RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 TFCP2Q12800 502 aa28.82■■■□□ 2.2
DDX41-202ENST00000503078 IQCB1Q15051 598 aa28.82■■■□□ 2.2
DDX41-202ENST00000503078 MCMDC2Q4G0Z9 681 aa28.82■■■□□ 2.2
DDX41-202ENST00000503078 CCDC129Q6ZRS4 1044 aa28.82■■■□□ 2.2
DDX41-202ENST00000503078 CAMTA1Q9Y6Y1 1673 aa28.82■■■□□ 2.2
DDX41-202ENST00000503078 ZNF790Q6PG37 636 aa28.81■■■□□ 2.2
DDX41-202ENST00000503078 SARM1Q6SZW1 724 aa28.81■■■□□ 2.2
DDX41-202ENST00000503078 GOLGA6L19H0YKK7 550 aa28.81■■■□□ 2.2
DDX41-202ENST00000503078 PTPN12Q05209 780 aaKnown RBP28.81■■■□□ 2.2
DDX41-202ENST00000503078 CCDC144BQ3MJ40 725 aa28.81■■■□□ 2.2
DDX41-202ENST00000503078 CCDC144CPQ8IYA2 1237 aa28.81■■■□□ 2.2
DDX41-202ENST00000503078 SLIT3O75094 1523 aa28.8■■■□□ 2.2
DDX41-202ENST00000503078 CTAGE5O15320 804 aa28.8■■■□□ 2.2
DDX41-202ENST00000503078 ADD1P35611 737 aaKnown RBP28.8■■■□□ 2.2
DDX41-202ENST00000503078 COPS6Q7L5N1 327 aa28.8■■■□□ 2.2
DDX41-202ENST00000503078 ORAI2Q96SN7 254 aa28.8■■■□□ 2.2
DDX41-202ENST00000503078 SEC62Q99442 399 aaKnown RBP28.8■■■□□ 2.2
DDX41-202ENST00000503078 PAXBP1Q9Y5B6 917 aa28.8■■■□□ 2.2
DDX41-202ENST00000503078 NDUFB9Q9Y6M9 179 aa28.8■■■□□ 2.2
DDX41-202ENST00000503078 C5P01031 1676 aa28.8■■■□□ 2.2
DDX41-202ENST00000503078 NCBP1Q09161 790 aaKnown RBP28.8■■■□□ 2.2
DDX41-202ENST00000503078 DNAJC2Q99543 621 aaKnown RBP28.8■■■□□ 2.2
DDX41-202ENST00000503078 PFKFB2O60825 505 aa28.79■■■□□ 2.2
DDX41-202ENST00000503078 NAA16Q6N069 864 aaPredicted RBP28.79■■■□□ 2.2
DDX41-202ENST00000503078 RCOR1Q9UKL0 485 aa28.79■■■□□ 2.2
DDX41-202ENST00000503078 SLC39A6Q13433 755 aa28.79■■■□□ 2.2
DDX41-202ENST00000503078 HAUS7Q99871 368 aa28.79■■■□□ 2.2
DDX41-202ENST00000503078 CHGBP05060 677 aa28.78■■■□□ 2.2
DDX41-202ENST00000503078 FGD1P98174 961 aa28.78■■■□□ 2.2
DDX41-202ENST00000503078 CEBPZQ03701 1054 aaKnown RBP28.78■■■□□ 2.2
DDX41-202ENST00000503078 STX1AQ16623 288 aa28.78■■■□□ 2.2
DDX41-202ENST00000503078 MYH15Q9Y2K3 1946 aa28.78■■■□□ 2.2
DDX41-202ENST00000503078 HMGB1P09429 215 aaKnown RBP28.77■■■□□ 2.2
DDX41-202ENST00000503078 U2AF2P26368 475 aaKnown RBP eCLIP28.77■■■□□ 2.22e-13■■□□□ 14.3
DDX41-202ENST00000503078 TPD52L1Q16890 204 aaPredicted RBP28.77■■■□□ 2.2
DDX41-202ENST00000503078 C11orf57Q6ZUT1 292 aaPredicted RBP28.77■■■□□ 2.2
DDX41-202ENST00000503078 CCAR1Q8IX12 1150 aaKnown RBP28.77■■■□□ 2.2
DDX41-202ENST00000503078 MRFAP1L1Q96HT8 127 aa28.77■■■□□ 2.2
DDX41-202ENST00000503078 LRRC2Q9BYS8 371 aa28.77■■■□□ 2.2
DDX41-202ENST00000503078 NSUN7Q8NE18 718 aaKnown RBP28.77■■■□□ 2.2
DDX41-202ENST00000503078 DBNDD2Q9BQY9 259 aa28.77■■■□□ 2.2
DDX41-202ENST00000503078 SPDYE4A6NLX3 237 aa28.76■■■□□ 2.19
DDX41-202ENST00000503078 RABL6Q3YEC7 729 aaPredicted RBP28.76■■■□□ 2.19
DDX41-202ENST00000503078 STOX1Q6ZVD7 989 aa28.76■■■□□ 2.19
DDX41-202ENST00000503078 LRRC8AQ8IWT6 810 aa28.76■■■□□ 2.19
DDX41-202ENST00000503078 GTPBP4Q9BZE4 634 aaKnown RBP28.76■■■□□ 2.19
DDX41-202ENST00000503078 NEMFO60524 1076 aa28.75■■■□□ 2.19
DDX41-202ENST00000503078 ANKRD13DQ6ZTN6 518 aa28.75■■■□□ 2.19
DDX41-202ENST00000503078 AXIN2Q9Y2T1 843 aa28.75■■■□□ 2.19
DDX41-202ENST00000503078 DHX32Q7L7V1 743 aaKnown RBP28.75■■■□□ 2.19
DDX41-202ENST00000503078 SH3TC1Q8TE82 1336 aa28.74■■■□□ 2.19
DDX41-202ENST00000503078 DDX46Q7L014 1031 aaKnown RBP28.74■■■□□ 2.19
DDX41-202ENST00000503078 CCDC112Q8NEF3 446 aa28.74■■■□□ 2.19
DDX41-202ENST00000503078 FEZ1Q99689 392 aa28.74■■■□□ 2.19
DDX41-202ENST00000503078 SLC52A2Q9HAB3 445 aa28.74■■■□□ 2.19
DDX41-202ENST00000503078 GOLPH3LQ9H4A5 285 aa28.74■■■□□ 2.19
DDX41-202ENST00000503078 CTDNEP1O95476 244 aa28.73■■■□□ 2.19
DDX41-202ENST00000503078 ATL3Q6DD88 541 aa28.73■■■□□ 2.19
DDX41-202ENST00000503078 CCDC73Q6ZRK6 1079 aa28.73■■■□□ 2.19
DDX41-202ENST00000503078 KBTBD3Q8NAB2 608 aa28.73■■■□□ 2.19
DDX41-202ENST00000503078 LAMA4Q16363 1823 aa28.73■■■□□ 2.19
DDX41-202ENST00000503078 PTPDC1A2A3K4 754 aa28.73■■■□□ 2.19
DDX41-202ENST00000503078 RBM6P78332 1123 aaKnown RBP28.73■■■□□ 2.19
DDX41-202ENST00000503078 SNW1Q13573 536 aaKnown RBP28.73■■■□□ 2.19
DDX41-202ENST00000503078 PROSER2Q86WR7 435 aaPredicted RBP28.73■■■□□ 2.19
DDX41-202ENST00000503078 FTOQ9C0B1 505 aaKnown RBP eCLIP28.73■■■□□ 2.19
DDX41-202ENST00000503078 UBE3BQ7Z3V4 1068 aa28.72■■■□□ 2.19
DDX41-202ENST00000503078 ZNF396Q96N95 335 aaPredicted RBP28.72■■■□□ 2.19
DDX41-202ENST00000503078 USP28Q96RU2 1077 aa28.72■■■□□ 2.19
DDX41-202ENST00000503078 BECN2A8MW95 431 aa28.71■■■□□ 2.19
DDX41-202ENST00000503078 CEP135Q66GS9 1140 aa28.71■■■□□ 2.19
DDX41-202ENST00000503078 LRP10Q7Z4F1 713 aa28.71■■■□□ 2.19
DDX41-202ENST00000503078 KINO60870 393 aaKnown RBP28.7■■■□□ 2.19
DDX41-202ENST00000503078 FOSBP53539 338 aa28.7■■■□□ 2.19
DDX41-202ENST00000503078 APOBRQ0VD83 1088 aa28.7■■■□□ 2.19
DDX41-202ENST00000503078 ENGASEQ8NFI3 743 aa28.7■■■□□ 2.18
DDX41-202ENST00000503078 AGXT2Q9BYV1 514 aa28.7■■■□□ 2.18
DDX41-202ENST00000503078 ANO10Q9NW15 660 aa28.7■■■□□ 2.18
DDX41-202ENST00000503078 SCN11AQ9UI33 1791 aa28.7■■■□□ 2.18
DDX41-202ENST00000503078 AFDNP55196 1824 aaKnown RBP28.7■■■□□ 2.18
DDX41-202ENST00000503078 KDM6AO15550 1401 aaPredicted RBP28.7■■■□□ 2.18
DDX41-202ENST00000503078 FAM160A1Q05DH4 1040 aa28.69■■■□□ 2.18
DDX41-202ENST00000503078 LMOD2Q6P5Q4 547 aa28.69■■■□□ 2.18
DDX41-202ENST00000503078 ZHX1Q9UKY1 873 aaPredicted RBP28.69■■■□□ 2.18
DDX41-202ENST00000503078 PALLDQ8WX93 1383 aa28.69■■■□□ 2.18
DDX41-202ENST00000503078 EXOSC10Q01780 885 aaKnown RBP28.69■■■□□ 2.18
DDX41-202ENST00000503078 DHX40Q8IX18 779 aaKnown RBP28.69■■■□□ 2.18
DDX41-202ENST00000503078 NFATC2IPQ8NCF5 419 aa28.69■■■□□ 2.18
DDX41-202ENST00000503078 ZNF496Q96IT1 587 aaPredicted RBP28.69■■■□□ 2.18
DDX41-202ENST00000503078 DSCC1Q9BVC3 393 aa28.69■■■□□ 2.18
DDX41-202ENST00000503078 HELLSQ9NRZ9 838 aa28.69■■■□□ 2.18
DDX41-202ENST00000503078 ARID5BQ14865 1188 aa28.68■■■□□ 2.18
DDX41-202ENST00000503078 TRPM3Q9HCF6 1732 aaPredicted RBP28.68■■■□□ 2.18
DDX41-202ENST00000503078 CGNQ9P2M7 1197 aaKnown RBP28.68■■■□□ 2.18
DDX41-202ENST00000503078 SALL1Q9NSC2 1324 aa28.68■■■□□ 2.18
DDX41-202ENST00000503078 CCT2P78371 535 aaKnown RBP28.67■■■□□ 2.18
DDX41-202ENST00000503078 OGFRQ9NZT2 677 aa28.67■■■□□ 2.18
DDX41-202ENST00000503078 C1orf167Q5SNV9 1468 aa28.67■■■□□ 2.18
DDX41-202ENST00000503078 SKILP12757 684 aa28.67■■■□□ 2.18
DDX41-202ENST00000503078 C19orf44Q9H6X5 657 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms