RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 NBPF5PQ86XG9 351 aaPredicted RBP11.42□□□□□ -0.58
SKAP2-207ENST00000490456 SYNE4Q8N205 404 aa11.42□□□□□ -0.58
SKAP2-207ENST00000490456 TSR2Q969E8 191 aaKnown RBP11.42□□□□□ -0.58
SKAP2-207ENST00000490456 HHIPL1Q96JK4 782 aa11.42□□□□□ -0.58
SKAP2-207ENST00000490456 PSMD1Q99460 953 aa11.42□□□□□ -0.58
SKAP2-207ENST00000490456 USP16Q9Y5T5 823 aa11.42□□□□□ -0.58
SKAP2-207ENST00000490456 ZNF521Q96K83 1311 aa11.41□□□□□ -0.58
SKAP2-207ENST00000490456 ALDH1B1P30837 517 aa11.41□□□□□ -0.58
SKAP2-207ENST00000490456 KRT24Q2M2I5 525 aa11.41□□□□□ -0.58
SKAP2-207ENST00000490456 PRPF38BQ5VTL8 546 aaKnown RBP11.41□□□□□ -0.58
SKAP2-207ENST00000490456 CLEC4GQ6UXB4 293 aa11.41□□□□□ -0.58
SKAP2-207ENST00000490456 DZIP3Q86Y13 1208 aaKnown RBP11.41□□□□□ -0.58
SKAP2-207ENST00000490456 MS4A4AQ96JQ5 239 aa11.41□□□□□ -0.58
SKAP2-207ENST00000490456 ZNF652Q9Y2D9 606 aa11.41□□□□□ -0.58
SKAP2-207ENST00000490456 GJA3Q9Y6H8 435 aa11.41□□□□□ -0.58
SKAP2-207ENST00000490456 SCNN1DP51172 638 aa11.4□□□□□ -0.58
SKAP2-207ENST00000490456 HNRNPUQ00839 825 aaKnown RBP eCLIP11.4□□□□□ -0.58
SKAP2-207ENST00000490456 FMR1Q06787 632 aaKnown RBP eCLIP11.4□□□□□ -0.58
SKAP2-207ENST00000490456 CC2D2BQ6DHV5 1058 aa11.4□□□□□ -0.58
SKAP2-207ENST00000490456 TPTE2Q6XPS3 522 aa11.4□□□□□ -0.58
SKAP2-207ENST00000490456 SAPCD2Q86UD0 394 aa11.4□□□□□ -0.58
SKAP2-207ENST00000490456 SNED1Q8TER0 1413 aa11.4□□□□□ -0.58
SKAP2-207ENST00000490456 FANCIQ9NVI1 1328 aa11.39□□□□□ -0.59
SKAP2-207ENST00000490456 TRAF5O00463 557 aa11.39□□□□□ -0.59
SKAP2-207ENST00000490456 A1BGP04217 495 aa11.39□□□□□ -0.59
SKAP2-207ENST00000490456 EIF2S2P20042 333 aaKnown RBP11.39□□□□□ -0.59
SKAP2-207ENST00000490456 EPS15P42566 896 aa11.39□□□□□ -0.59
SKAP2-207ENST00000490456 PIP4K2AP48426 406 aaPredicted RBP11.39□□□□□ -0.59
SKAP2-207ENST00000490456 OLFM4Q6UX06 510 aa11.39□□□□□ -0.59
SKAP2-207ENST00000490456 MYH16Q9H6N6 1097 aa11.39□□□□□ -0.59
SKAP2-207ENST00000490456 COL4A5P29400 1685 aa11.39□□□□□ -0.59
SKAP2-207ENST00000490456 ELL2O00472 640 aaPredicted RBP11.38□□□□□ -0.59
SKAP2-207ENST00000490456 RGL2O15211 777 aa11.38□□□□□ -0.59
SKAP2-207ENST00000490456 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.59
SKAP2-207ENST00000490456 GRIPAP1Q4V328 841 aa11.38□□□□□ -0.59
SKAP2-207ENST00000490456 DUSP27Q5VZP5 1158 aa11.38□□□□□ -0.59
SKAP2-207ENST00000490456 NECTIN2Q92692 538 aa11.38□□□□□ -0.59
SKAP2-207ENST00000490456 DLG5Q8TDM6 1919 aa11.37□□□□□ -0.59
SKAP2-207ENST00000490456 AKAP11Q9UKA4 1901 aa11.37□□□□□ -0.59
SKAP2-207ENST00000490456 E9PSI1 815 aa11.37□□□□□ -0.59
SKAP2-207ENST00000490456 CELF2O95319 508 aaKnown RBP11.37□□□□□ -0.59
SKAP2-207ENST00000490456 HOXB7P09629 217 aa11.37□□□□□ -0.59
SKAP2-207ENST00000490456 NOGQ13253 232 aa11.37□□□□□ -0.59
SKAP2-207ENST00000490456 HDGFL1Q5TGJ6 251 aa11.37□□□□□ -0.59
SKAP2-207ENST00000490456 CIAPIN1Q6FI81 312 aa11.37□□□□□ -0.59
SKAP2-207ENST00000490456 C8orf58Q8NAV2 365 aa11.37□□□□□ -0.59
SKAP2-207ENST00000490456 ADARB2Q9NS39 739 aaKnown RBP11.37□□□□□ -0.59
SKAP2-207ENST00000490456 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
SKAP2-207ENST00000490456 PBX2P40425 430 aa11.36□□□□□ -0.59
SKAP2-207ENST00000490456 SOX10P56693 466 aa11.36□□□□□ -0.59
SKAP2-207ENST00000490456 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
SKAP2-207ENST00000490456 LARGE2Q8N3Y3 721 aa11.36□□□□□ -0.59
SKAP2-207ENST00000490456 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
SKAP2-207ENST00000490456 TSPYL6Q8N831 410 aa11.36□□□□□ -0.59
SKAP2-207ENST00000490456 NIP7Q9Y221 180 aaKnown RBP eCLIP11.36□□□□□ -0.59
SKAP2-207ENST00000490456 MYL6BP14649 208 aa11.35□□□□□ -0.59
SKAP2-207ENST00000490456 GTF2E1P29083 439 aaPredicted RBP11.35□□□□□ -0.59
SKAP2-207ENST00000490456 EXOSC9Q06265 439 aaKnown RBP11.35□□□□□ -0.59
SKAP2-207ENST00000490456 SLFN5Q08AF3 891 aa11.35□□□□□ -0.59
SKAP2-207ENST00000490456 NIM1KQ8IY84 436 aa11.35□□□□□ -0.59
SKAP2-207ENST00000490456 CDCA7LQ96GN5 454 aa11.35□□□□□ -0.59
SKAP2-207ENST00000490456 SAGE1Q9NXZ1 904 aa11.35□□□□□ -0.59
SKAP2-207ENST00000490456 GPRC5DQ9NZD1 345 aa11.35□□□□□ -0.59
SKAP2-207ENST00000490456 ERBB4Q15303 1308 aa11.35□□□□□ -0.59
SKAP2-207ENST00000490456 KDM3BQ7LBC6 1761 aa11.34□□□□□ -0.59
SKAP2-207ENST00000490456 PROSER3Q2NL68 480 aa11.34□□□□□ -0.59
SKAP2-207ENST00000490456 TWISTNBQ3B726 338 aaPredicted RBP11.34□□□□□ -0.59
SKAP2-207ENST00000490456 CRY2Q49AN0 593 aa11.34□□□□□ -0.59
SKAP2-207ENST00000490456 CDHR2Q9BYE9 1310 aa11.34□□□□□ -0.59
SKAP2-207ENST00000490456 NUP98P52948 1817 aa11.33□□□□□ -0.6
SKAP2-207ENST00000490456 ANXA1P04083 346 aa11.33□□□□□ -0.6
SKAP2-207ENST00000490456 PDIA6Q15084 440 aa11.33□□□□□ -0.6
SKAP2-207ENST00000490456 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
SKAP2-207ENST00000490456 RNF25Q96BH1 459 aaPredicted RBP11.33□□□□□ -0.6
SKAP2-207ENST00000490456 GCC1Q96CN9 775 aa11.33□□□□□ -0.6
SKAP2-207ENST00000490456 GLIS2Q9BZE0 524 aaPredicted RBP11.33□□□□□ -0.6
SKAP2-207ENST00000490456 NYXQ9GZU5 481 aa11.33□□□□□ -0.6
SKAP2-207ENST00000490456 CHPF2Q9P2E5 772 aa11.33□□□□□ -0.6
SKAP2-207ENST00000490456 PGAP2Q9UHJ9 254 aa11.33□□□□□ -0.6
SKAP2-207ENST00000490456 RIC1Q4ADV7 1423 aa11.33□□□□□ -0.6
SKAP2-207ENST00000490456 ZBED9Q6R2W3 1325 aa11.33□□□□□ -0.6
SKAP2-207ENST00000490456 LAMB4A4D0S4 1761 aa11.32□□□□□ -0.6
SKAP2-207ENST00000490456 FAM177BA6PVY3 158 aa11.32□□□□□ -0.6
SKAP2-207ENST00000490456 CCDC30Q5VVM6 783 aa11.32□□□□□ -0.6
SKAP2-207ENST00000490456 CDC37L1Q7L3B6 337 aa11.32□□□□□ -0.6
SKAP2-207ENST00000490456 RPGRQ92834 1020 aaKnown RBP11.32□□□□□ -0.6
SKAP2-207ENST00000490456 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.63e-11■■■■■ 34.9
SKAP2-207ENST00000490456 CHMP4AQ9BY43 222 aa11.32□□□□□ -0.6
SKAP2-207ENST00000490456 VPS33BQ9H267 617 aa11.32□□□□□ -0.6
SKAP2-207ENST00000490456 ZNF408Q9H9D4 720 aa11.32□□□□□ -0.6
SKAP2-207ENST00000490456 DBF4Q9UBU7 674 aaPredicted RBP11.32□□□□□ -0.6
SKAP2-207ENST00000490456 TCERG1O14776 1098 aaKnown RBP11.31□□□□□ -0.6
SKAP2-207ENST00000490456 PPIP5K2O43314 1243 aa11.31□□□□□ -0.6
SKAP2-207ENST00000490456 HOXA10P31260 410 aaPredicted RBP11.31□□□□□ -0.6
SKAP2-207ENST00000490456 HUNKP57058 714 aa11.31□□□□□ -0.6
SKAP2-207ENST00000490456 KIF6Q6ZMV9 814 aa11.31□□□□□ -0.6
SKAP2-207ENST00000490456 LRP10Q7Z4F1 713 aa11.31□□□□□ -0.6
SKAP2-207ENST00000490456 ABCC12Q96J65 1359 aa11.3□□□□□ -0.6
SKAP2-207ENST00000490456 VAMP4O75379 141 aa11.3□□□□□ -0.6
SKAP2-207ENST00000490456 AIMP1Q12904 312 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms