RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 RGL4Q8IZJ4 473 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 UBE2Q2Q8WVN8 375 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 SLC12A5Q9H2X9 1139 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 CHMP5Q9NZZ3 219 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 SEPT3Q9UH03 358 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 MSH6P52701 1360 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 M0R2N6 131 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 TAGLNQ01995 201 aaKnown RBP4.9□□□□□ -1.63
CLTC-209ENST00000498711 NUCB1Q02818 461 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 NBPF20Q3BBV1 942 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 EAPPQ56P03 285 aaPredicted RBP4.9□□□□□ -1.63
CLTC-209ENST00000498711 BPHLQ86WA6 291 aaPredicted RBP4.9□□□□□ -1.63
CLTC-209ENST00000498711 ARHGAP45Q92619 1136 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 SLC10A4Q96EP9 437 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 CFAP53Q96M91 514 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 RRAGDQ9NQL2 400 aaPredicted RBP4.9□□□□□ -1.63
CLTC-209ENST00000498711 XRCC6P12956 609 aaKnown RBP eCLIP4.89□□□□□ -1.63
CLTC-209ENST00000498711 FKBP5Q13451 457 aaPredicted RBP4.89□□□□□ -1.63
CLTC-209ENST00000498711 EVC2Q86UK5 1308 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 CCDC125Q86Z20 511 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 COL26A1Q96A83 441 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 KIF16BQ96L93 1317 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 KIF20BQ96Q89 1820 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 DDX19BQ9UMR2 479 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 MST1RQ04912 1400 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 TMPOP42166 694 aaKnown RBP4.89□□□□□ -1.63
CLTC-209ENST00000498711 EMP3P54852 163 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 MTMR3Q13615 1198 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 IDI1Q13907 227 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 ERFEQ4G0M1 354 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 KIF2CQ99661 725 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 PCDHB11Q9Y5F2 797 aa4.89□□□□□ -1.63
CLTC-209ENST00000498711 USP54Q70EL1 1684 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 TOPAZ1Q8N9V7 1692 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 ANKARQ7Z5J8 1434 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 LGR5O75473 907 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 TRIM27P14373 513 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 TSNAXIP1Q2TAA8 658 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 PTCRAQ6ISU1 281 aaPredicted RBP4.88□□□□□ -1.63
CLTC-209ENST00000498711 ATF7IPQ6VMQ6 1270 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 CCDC24Q8N4L8 307 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 TSEN2Q8NCE0 465 aaKnown RBP4.88□□□□□ -1.63
CLTC-209ENST00000498711 C22orf23Q9BZE7 217 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 CFAP65Q6ZU64 1925 aaKnown RBP4.88□□□□□ -1.63
CLTC-209ENST00000498711 HRO43593 1189 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 ZNF853P0CG23 659 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 AGERQ15109 404 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 SEPT12Q8IYM1 358 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 HELQQ8TDG4 1101 aa4.88□□□□□ -1.63
CLTC-209ENST00000498711 A0A1W2PP64 1363 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 ATAD2Q6PL18 1390 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 IBTKQ9P2D0 1353 aaPredicted RBP4.87□□□□□ -1.63
CLTC-209ENST00000498711 PTMSP20962 102 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 COPS2P61201 443 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 FAM177A1Q8N128 213 aaPredicted RBP4.87□□□□□ -1.63
CLTC-209ENST00000498711 SSH1Q8WYL5 1049 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 UPF2Q9HAU5 1272 aaKnown RBP4.87□□□□□ -1.63
CLTC-209ENST00000498711 ABCA3Q99758 1704 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 NWD2Q9ULI1 1742 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 TMEM94Q12767 1356 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 SPATA31A6Q5VVP1 1343 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 ESPNB1AK53 854 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 ADH1BP00325 375 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 LTKP29376 864 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 MRE11P49959 708 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 RAB3GAP1Q15042 981 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 BMP2KLQ5H9B9 411 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 CAPN12Q6ZSI9 719 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 CDV3Q9UKY7 258 aaKnown RBP4.87□□□□□ -1.63
CLTC-209ENST00000498711 YTHDC2Q9H6S0 1430 aaKnown RBP4.87□□□□□ -1.63
CLTC-209ENST00000498711 JCADQ9P266 1359 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 ABCC6O95255 1503 aa4.87□□□□□ -1.63
CLTC-209ENST00000498711 FAM13AO94988 1023 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 MYCP01106 439 aaPredicted RBP4.86□□□□□ -1.63
CLTC-209ENST00000498711 LSM11P83369 360 aaKnown RBP eCLIP4.86□□□□□ -1.63
CLTC-209ENST00000498711 EXOSC9Q06265 439 aaKnown RBP4.86□□□□□ -1.63
CLTC-209ENST00000498711 SF3A1Q15459 793 aaKnown RBP4.86□□□□□ -1.63
CLTC-209ENST00000498711 WNT2BQ93097 391 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 PURBQ96QR8 312 aaKnown RBP4.86□□□□□ -1.63
CLTC-209ENST00000498711 PNNQ9H307 717 aaKnown RBP4.86□□□□□ -1.63
CLTC-209ENST00000498711 ATP7BP35670 1465 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 PTPRUQ92729 1446 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 CRYBG1Q9Y4K1 1723 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 GOLGA6L3A6NEY3 463 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 FYB1O15117 783 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 FOXO3O43524 673 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 ZNF511Q8NB15 262 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 BAP1Q92560 729 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 NOB1Q9ULX3 412 aaKnown RBP4.86□□□□□ -1.63
CLTC-209ENST00000498711 TRAK1Q9UPV9 953 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 RRP7AQ9Y3A4 280 aaKnown RBP4.86□□□□□ -1.63
CLTC-209ENST00000498711 CPSF1Q10570 1443 aaKnown RBP4.86□□□□□ -1.63
CLTC-209ENST00000498711 AATKQ6ZMQ8 1374 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 ABCC4O15439 1325 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 IPO8O15397 1037 aaKnown RBP4.86□□□□□ -1.63
CLTC-209ENST00000498711 TLL1O43897 1013 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 P4HBP07237 508 aaKnown RBP4.86□□□□□ -1.63
CLTC-209ENST00000498711 NPR3P17342 541 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 CDK11BP21127 795 aaKnown RBP4.86□□□□□ -1.63
CLTC-209ENST00000498711 IGFBP4P22692 258 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms