RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 FAM9BQ8IZU0 186 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 TRIM52Q96A61 297 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 PNMA5Q96PV4 448 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 PHF24Q9UPV7 400 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 STARD13Q9Y3M8 1113 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 LAS1LQ9Y4W2 734 aaKnown RBP4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 ITGB2P05107 769 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 ATP11AP98196 1134 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 MAP3K10Q02779 954 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 SAMD5Q5TGI4 173 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 C1orf53Q5VUE5 145 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 EDEM1Q92611 657 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 PCGF6Q9BYE7 350 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 LATS2Q9NRM7 1088 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 DNAJB12Q9NXW2 375 aaKnown RBP4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 POLIQ9UNA4 740 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 KCNH4Q9UQ05 1017 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 LOC102724159A0A0B4J2E5 919 aa4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 PWP2Q15269 919 aaKnown RBP4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 GDF6Q6KF10 455 aaPredicted RBP4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 PSAPL1Q6NUJ1 521 aa4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 STAG2Q8N3U4 1231 aa4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 JPH1Q9HDC5 661 aaPredicted RBP4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 FOXD3Q9UJU5 478 aaPredicted RBP4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 PRDM4Q9UKN5 801 aa4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 HDAC5Q9UQL6 1122 aa4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 METTL12A8MUP2 240 aa4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 PPP1R15AO75807 674 aaPredicted RBP4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 POLR3DP05423 398 aaPredicted RBP4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 IRX3P78415 501 aaPredicted RBP4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 DHX32Q7L7V1 743 aaKnown RBP4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 HELQQ8TDG4 1101 aa4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 MYO19Q96H55 970 aa4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 CNTN3Q9P232 1028 aa4.04□□□□□ -1.76
SNRNP48-202ENST00000496946 UBAP1LF5GYI3 381 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 EIF2AK2P19525 551 aaKnown RBP4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 ARSDP51689 593 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 ARHGAP4P98171 946 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 ORC1Q13415 861 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 COL9A3Q14050 684 aaPredicted RBP4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 PERM1Q5SV97 790 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 USPL1Q5W0Q7 1092 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 SLCO4C1Q6ZQN7 724 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 BTBD6Q96KE9 485 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 SETDB2Q96T68 719 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 LACRTQ9GZZ8 138 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 APPP05067 770 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 C1orf127Q8N9H9 656 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 TRIM33Q9UPN9 1127 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 CADPSQ9ULU8 1353 aa4.03□□□□□ -1.76
SNRNP48-202ENST00000496946 FANCIQ9NVI1 1328 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 FZD6O60353 706 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 CHRNA4P43681 627 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 CCINQ13939 588 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 ANKRD13AQ8IZ07 590 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 GOLGA6L1Q8N7Z2 621 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 TRIM44Q96DX7 344 aaPredicted RBP4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 MDFIQ99750 246 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 RIPOR2Q9Y4F9 1068 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 ELOA3CA0A087WX78 387 aaPredicted RBP4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 ELOA3DA6NLF2 546 aaPredicted RBP4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 TTC36A6NLP5 189 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 BRD1O95696 1058 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 ARAFP10398 606 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 ELOA3BQ3SY89 546 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 SPTY2D1Q68D10 685 aaPredicted RBP4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 GPAT2Q6NUI2 795 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 PI16Q6UXB8 463 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 CEP120Q8N960 986 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 ELOA3Q8NG57 546 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 CCER1Q8TC90 406 aaPredicted RBP4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 GMCL1Q96IK5 515 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 PLVAPQ9BX97 442 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 ANKIB1Q9P2G1 1089 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 IVNS1ABPQ9Y6Y0 642 aa4.02□□□□□ -1.77
SNRNP48-202ENST00000496946 CENPJQ9HC77 1338 aaPredicted RBP4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 LBRQ14739 615 aaKnown RBP4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 NBPF11Q86T75 865 aa4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 GLYCTKQ8IVS8 523 aa4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 ZNF830Q96NB3 372 aaPredicted RBP4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 SLC6A14Q9UN76 642 aa4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 KRBA1A5PL33 1030 aa4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 EREGO14944 169 aa4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 MAP2K3P46734 347 aa4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 AFF1P51825 1210 aaKnown RBP4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 KCNQ4P56696 695 aa4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 LINC00114Q6XXX2 140 aa4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 SGSM3Q96HU1 749 aa4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 LPIN3Q9BQK8 851 aa4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 SMG9Q9H0W8 520 aaKnown RBP4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 RNF19AQ9NV58 838 aa4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 STK17AQ9UEE5 414 aa4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 GDF2Q9UK05 429 aaPredicted RBP4.01□□□□□ -1.77
SNRNP48-202ENST00000496946 GPR182O15218 404 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 PTCD1O75127 700 aaKnown RBP4□□□□□ -1.77
SNRNP48-202ENST00000496946 PDGFAP04085 211 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 RASSF7Q02833 373 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 FAM182BQ5T319 152 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 IER5Q5VY09 327 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 ZNF438Q7Z4V0 828 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms