RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 GRIN2BQ13224 1484 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 A0A0U1RQG5 324 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 A0A1B0GTH6 734 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 GDF9O60383 454 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 CENPBP07199 599 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 IDH3AP50213 366 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 PRR20EP86478 221 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 PRR20CP86479 221 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 PRR20DP86480 221 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 PRR20BP86481 221 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 PRR20AP86496 221 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 ENOX2Q16206 610 aaKnown RBP5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 IER5Q5VY09 327 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 ZNF438Q7Z4V0 828 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 TEX2Q8IWB9 1127 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 SMC5Q8IY18 1101 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 HPS1Q92902 700 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 MRFAP1L1Q96HT8 127 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 SUSD3Q96L08 255 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 CSRNP1Q96S65 589 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 TIMMDC1Q9NPL8 285 aa5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 DDX41Q9UJV9 622 aaKnown RBP5.8□□□□□ -1.48
HMGB1P21-201ENST00000502313 SYNJ2O15056 1496 aa5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 GAPVD1Q14C86 1478 aa5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 SPATA31C2B4DYI2 1134 aa5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 DNAJC6O75061 913 aa5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 CPNE3O75131 537 aaKnown RBP5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 GNA15P30679 374 aa5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 CTSOP43234 321 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 POU4F2Q12837 409 aa5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 HSP90AB4PQ58FF6 505 aa5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 CMTR1Q8N1G2 835 aaKnown RBP5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 SNX29Q8TEQ0 813 aa5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 HSH2DQ96JZ2 352 aa5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 FRMD6Q96NE9 622 aa5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 SPOCK3Q9BQ16 436 aa5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 DNAJC25Q9H1X3 360 aa5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 DDX56Q9NY93 547 aaKnown RBP5.79□□□□□ -1.48
HMGB1P21-201ENST00000502313 SNAPC4Q5SXM2 1469 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 FAM187AA6NFU0 413 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 TTLL8A6PVC2 850 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 UBAP1LF5GYI3 381 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 K7ELQ4 463 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 EIF1AYO14602 144 aaKnown RBP5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 U2SURPO15042 1029 aaKnown RBP5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 PHACTR2O75167 634 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 XRCC5P13010 732 aaKnown RBP5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 NUP160Q12769 1436 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 WDR44Q5JSH3 913 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 MRPL14Q6P1L8 145 aaKnown RBP5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 LRRC69Q6ZNQ3 347 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 VPS37DQ86XT2 251 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 FMNL3Q8IVF7 1028 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 ZNF654Q8IZM8 581 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 ZNF295-AS1Q8N0V1 137 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 CEP63Q96MT8 703 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 PRR12Q9ULL5 1215 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 ERICH3Q5RHP9 1530 aa5.78□□□□□ -1.48
HMGB1P21-201ENST00000502313 FGRP09769 529 aa5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 RHOQP17081 205 aa5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 EIF4BP23588 611 aaKnown RBP5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 ORC1Q13415 861 aa5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 NFE2L2Q16236 605 aa5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 PDE12Q6L8Q7 609 aaKnown RBP5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 BTLAQ7Z6A9 289 aa5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 CCDC146Q8IYE0 955 aa5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 RNF217Q8TC41 542 aa5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 RNPC3Q96LT9 517 aaKnown RBP5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 SPC25Q9HBM1 224 aa5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 GPAMQ9HCL2 828 aa5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 SRA1Q9HD15 236 aaKnown RBP5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 PDZRN3Q9UPQ7 1066 aa5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 IGF1RP08069 1367 aa5.77□□□□□ -1.49
HMGB1P21-201ENST00000502313 ARHGEF11O15085 1522 aa5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 S100BP04271 92 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 CTSHP09668 335 aa5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 MSX1P28360 303 aa5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 AMPD3Q01432 767 aa5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 FAM50AQ14320 339 aaKnown RBP5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 RALBP1Q15311 655 aa5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 FOXD4L6Q3SYB3 417 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 EFHC2Q5JST6 749 aa5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 FAM26DQ5JW98 314 aa5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 SPTY2D1Q68D10 685 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 FOXD4L3Q6VB84 417 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 USP48Q86UV5 1035 aa5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 RTCBQ9Y3I0 505 aaKnown RBP5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 ADAMTS12P58397 1594 aa5.76□□□□□ -1.49
HMGB1P21-201ENST00000502313 CHD1O14646 1710 aa5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 A0A1W2PNR3 127 aa5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 A6NHS1 94 aa5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 LCE2BO14633 110 aa5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 ENPP3O14638 875 aa5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 CREB3O43889 395 aa5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 GADD45BO75293 160 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 IGHA2P01877 340 aa5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 TTC39BQ5VTQ0 682 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 ZNF280CQ8ND82 737 aa5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 CRELD1Q96HD1 420 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms