RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 J3QW42 95 aa7.29□□□□□ -1.24
RBM39-235ENST00000490354 DLL1O00548 723 aa7.29□□□□□ -1.24
RBM39-235ENST00000490354 PRR23CQ6ZRP0 262 aa7.29□□□□□ -1.24
RBM39-235ENST00000490354 VTI1AQ96AJ9 217 aa7.29□□□□□ -1.24
RBM39-235ENST00000490354 TLR7Q9NYK1 1049 aaKnown RBP7.29□□□□□ -1.24
RBM39-235ENST00000490354 ERCC6Q03468 1493 aa7.29□□□□□ -1.24
RBM39-235ENST00000490354 MRC2Q9UBG0 1479 aa7.29□□□□□ -1.24
RBM39-235ENST00000490354 URB2Q14146 1524 aaKnown RBP7.28□□□□□ -1.24
RBM39-235ENST00000490354 ALX3O95076 343 aa7.28□□□□□ -1.24
RBM39-235ENST00000490354 ARID4AP29374 1257 aaPredicted RBP7.28□□□□□ -1.24
RBM39-235ENST00000490354 RGL4Q8IZJ4 473 aa7.28□□□□□ -1.24
RBM39-235ENST00000490354 XYLBO75191 536 aa7.27□□□□□ -1.25
RBM39-235ENST00000490354 EGFRP00533 1210 aa7.27□□□□□ -1.25
RBM39-235ENST00000490354 LCE3BQ5TA77 95 aa7.27□□□□□ -1.25
RBM39-235ENST00000490354 GDF6Q6KF10 455 aaPredicted RBP7.27□□□□□ -1.25
RBM39-235ENST00000490354 DZIP1LQ8IYY4 767 aaKnown RBP7.27□□□□□ -1.25
RBM39-235ENST00000490354 CMTR1Q8N1G2 835 aaKnown RBP7.27□□□□□ -1.25
RBM39-235ENST00000490354 PLD4Q96BZ4 506 aa7.27□□□□□ -1.25
RBM39-235ENST00000490354 AKTIPQ9H8T0 292 aa7.27□□□□□ -1.25
RBM39-235ENST00000490354 DNMBPQ6XZF7 1577 aa7.27□□□□□ -1.25
RBM39-235ENST00000490354 KIF27Q86VH2 1401 aa7.27□□□□□ -1.25
RBM39-235ENST00000490354 POLA1P09884 1462 aaPredicted RBP7.26□□□□□ -1.25
RBM39-235ENST00000490354 FGD5Q6ZNL6 1462 aa7.26□□□□□ -1.25
RBM39-235ENST00000490354 LOC102724428A0A0B4J2F2 783 aa7.26□□□□□ -1.25
RBM39-235ENST00000490354 LOC105371045A0A1W2PR82 267 aa7.26□□□□□ -1.25
RBM39-235ENST00000490354 MMP20O60882 483 aa7.26□□□□□ -1.25
RBM39-235ENST00000490354 SIK1P57059 783 aa7.26□□□□□ -1.25
RBM39-235ENST00000490354 TREML1Q86YW5 311 aa7.26□□□□□ -1.25
RBM39-235ENST00000490354 NSUN5Q96P11 429 aaKnown RBP7.26□□□□□ -1.25
RBM39-235ENST00000490354 GHRHP01286 108 aa7.25□□□□□ -1.25
RBM39-235ENST00000490354 PSAPP07602 524 aa7.25□□□□□ -1.25
RBM39-235ENST00000490354 IL22RA1Q8N6P7 574 aa7.25□□□□□ -1.25
RBM39-235ENST00000490354 MRPL18Q9H0U6 180 aaKnown RBP7.25□□□□□ -1.25
RBM39-235ENST00000490354 KCNMB2Q9Y691 235 aa7.25□□□□□ -1.25
RBM39-235ENST00000490354 BIVM-ERCC5R4GMW8 1640 aa7.24□□□□□ -1.25
RBM39-235ENST00000490354 RUSC2Q8N2Y8 1516 aa7.24□□□□□ -1.25
RBM39-235ENST00000490354 F8W735 103 aaPredicted RBP7.24□□□□□ -1.25
RBM39-235ENST00000490354 SETDB1Q15047 1291 aa7.24□□□□□ -1.25
RBM39-235ENST00000490354 COX20Q5RI15 118 aa7.24□□□□□ -1.25
RBM39-235ENST00000490354 TMEM130Q8N3G9 435 aa7.24□□□□□ -1.25
RBM39-235ENST00000490354 FAM200AQ8TCP9 573 aa7.24□□□□□ -1.25
RBM39-235ENST00000490354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.24□□□□□ -1.25
RBM39-235ENST00000490354 RAD54L2Q9Y4B4 1467 aa7.24□□□□□ -1.25
RBM39-235ENST00000490354 ABCA10Q8WWZ4 1543 aa7.23□□□□□ -1.25
RBM39-235ENST00000490354 FSTP19883 344 aa7.23□□□□□ -1.25
RBM39-235ENST00000490354 FKBP5Q13451 457 aaPredicted RBP7.23□□□□□ -1.25
RBM39-235ENST00000490354 TRIM33Q9UPN9 1127 aa7.23□□□□□ -1.25
RBM39-235ENST00000490354 CUX2O14529 1486 aa7.23□□□□□ -1.25
RBM39-235ENST00000490354 WDR62O43379 1518 aa7.22□□□□□ -1.25
RBM39-235ENST00000490354 SOX18P35713 384 aa7.22□□□□□ -1.25
RBM39-235ENST00000490354 CDCA8Q53HL2 280 aa7.22□□□□□ -1.25
RBM39-235ENST00000490354 CFAP70Q5T0N1 1121 aa7.22□□□□□ -1.25
RBM39-235ENST00000490354 AGGF1Q8N302 714 aaeCLIP7.22□□□□□ -1.25
RBM39-235ENST00000490354 RBSNQ9H1K0 784 aa7.22□□□□□ -1.25
RBM39-235ENST00000490354 PCMTD2Q9NV79 361 aa7.22□□□□□ -1.25
RBM39-235ENST00000490354 A6NJR5 290 aa7.21□□□□□ -1.26
RBM39-235ENST00000490354 HOXD8P13378 290 aaPredicted RBP7.21□□□□□ -1.26
RBM39-235ENST00000490354 SSTR4P31391 388 aa7.21□□□□□ -1.26
RBM39-235ENST00000490354 TRIP4Q15650 581 aaPredicted RBP7.21□□□□□ -1.26
RBM39-235ENST00000490354 ETFBKMTQ8IXQ9 262 aa7.21□□□□□ -1.26
RBM39-235ENST00000490354 SRA1Q9HD15 236 aaKnown RBP7.21□□□□□ -1.26
RBM39-235ENST00000490354 IFT140Q96RY7 1462 aa7.21□□□□□ -1.26
RBM39-235ENST00000490354 TDRD9Q8NDG6 1382 aaKnown RBP7.2□□□□□ -1.26
RBM39-235ENST00000490354 Q6ZS46 218 aa7.2□□□□□ -1.26
RBM39-235ENST00000490354 PRIMPOLQ96LW4 560 aa7.2□□□□□ -1.26
RBM39-235ENST00000490354 PRDM2Q13029 1718 aa7.2□□□□□ -1.26
RBM39-235ENST00000490354 PRXQ9BXM0 1461 aa7.19□□□□□ -1.26
RBM39-235ENST00000490354 GLB1P16278 677 aa7.19□□□□□ -1.26
RBM39-235ENST00000490354 RFX1P22670 979 aa7.19□□□□□ -1.26
RBM39-235ENST00000490354 FAM26DQ5JW98 314 aa7.19□□□□□ -1.26
RBM39-235ENST00000490354 MCTP1Q6DN14 999 aa7.19□□□□□ -1.26
RBM39-235ENST00000490354 SLC51AQ86UW1 340 aa7.19□□□□□ -1.26
RBM39-235ENST00000490354 NLRP13Q86W25 1043 aa7.19□□□□□ -1.26
RBM39-235ENST00000490354 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
RBM39-235ENST00000490354 MAP4K3Q8IVH8 894 aa7.19□□□□□ -1.26
RBM39-235ENST00000490354 SAP130Q9H0E3 1048 aa7.19□□□□□ -1.26
RBM39-235ENST00000490354 NOVA2Q9UNW9 492 aaKnown RBP7.19□□□□□ -1.26
RBM39-235ENST00000490354 CARMIL1Q5VZK9 1371 aa7.19□□□□□ -1.26
RBM39-235ENST00000490354 CD97P48960 835 aa7.18□□□□□ -1.26
RBM39-235ENST00000490354 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.18□□□□□ -1.26
RBM39-235ENST00000490354 GALNT11Q8NCW6 608 aa7.18□□□□□ -1.26
RBM39-235ENST00000490354 DCAF11Q8TEB1 546 aa7.18□□□□□ -1.26
RBM39-235ENST00000490354 UBL7Q96S82 380 aaPredicted RBP7.18□□□□□ -1.26
RBM39-235ENST00000490354 RAXQ9Y2V3 346 aa7.18□□□□□ -1.26
RBM39-235ENST00000490354 KIF21AQ7Z4S6 1674 aa7.17□□□□□ -1.26
RBM39-235ENST00000490354 LINC01387J3KSC0 135 aa7.17□□□□□ -1.26
RBM39-235ENST00000490354 PRMT3O60678 531 aa7.17□□□□□ -1.26
RBM39-235ENST00000490354 BRD2P25440 801 aaKnown RBP7.17□□□□□ -1.26
RBM39-235ENST00000490354 COL13A1Q5TAT6 717 aaPredicted RBP7.17□□□□□ -1.26
RBM39-235ENST00000490354 PPME1Q9Y570 386 aa7.17□□□□□ -1.26
RBM39-235ENST00000490354 TNIKQ9UKE5 1360 aa7.17□□□□□ -1.26
RBM39-235ENST00000490354 GAPVD1Q14C86 1478 aa7.17□□□□□ -1.26
RBM39-235ENST00000490354 PTCD1O75127 700 aaKnown RBP7.16□□□□□ -1.26
RBM39-235ENST00000490354 WISP1O95388 367 aa7.16□□□□□ -1.26
RBM39-235ENST00000490354 ATP11AP98196 1134 aa7.16□□□□□ -1.26
RBM39-235ENST00000490354 C16orf46Q6P387 395 aa7.16□□□□□ -1.26
RBM39-235ENST00000490354 TXNDC11Q6PKC3 985 aa7.16□□□□□ -1.26
RBM39-235ENST00000490354 CACTIN-AS1Q8N1I8 211 aa7.16□□□□□ -1.26
RBM39-235ENST00000490354 OR13H1Q8NG92 308 aa7.16□□□□□ -1.26
RBM39-235ENST00000490354 MUC3BQ9H195 1237 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms