RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 USHBP1Q8N6Y0 703 aa8.73□□□□□ -1.01
HOXA9-206ENST00000497089 ADAMTS19Q8TE59 1207 aa8.73□□□□□ -1.01
HOXA9-206ENST00000497089 QSER1Q2KHR3 1735 aa8.72□□□□□ -1.01
HOXA9-206ENST00000497089 KIF7Q2M1P5 1343 aa8.72□□□□□ -1.01
HOXA9-206ENST00000497089 FBXO45P0C2W1 286 aa8.72□□□□□ -1.01
HOXA9-206ENST00000497089 SLC15A2Q16348 729 aa8.72□□□□□ -1.01
HOXA9-206ENST00000497089 SLC27A3Q5K4L6 730 aa8.72□□□□□ -1.01
HOXA9-206ENST00000497089 ZNF697Q5TEC3 545 aa8.72□□□□□ -1.01
HOXA9-206ENST00000497089 ZNF592Q92610 1267 aa8.72□□□□□ -1.01
HOXA9-206ENST00000497089 SPON1Q9HCB6 807 aa8.72□□□□□ -1.01
HOXA9-206ENST00000497089 GPSM3Q9Y4H4 160 aa8.72□□□□□ -1.01
HOXA9-206ENST00000497089 PPM1GO15355 546 aaPredicted RBP8.71□□□□□ -1.02
HOXA9-206ENST00000497089 CYP27B1O15528 508 aa8.71□□□□□ -1.02
HOXA9-206ENST00000497089 SH3RF1Q7Z6J0 888 aa8.71□□□□□ -1.02
HOXA9-206ENST00000497089 BPHLQ86WA6 291 aaPredicted RBP8.71□□□□□ -1.02
HOXA9-206ENST00000497089 FOXJ1Q92949 421 aa8.71□□□□□ -1.02
HOXA9-206ENST00000497089 LRRC4BQ9NT99 713 aa8.71□□□□□ -1.02
HOXA9-206ENST00000497089 STK32BQ9NY57 414 aa8.71□□□□□ -1.02
HOXA9-206ENST00000497089 KNSTRNQ9Y448 316 aa8.71□□□□□ -1.02
HOXA9-206ENST00000497089 EIF4A2Q14240 407 aaKnown RBP8.7□□□□□ -1.02
HOXA9-206ENST00000497089 RC3H1Q5TC82 1133 aaKnown RBP8.7□□□□□ -1.02
HOXA9-206ENST00000497089 PKNOX2Q96KN3 472 aa8.7□□□□□ -1.02
HOXA9-206ENST00000497089 TOGARAM1Q9Y4F4 1720 aa8.7□□□□□ -1.02
HOXA9-206ENST00000497089 ITGB4P16144 1822 aa8.69□□□□□ -1.02
HOXA9-206ENST00000497089 IGSF1Q8N6C5 1336 aa8.69□□□□□ -1.02
HOXA9-206ENST00000497089 WNT7AO00755 349 aa8.69□□□□□ -1.02
HOXA9-206ENST00000497089 TNNT2P45379 298 aaPredicted RBP8.69□□□□□ -1.02
HOXA9-206ENST00000497089 AGERQ15109 404 aa8.69□□□□□ -1.02
HOXA9-206ENST00000497089 ZNF827Q17R98 1081 aa8.69□□□□□ -1.02
HOXA9-206ENST00000497089 GLIPR1L2Q4G1C9 344 aa8.69□□□□□ -1.02
HOXA9-206ENST00000497089 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
HOXA9-206ENST00000497089 MORC1Q86VD1 984 aa8.69□□□□□ -1.02
HOXA9-206ENST00000497089 OCSTAMPQ9BR26 566 aa8.69□□□□□ -1.02
HOXA9-206ENST00000497089 PPP1R12CQ9BZL4 782 aa8.69□□□□□ -1.02
HOXA9-206ENST00000497089 PDGFDQ9GZP0 370 aaPredicted RBP8.69□□□□□ -1.02
HOXA9-206ENST00000497089 SPG7Q9UQ90 795 aa8.69□□□□□ -1.02
HOXA9-206ENST00000497089 NPC1L1Q9UHC9 1359 aa8.68□□□□□ -1.02
HOXA9-206ENST00000497089 COL24A1Q17RW2 1714 aa8.68□□□□□ -1.02
HOXA9-206ENST00000497089 PDIA4P13667 645 aaKnown RBP8.68□□□□□ -1.02
HOXA9-206ENST00000497089 HMGB2P26583 209 aaKnown RBP8.68□□□□□ -1.02
HOXA9-206ENST00000497089 SYTL4Q96C24 671 aaPredicted RBP8.68□□□□□ -1.02
HOXA9-206ENST00000497089 ARHGAP9Q9BRR9 750 aa8.68□□□□□ -1.02
HOXA9-206ENST00000497089 MTFR1LQ9H019 292 aa8.68□□□□□ -1.02
HOXA9-206ENST00000497089 RFX1P22670 979 aa8.67□□□□□ -1.02
HOXA9-206ENST00000497089 VARSP26640 1264 aaKnown RBP8.67□□□□□ -1.02
HOXA9-206ENST00000497089 MCCD1P59942 119 aaPredicted RBP8.67□□□□□ -1.02
HOXA9-206ENST00000497089 EHBP1Q8NDI1 1231 aa8.67□□□□□ -1.02
HOXA9-206ENST00000497089 SLC16A10Q8TF71 515 aa8.67□□□□□ -1.02
HOXA9-206ENST00000497089 PKD2L1Q9P0L9 805 aa8.67□□□□□ -1.02
HOXA9-206ENST00000497089 TAF1LQ8IZX4 1826 aa8.67□□□□□ -1.02
HOXA9-206ENST00000497089 TUBGCP6Q96RT7 1819 aa8.67□□□□□ -1.02
HOXA9-206ENST00000497089 KDRP35968 1356 aa8.67□□□□□ -1.02
HOXA9-206ENST00000497089 MAGEB6P1A0A0J9YX57 407 aa8.66□□□□□ -1.02
HOXA9-206ENST00000497089 PALM3A6NDB9 673 aaPredicted RBP8.66□□□□□ -1.02
HOXA9-206ENST00000497089 ZBTB7AO95365 584 aa8.66□□□□□ -1.02
HOXA9-206ENST00000497089 PHKG2P15735 406 aa8.66□□□□□ -1.02
HOXA9-206ENST00000497089 ZBTB33Q86T24 672 aa8.66□□□□□ -1.02
HOXA9-206ENST00000497089 IFNL2Q8IZJ0 200 aa8.66□□□□□ -1.02
HOXA9-206ENST00000497089 MRGPRX2Q96LB1 330 aa8.66□□□□□ -1.02
HOXA9-206ENST00000497089 TFIP11Q9UBB9 837 aaKnown RBP8.66□□□□□ -1.02
HOXA9-206ENST00000497089 NOP58Q9Y2X3 529 aaKnown RBP8.66□□□□□ -1.02
HOXA9-206ENST00000497089 C5P01031 1676 aa8.66□□□□□ -1.02
HOXA9-206ENST00000497089 GDF9O60383 454 aa8.65□□□□□ -1.02
HOXA9-206ENST00000497089 LMOD1P29536 600 aaPredicted RBP8.65□□□□□ -1.02
HOXA9-206ENST00000497089 FOXC1Q12948 553 aa8.65□□□□□ -1.02
HOXA9-206ENST00000497089 ADAM32Q8TC27 787 aa8.65□□□□□ -1.02
HOXA9-206ENST00000497089 SMARCC1Q92922 1105 aaPredicted RBP8.65□□□□□ -1.02
HOXA9-206ENST00000497089 PBXIP1Q96AQ6 731 aa8.65□□□□□ -1.02
HOXA9-206ENST00000497089 C1QTNF2Q9BXJ5 285 aa8.65□□□□□ -1.02
HOXA9-206ENST00000497089 CCNL1Q9UK58 526 aaPredicted RBP8.65□□□□□ -1.02
HOXA9-206ENST00000497089 PCDHB9Q9Y5E1 797 aa8.65□□□□□ -1.02
HOXA9-206ENST00000497089 PALLDQ8WX93 1383 aa8.65□□□□□ -1.02
HOXA9-206ENST00000497089 PNPLA7Q6ZV29 1317 aa8.65□□□□□ -1.03
HOXA9-206ENST00000497089 IL13P35225 146 aa8.64□□□□□ -1.03
HOXA9-206ENST00000497089 AMOTQ4VCS5 1084 aa8.64□□□□□ -1.03
HOXA9-206ENST00000497089 MPRIPQ6WCQ1 1025 aa8.64□□□□□ -1.03
HOXA9-206ENST00000497089 TRIM67Q6ZTA4 783 aa8.64□□□□□ -1.03
HOXA9-206ENST00000497089 PIGBQ92521 554 aa8.64□□□□□ -1.03
HOXA9-206ENST00000497089 PPP1R1BQ9UD71 204 aaPredicted RBP8.64□□□□□ -1.03
HOXA9-206ENST00000497089 MAP3K5Q99683 1374 aa8.64□□□□□ -1.03
HOXA9-206ENST00000497089 ZNF831Q5JPB2 1677 aa8.64□□□□□ -1.03
HOXA9-206ENST00000497089 ERVV-2B6SEH9 535 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 SIAH2O43255 324 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 HSP90AB1P08238 724 aaKnown RBP8.63□□□□□ -1.03
HOXA9-206ENST00000497089 MTHFSP49914 203 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 KCNQ4P56696 695 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 PRR20EP86478 221 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 PRR20CP86479 221 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 PRR20DP86480 221 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 PRR20BP86481 221 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 PRR20AP86496 221 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 ERFEQ4G0M1 354 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 PLEKHO1Q53GL0 409 aaPredicted RBP8.63□□□□□ -1.03
HOXA9-206ENST00000497089 FAM174AQ8TBP5 190 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 UCN2Q96RP3 112 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 TFCP2L1Q9NZI6 479 aa8.63□□□□□ -1.03
HOXA9-206ENST00000497089 TNFRSF10AO00220 468 aa8.62□□□□□ -1.03
HOXA9-206ENST00000497089 ATP9BO43861 1147 aa8.62□□□□□ -1.03
HOXA9-206ENST00000497089 PDE4CQ08493 712 aa8.62□□□□□ -1.03
HOXA9-206ENST00000497089 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms