RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 ITGBL1O95965 494 aaPredicted RBP19.81■□□□□ 0.76
TNRC18-210ENST00000497663 SLC10A5Q5PT55 438 aa19.81■□□□□ 0.76
TNRC18-210ENST00000497663 CRAMP1Q96RY5 1269 aa19.81■□□□□ 0.76
TNRC18-210ENST00000497663 ABCC4O15439 1325 aa19.8■□□□□ 0.76
TNRC18-210ENST00000497663 FMR1Q06787 632 aaKnown RBP eCLIP19.8■□□□□ 0.762e-7■■■□□ 14.9
TNRC18-210ENST00000497663 RBM17Q96I25 401 aaKnown RBP19.8■□□□□ 0.76
TNRC18-210ENST00000497663 COL4A1P02462 1669 aa19.79■□□□□ 0.76
TNRC18-210ENST00000497663 EPHX2P34913 555 aa19.79■□□□□ 0.76
TNRC18-210ENST00000497663 LMOD3Q0VAK6 560 aa19.79■□□□□ 0.76
TNRC18-210ENST00000497663 PARP10Q53GL7 1025 aa19.79■□□□□ 0.76
TNRC18-210ENST00000497663 MAP1SQ66K74 1059 aaPredicted RBP19.79■□□□□ 0.76
TNRC18-210ENST00000497663 PPP1R42Q7Z4L9 355 aa19.79■□□□□ 0.76
TNRC18-210ENST00000497663 LDHDQ86WU2 507 aa19.79■□□□□ 0.76
TNRC18-210ENST00000497663 PRKRIP1Q9H875 184 aaPredicted RBP19.79■□□□□ 0.76
TNRC18-210ENST00000497663 DDX21Q9NR30 783 aaKnown RBP eCLIP19.79■□□□□ 0.76
TNRC18-210ENST00000497663 HACL1Q9UJ83 578 aa19.79■□□□□ 0.76
TNRC18-210ENST00000497663 GJA3Q9Y6H8 435 aa19.79■□□□□ 0.76
TNRC18-210ENST00000497663 ADAMTSL1Q8N6G6 1762 aa19.79■□□□□ 0.76
TNRC18-210ENST00000497663 IQCA1LA6NCM1 817 aa19.78■□□□□ 0.76
TNRC18-210ENST00000497663 ZNF316A6NFI3 1004 aaPredicted RBP19.78■□□□□ 0.76
TNRC18-210ENST00000497663 HSPA1AP0DMV8 641 aaKnown RBP19.78■□□□□ 0.76
TNRC18-210ENST00000497663 HSPA1BP0DMV9 641 aaKnown RBP19.78■□□□□ 0.76
TNRC18-210ENST00000497663 TCIRG1Q13488 830 aa19.78■□□□□ 0.76
TNRC18-210ENST00000497663 WDR43Q15061 677 aaKnown RBP eCLIP19.78■□□□□ 0.76
TNRC18-210ENST00000497663 NLRP3Q96P20 1036 aa19.78■□□□□ 0.76
TNRC18-210ENST00000497663 SCN4AP35499 1836 aa19.77■□□□□ 0.76
TNRC18-210ENST00000497663 EPS15P42566 896 aa19.77■□□□□ 0.76
TNRC18-210ENST00000497663 CCDC184Q52MB2 194 aa19.77■□□□□ 0.76
TNRC18-210ENST00000497663 LARGE2Q8N3Y3 721 aa19.77■□□□□ 0.76
TNRC18-210ENST00000497663 MBIPQ9NS73 344 aa19.77■□□□□ 0.76
TNRC18-210ENST00000497663 ATP5J2-PTCD1G3V325 749 aa19.76■□□□□ 0.75
TNRC18-210ENST00000497663 SCNN1DP51172 638 aa19.76■□□□□ 0.75
TNRC18-210ENST00000497663 AOC3Q16853 763 aa19.76■□□□□ 0.75
TNRC18-210ENST00000497663 CC2D2BQ6DHV5 1058 aa19.76■□□□□ 0.75
TNRC18-210ENST00000497663 GPC2Q8N158 579 aa19.76■□□□□ 0.75
TNRC18-210ENST00000497663 ATP6V0A2Q9Y487 856 aa19.76■□□□□ 0.75
TNRC18-210ENST00000497663 TAF1P21675 1872 aa19.75■□□□□ 0.75
TNRC18-210ENST00000497663 LAMB2P55268 1798 aa19.75■□□□□ 0.75
TNRC18-210ENST00000497663 SPDYE16A6NNV3 312 aaPredicted RBP19.75■□□□□ 0.75
TNRC18-210ENST00000497663 APAF1O14727 1248 aa19.75■□□□□ 0.75
TNRC18-210ENST00000497663 ARSIQ5FYB1 569 aa19.75■□□□□ 0.75
TNRC18-210ENST00000497663 HDGFL1Q5TGJ6 251 aa19.75■□□□□ 0.75
TNRC18-210ENST00000497663 JDP2Q8WYK2 163 aa19.75■□□□□ 0.75
TNRC18-210ENST00000497663 TRMT112Q9UI30 125 aaKnown RBP19.75■□□□□ 0.75
TNRC18-210ENST00000497663 ZNF853P0CG23 659 aa19.74■□□□□ 0.75
TNRC18-210ENST00000497663 NBR1Q14596 966 aa19.74■□□□□ 0.75
TNRC18-210ENST00000497663 DUSP27Q5VZP5 1158 aa19.74■□□□□ 0.75
TNRC18-210ENST00000497663 ANKRD36CQ5JPF3 1778 aa19.74■□□□□ 0.75
TNRC18-210ENST00000497663 ELL2O00472 640 aaPredicted RBP19.73■□□□□ 0.75
TNRC18-210ENST00000497663 PPIP5K2O43314 1243 aa19.73■□□□□ 0.75
TNRC18-210ENST00000497663 RTL5Q5HYW3 569 aaPredicted RBP19.73■□□□□ 0.75
TNRC18-210ENST00000497663 GPR153Q6NV75 609 aa19.73■□□□□ 0.75
TNRC18-210ENST00000497663 CNTROBQ8N137 903 aa19.73■□□□□ 0.75
TNRC18-210ENST00000497663 FAM89AQ96GI7 184 aa19.73■□□□□ 0.75
TNRC18-210ENST00000497663 ISCA1Q9BUE6 129 aa19.73■□□□□ 0.75
TNRC18-210ENST00000497663 EIF6P56537 245 aaKnown RBP19.72■□□□□ 0.75
TNRC18-210ENST00000497663 SH3TC1Q8TE82 1336 aa19.72■□□□□ 0.75
TNRC18-210ENST00000497663 CNTNAP1P78357 1384 aa19.71■□□□□ 0.75
TNRC18-210ENST00000497663 SHTN1A0MZ66 631 aa19.71■□□□□ 0.75
TNRC18-210ENST00000497663 EVI5O60447 810 aa19.71■□□□□ 0.75
TNRC18-210ENST00000497663 VEGFBP49765 207 aa19.71■□□□□ 0.75
TNRC18-210ENST00000497663 HSP90AB3PQ58FF7 597 aa19.71■□□□□ 0.75
TNRC18-210ENST00000497663 ANKRD13DQ6ZTN6 518 aa19.71■□□□□ 0.75
TNRC18-210ENST00000497663 PLBD2Q8NHP8 589 aa19.71■□□□□ 0.75
TNRC18-210ENST00000497663 PHAXQ9H814 394 aaKnown RBP19.71■□□□□ 0.75
TNRC18-210ENST00000497663 DUOX1Q9NRD9 1551 aa19.7■□□□□ 0.74
TNRC18-210ENST00000497663 CXCL9Q07325 125 aa19.7■□□□□ 0.74
TNRC18-210ENST00000497663 SP8Q8IXZ3 490 aa19.7■□□□□ 0.74
TNRC18-210ENST00000497663 NIM1KQ8IY84 436 aa19.7■□□□□ 0.74
TNRC18-210ENST00000497663 C8orf58Q8NAV2 365 aa19.7■□□□□ 0.74
TNRC18-210ENST00000497663 CELF1Q92879 486 aaKnown RBP19.7■□□□□ 0.74
TNRC18-210ENST00000497663 RTFDC1Q9BY42 306 aaPredicted RBP19.7■□□□□ 0.74
TNRC18-210ENST00000497663 DDX60Q8IY21 1712 aaKnown RBP19.69■□□□□ 0.74
TNRC18-210ENST00000497663 TMEM88BA6NKF7 163 aa19.69■□□□□ 0.74
TNRC18-210ENST00000497663 TRAF5O00463 557 aa19.69■□□□□ 0.74
TNRC18-210ENST00000497663 GRAPQ13588 217 aa19.69■□□□□ 0.74
TNRC18-210ENST00000497663 GRAPLQ8TC17 118 aaPredicted RBP19.69■□□□□ 0.74
TNRC18-210ENST00000497663 JARID2Q92833 1246 aaPredicted RBP19.69■□□□□ 0.74
TNRC18-210ENST00000497663 FAM163AQ96GL9 167 aaPredicted RBP19.69■□□□□ 0.74
TNRC18-210ENST00000497663 YDJCA8MPS7 323 aa19.68■□□□□ 0.74
TNRC18-210ENST00000497663 BBOX1O75936 387 aa19.68■□□□□ 0.74
TNRC18-210ENST00000497663 HOXB1P14653 301 aaPredicted RBP19.68■□□□□ 0.74
TNRC18-210ENST00000497663 DPP8Q6V1X1 898 aaPredicted RBP19.68■□□□□ 0.74
TNRC18-210ENST00000497663 PNMA8AQ86V59 439 aaPredicted RBP19.68■□□□□ 0.74
TNRC18-210ENST00000497663 MPNDQ8N594 471 aa19.68■□□□□ 0.74
TNRC18-210ENST00000497663 KHSRPQ92945 711 aaKnown RBP eCLIP19.68■□□□□ 0.74
TNRC18-210ENST00000497663 GPR101Q96P66 508 aaPredicted RBP19.68■□□□□ 0.74
TNRC18-210ENST00000497663 DBF4Q9UBU7 674 aaPredicted RBP19.68■□□□□ 0.74
TNRC18-210ENST00000497663 RAD17O75943 681 aa19.67■□□□□ 0.74
TNRC18-210ENST00000497663 HOXB7P09629 217 aa19.67■□□□□ 0.74
TNRC18-210ENST00000497663 NUDT7P0C024 238 aa19.67■□□□□ 0.74
TNRC18-210ENST00000497663 DDX46Q7L014 1031 aaKnown RBP19.67■□□□□ 0.74
TNRC18-210ENST00000497663 TSPYL6Q8N831 410 aa19.67■□□□□ 0.74
TNRC18-210ENST00000497663 FOXN1O15353 648 aa19.66■□□□□ 0.74
TNRC18-210ENST00000497663 ST18O60284 1047 aa19.66■□□□□ 0.74
TNRC18-210ENST00000497663 GMPSP49915 693 aaPredicted RBP19.66■□□□□ 0.74
TNRC18-210ENST00000497663 GRIPAP1Q4V328 841 aa19.66■□□□□ 0.74
TNRC18-210ENST00000497663 ZNRF3Q9ULT6 936 aa19.66■□□□□ 0.74
TNRC18-210ENST00000497663 HIRAP54198 1017 aaPredicted RBP19.65■□□□□ 0.74
TNRC18-210ENST00000497663 KIAA2012Q0VF49 1180 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms