3
SMN2-204ENST00000503678 ZNF654Q8IZM8 581 aa6.9□□□□□ -1.3
SMN2-204ENST00000503678 CCDC74AQ96AQ1 378 aa6.9□□□□□ -1.3
SMN2-204ENST00000503678 GMLQ99445 158 aa6.9□□□□□ -1.3
SMN2-204ENST00000503678 SRCIN1Q9C0H9 1055 aa6.9□□□□□ -1.3
SMN2-204ENST00000503678 ACBD3Q9H3P7 528 aa6.9□□□□□ -1.3
SMN2-204ENST00000503678 PRKAG2Q9UGJ0 569 aa6.9□□□□□ -1.3
SMN2-204ENST00000503678 ATP2B1P20020 1258 aa6.89□□□□□ -1.31
SMN2-204ENST00000503678 ADH6P28332 368 aa6.89□□□□□ -1.31
SMN2-204ENST00000503678 INPP5BP32019 993 aa6.89□□□□□ -1.31
SMN2-204ENST00000503678 HS2ST1Q7LGA3 356 aa6.89□□□□□ -1.31
SMN2-204ENST00000503678 ZNF438Q7Z4V0 828 aa6.89□□□□□ -1.31
SMN2-204ENST00000503678 SPATA32Q96LK8 384 aa6.89□□□□□ -1.31
SMN2-204ENST00000503678 ZFYVE28Q9HCC9 887 aa6.89□□□□□ -1.31
SMN2-204ENST00000503678 FAM8A1Q9UBU6 413 aa6.89□□□□□ -1.31
SMN2-204ENST00000503678 DDX41Q9UJV9 622 aaKnown RBP6.89□□□□□ -1.31
SMN2-204ENST00000503678 PCDHGC4Q9Y5F7 938 aa6.89□□□□□ -1.31
SMN2-204ENST00000503678 USP31Q70CQ4 1352 aa6.89□□□□□ -1.31
SMN2-204ENST00000503678 ATXN7O15265 892 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms