RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 MSS51Q4VC12 460 aa7.76□□□□□ -1.17
SPTA1-209ENST00000498708 HABP4Q5JVS0 413 aaKnown RBP7.76□□□□□ -1.17
SPTA1-209ENST00000498708 ZNF787Q6DD87 383 aa7.76□□□□□ -1.17
SPTA1-209ENST00000498708 C2CD5Q86YS7 1000 aa7.76□□□□□ -1.17
SPTA1-209ENST00000498708 USP42Q9H9J4 1324 aaKnown RBP7.76□□□□□ -1.17
SPTA1-209ENST00000498708 IQCA1LA6NCM1 817 aa7.75□□□□□ -1.17
SPTA1-209ENST00000498708 TNFRSF10AO00220 468 aa7.75□□□□□ -1.17
SPTA1-209ENST00000498708 C21orf2O43822 256 aa7.75□□□□□ -1.17
SPTA1-209ENST00000498708 MDM2Q00987 491 aaPredicted RBP7.75□□□□□ -1.17
SPTA1-209ENST00000498708 DDX21Q9NR30 783 aaKnown RBP eCLIP7.75□□□□□ -1.17
SPTA1-209ENST00000498708 A0A0C4DFX4 3053 aa7.75□□□□□ -1.17
SPTA1-209ENST00000498708 EDC4Q6P2E9 1401 aaKnown RBP7.75□□□□□ -1.17
SPTA1-209ENST00000498708 ADAMTS7Q9UKP4 1686 aa7.74□□□□□ -1.17
SPTA1-209ENST00000498708 FAM187AA6NFU0 413 aa7.74□□□□□ -1.17
SPTA1-209ENST00000498708 ZBTB24O43167 697 aaPredicted RBP7.74□□□□□ -1.17
SPTA1-209ENST00000498708 EPHX2P34913 555 aa7.74□□□□□ -1.17
SPTA1-209ENST00000498708 CLCN1P35523 988 aa7.74□□□□□ -1.17
SPTA1-209ENST00000498708 ECE1P42892 770 aa7.74□□□□□ -1.17
SPTA1-209ENST00000498708 HSP90AB2PQ58FF8 381 aa7.74□□□□□ -1.17
SPTA1-209ENST00000498708 MKI67P46013 3256 aaKnown RBP7.74□□□□□ -1.17
SPTA1-209ENST00000498708 NRXN2Q9P2S2 1712 aa7.74□□□□□ -1.17
SPTA1-209ENST00000498708 ZNF831Q5JPB2 1677 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 A0A1W2PP64 1363 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 CARMIL3Q8ND23 1372 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 TONSLQ96HA7 1378 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 H0YIN7 160 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 DLL1O00548 723 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 MAP2K2P36507 400 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 FOXC1Q12948 553 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 NFIXQ14938 502 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 USPL1Q5W0Q7 1092 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 CST9Q5W186 159 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 RNF19BQ6ZMZ0 732 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 KRI1Q8N9T8 703 aaKnown RBP7.73□□□□□ -1.17
SPTA1-209ENST00000498708 CCDC102AQ96A19 550 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 TERF2IPQ9NYB0 399 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 HACL1Q9UJ83 578 aa7.73□□□□□ -1.17
SPTA1-209ENST00000498708 TRPM7Q96QT4 1865 aa7.72□□□□□ -1.17
SPTA1-209ENST00000498708 SMG6Q86US8 1419 aaKnown RBP7.72□□□□□ -1.17
SPTA1-209ENST00000498708 TRAF5O00463 557 aa7.72□□□□□ -1.17
SPTA1-209ENST00000498708 SERPINB2P05120 415 aa7.72□□□□□ -1.17
SPTA1-209ENST00000498708 CRKLP46109 303 aaKnown RBP7.72□□□□□ -1.17
SPTA1-209ENST00000498708 ZNF622Q969S3 477 aaKnown RBP eCLIP7.72□□□□□ -1.173e-11■■■■□ 22.7
SPTA1-209ENST00000498708 GCC1Q96CN9 775 aa7.72□□□□□ -1.17
SPTA1-209ENST00000498708 COG3Q96JB2 828 aa7.72□□□□□ -1.17
SPTA1-209ENST00000498708 USB1Q9BQ65 265 aaKnown RBP7.72□□□□□ -1.17
SPTA1-209ENST00000498708 TAOK3Q9H2K8 898 aa7.72□□□□□ -1.17
SPTA1-209ENST00000498708 GPCPD1Q9NPB8 672 aa7.72□□□□□ -1.17
SPTA1-209ENST00000498708 PKD2L1Q9P0L9 805 aa7.72□□□□□ -1.17
SPTA1-209ENST00000498708 CACNA1SQ13698 1873 aa7.72□□□□□ -1.17
SPTA1-209ENST00000498708 ANKRD31Q8N7Z5 1873 aa7.72□□□□□ -1.17
SPTA1-209ENST00000498708 ZNF541Q9H0D2 1346 aa7.72□□□□□ -1.17
SPTA1-209ENST00000498708 LTBP3Q9NS15 1303 aa7.72□□□□□ -1.17
SPTA1-209ENST00000498708 SLX4Q8IY92 1834 aa7.71□□□□□ -1.17
SPTA1-209ENST00000498708 ST20-MTHFSA0A0A6YYL1 179 aa7.71□□□□□ -1.18
SPTA1-209ENST00000498708 CA12O43570 354 aa7.71□□□□□ -1.18
SPTA1-209ENST00000498708 PHKG2P15735 406 aa7.71□□□□□ -1.18
SPTA1-209ENST00000498708 FXR1P51114 621 aaKnown RBP eCLIP7.71□□□□□ -1.18
SPTA1-209ENST00000498708 MMP16P51512 607 aa7.71□□□□□ -1.18
SPTA1-209ENST00000498708 CIAPIN1Q6FI81 312 aa7.71□□□□□ -1.18
SPTA1-209ENST00000498708 INTS5Q6P9B9 1019 aaKnown RBP7.71□□□□□ -1.18
SPTA1-209ENST00000498708 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.71□□□□□ -1.18
SPTA1-209ENST00000498708 ZIC5Q96T25 663 aa7.71□□□□□ -1.18
SPTA1-209ENST00000498708 GGNBP2Q9H3C7 697 aa7.71□□□□□ -1.18
SPTA1-209ENST00000498708 PRDM9Q9NQV7 894 aa7.71□□□□□ -1.18
SPTA1-209ENST00000498708 SPG7Q9UQ90 795 aa7.71□□□□□ -1.18
SPTA1-209ENST00000498708 TLL2Q9Y6L7 1015 aa7.71□□□□□ -1.18
SPTA1-209ENST00000498708 RNF123Q5XPI4 1314 aa7.71□□□□□ -1.18
SPTA1-209ENST00000498708 RTL1A6NKG5 1358 aa7.71□□□□□ -1.18
SPTA1-209ENST00000498708 COL11A2P13942 1736 aaPredicted RBP7.7□□□□□ -1.18
SPTA1-209ENST00000498708 PTCD1O75127 700 aaKnown RBP7.7□□□□□ -1.18
SPTA1-209ENST00000498708 BRPF1P55201 1214 aaPredicted RBP7.7□□□□□ -1.18
SPTA1-209ENST00000498708 PNMA8AQ86V59 439 aaPredicted RBP7.7□□□□□ -1.18
SPTA1-209ENST00000498708 CCDC24Q8N4L8 307 aa7.7□□□□□ -1.18
SPTA1-209ENST00000498708 NBPF15Q8N660 670 aa7.7□□□□□ -1.18
SPTA1-209ENST00000498708 INSRP06213 1382 aa7.7□□□□□ -1.18
SPTA1-209ENST00000498708 IFNL2Q8IZJ0 200 aa7.69□□□□□ -1.18
SPTA1-209ENST00000498708 CYP4X1Q8N118 509 aa7.69□□□□□ -1.18
SPTA1-209ENST00000498708 FAM217BQ9NTX9 383 aaPredicted RBP7.69□□□□□ -1.18
SPTA1-209ENST00000498708 TJP1Q07157 1748 aa7.69□□□□□ -1.18
SPTA1-209ENST00000498708 HOXA2O43364 376 aa7.68□□□□□ -1.18
SPTA1-209ENST00000498708 DXOO77932 396 aaKnown RBP7.68□□□□□ -1.18
SPTA1-209ENST00000498708 SAPCD2Q86UD0 394 aa7.68□□□□□ -1.18
SPTA1-209ENST00000498708 NUTM1Q86Y26 1132 aa7.68□□□□□ -1.18
SPTA1-209ENST00000498708 TESK2Q96S53 571 aa7.68□□□□□ -1.18
SPTA1-209ENST00000498708 TOR4AQ9NXH8 423 aa7.68□□□□□ -1.18
SPTA1-209ENST00000498708 COL6A3P12111 3177 aa7.68□□□□□ -1.18
SPTA1-209ENST00000498708 CUL9Q8IWT3 2517 aa7.67□□□□□ -1.18
SPTA1-209ENST00000498708 ERVV-2B6SEH9 535 aa7.67□□□□□ -1.18
SPTA1-209ENST00000498708 BICDL1Q6ZP65 573 aa7.67□□□□□ -1.18
SPTA1-209ENST00000498708 ZNF277Q9NRM2 450 aaPredicted RBP7.67□□□□□ -1.18
SPTA1-209ENST00000498708 NCAPD2Q15021 1401 aa7.67□□□□□ -1.18
SPTA1-209ENST00000498708 FYB1O15117 783 aa7.66□□□□□ -1.18
SPTA1-209ENST00000498708 TRIM32Q13049 653 aa7.66□□□□□ -1.18
SPTA1-209ENST00000498708 PRPF40BQ6NWY9 871 aaKnown RBP7.66□□□□□ -1.18
SPTA1-209ENST00000498708 CRIPAKQ8N1N5 446 aa7.66□□□□□ -1.18
SPTA1-209ENST00000498708 NARFQ9UHQ1 456 aa7.66□□□□□ -1.18
SPTA1-209ENST00000498708 SOS1Q07889 1333 aaPredicted RBP7.66□□□□□ -1.18
SPTA1-209ENST00000498708 TTC24A2A3L6 582 aaPredicted RBP7.65□□□□□ -1.18
SPTA1-209ENST00000498708 WNT7AO00755 349 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms