RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 DBNLQ9UJU6 430 aaKnown RBP12.23□□□□□ -0.45
USP11-211ENST00000489111 RIPOR2Q9Y4F9 1068 aa12.23□□□□□ -0.45
USP11-211ENST00000489111 PARP3Q9Y6F1 533 aa12.23□□□□□ -0.45
USP11-211ENST00000489111 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.23□□□□□ -0.45
USP11-211ENST00000489111 A0A1B0GUL7 405 aa12.22□□□□□ -0.45
USP11-211ENST00000489111 MMP10P09238 476 aa12.22□□□□□ -0.45
USP11-211ENST00000489111 PUM3Q15397 648 aaKnown RBP12.22□□□□□ -0.45
USP11-211ENST00000489111 TBC1D9Q6ZT07 1266 aa12.22□□□□□ -0.45
USP11-211ENST00000489111 CNTROBQ8N137 903 aa12.22□□□□□ -0.45
USP11-211ENST00000489111 RPGRQ92834 1020 aaKnown RBP12.22□□□□□ -0.45
USP11-211ENST00000489111 DBNDD2Q9BQY9 259 aa12.22□□□□□ -0.45
USP11-211ENST00000489111 RBM19Q9Y4C8 960 aaKnown RBP12.22□□□□□ -0.45
USP11-211ENST00000489111 DDX60Q8IY21 1712 aaKnown RBP12.21□□□□□ -0.45
USP11-211ENST00000489111 PDE8BO95263 885 aa12.2□□□□□ -0.46
USP11-211ENST00000489111 MAP4K4O95819 1239 aaPredicted RBP12.2□□□□□ -0.46
USP11-211ENST00000489111 SLC5A1P13866 664 aa12.2□□□□□ -0.46
USP11-211ENST00000489111 ATP5JP18859 108 aa12.2□□□□□ -0.46
USP11-211ENST00000489111 MFAP1P55081 439 aaKnown RBP12.2□□□□□ -0.46
USP11-211ENST00000489111 TIMM10P62072 90 aa12.2□□□□□ -0.46
USP11-211ENST00000489111 CCDC158Q5M9N0 1113 aa12.2□□□□□ -0.46
USP11-211ENST00000489111 BSDC1Q9NW68 430 aaPredicted RBP12.2□□□□□ -0.46
USP11-211ENST00000489111 IFIT1P09914 478 aaKnown RBP12.19□□□□□ -0.46
USP11-211ENST00000489111 RPS8P62241 208 aaKnown RBP12.19□□□□□ -0.46
USP11-211ENST00000489111 CHRNDQ07001 517 aa12.19□□□□□ -0.46
USP11-211ENST00000489111 TTC39AQ5SRH9 613 aa12.19□□□□□ -0.46
USP11-211ENST00000489111 VGLL2Q8N8G2 317 aa12.19□□□□□ -0.46
USP11-211ENST00000489111 HELBQ8NG08 1087 aaPredicted RBP12.19□□□□□ -0.46
USP11-211ENST00000489111 LPIN2Q92539 896 aa12.19□□□□□ -0.46
USP11-211ENST00000489111 CELF1Q92879 486 aaKnown RBP12.19□□□□□ -0.46
USP11-211ENST00000489111 EVI5LQ96CN4 794 aa12.19□□□□□ -0.46
USP11-211ENST00000489111 RBM17Q96I25 401 aaKnown RBP12.19□□□□□ -0.46
USP11-211ENST00000489111 ADORA1P30542 326 aa12.18□□□□□ -0.46
USP11-211ENST00000489111 ANP32AP39687 249 aaKnown RBP12.18□□□□□ -0.46
USP11-211ENST00000489111 GRAPQ13588 217 aa12.18□□□□□ -0.46
USP11-211ENST00000489111 CRY2Q49AN0 593 aa12.18□□□□□ -0.46
USP11-211ENST00000489111 GRAPLQ8TC17 118 aaPredicted RBP12.18□□□□□ -0.46
USP11-211ENST00000489111 XAGE2Q96GT9 111 aa12.18□□□□□ -0.46
USP11-211ENST00000489111 DNAJC2Q99543 621 aaKnown RBP12.18□□□□□ -0.46
USP11-211ENST00000489111 BRIP1Q9BX63 1249 aa12.18□□□□□ -0.46
USP11-211ENST00000489111 BOLA2Q9H3K6 86 aa12.18□□□□□ -0.46
USP11-211ENST00000489111 TNRC6CQ9HCJ0 1690 aaKnown RBP12.17□□□□□ -0.46
USP11-211ENST00000489111 PDE6BP35913 854 aa12.17□□□□□ -0.46
USP11-211ENST00000489111 KCNJ4P48050 445 aa12.17□□□□□ -0.46
USP11-211ENST00000489111 HAUS7Q99871 368 aa12.17□□□□□ -0.46
USP11-211ENST00000489111 FSD1Q9BTV5 496 aa12.17□□□□□ -0.46
USP11-211ENST00000489111 ANKRD2Q9GZV1 360 aa12.17□□□□□ -0.46
USP11-211ENST00000489111 DIAPH3Q9NSV4 1193 aa12.17□□□□□ -0.46
USP11-211ENST00000489111 MYH3P11055 1940 aa12.17□□□□□ -0.46
USP11-211ENST00000489111 TUBGCP6Q96RT7 1819 aa12.16□□□□□ -0.46
USP11-211ENST00000489111 HIP1O00291 1037 aa12.16□□□□□ -0.46
USP11-211ENST00000489111 TAF5LO75529 589 aa12.16□□□□□ -0.46
USP11-211ENST00000489111 REC8O95072 547 aa12.16□□□□□ -0.46
USP11-211ENST00000489111 SEC24BO95487 1268 aa12.16□□□□□ -0.46
USP11-211ENST00000489111 FGFR2P21802 821 aa12.16□□□□□ -0.46
USP11-211ENST00000489111 CHMLP26374 656 aa12.16□□□□□ -0.46
USP11-211ENST00000489111 SLC16A10Q8TF71 515 aa12.16□□□□□ -0.46
USP11-211ENST00000489111 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.16□□□□□ -0.46
USP11-211ENST00000489111 MINPP1Q9UNW1 487 aa12.16□□□□□ -0.46
USP11-211ENST00000489111 KLRG2A4D1S0 409 aaPredicted RBP12.15□□□□□ -0.46
USP11-211ENST00000489111 UQCRFS1P1P0C7P4 283 aa12.15□□□□□ -0.46
USP11-211ENST00000489111 HOXA10P31260 410 aaPredicted RBP12.15□□□□□ -0.46
USP11-211ENST00000489111 RUFY2Q8WXA3 655 aa12.15□□□□□ -0.46
USP11-211ENST00000489111 CRAMP1Q96RY5 1269 aa12.15□□□□□ -0.46
USP11-211ENST00000489111 PAG1Q9NWQ8 432 aa12.15□□□□□ -0.46
USP11-211ENST00000489111 GOLIM4O00461 696 aa12.14□□□□□ -0.47
USP11-211ENST00000489111 NPR1P16066 1061 aa12.14□□□□□ -0.47
USP11-211ENST00000489111 UBE4AQ14139 1066 aa12.14□□□□□ -0.47
USP11-211ENST00000489111 LRRFIP1Q32MZ4 808 aaKnown RBP12.14□□□□□ -0.47
USP11-211ENST00000489111 TMC4Q7Z404 712 aa12.14□□□□□ -0.47
USP11-211ENST00000489111 ESYT1Q9BSJ8 1104 aa12.14□□□□□ -0.47
USP11-211ENST00000489111 ANKIB1Q9P2G1 1089 aa12.14□□□□□ -0.47
USP11-211ENST00000489111 RFX7Q2KHR2 1363 aa12.14□□□□□ -0.47
USP11-211ENST00000489111 PPEF1O14829 653 aaPredicted RBP12.13□□□□□ -0.47
USP11-211ENST00000489111 BBOX1O75936 387 aa12.13□□□□□ -0.47
USP11-211ENST00000489111 FKBP4Q02790 459 aaKnown RBP eCLIP12.13□□□□□ -0.47
USP11-211ENST00000489111 CAVIN4Q5BKX8 364 aa12.13□□□□□ -0.47
USP11-211ENST00000489111 CCDC102BQ68D86 513 aa12.13□□□□□ -0.47
USP11-211ENST00000489111 VPS37DQ86XT2 251 aa12.13□□□□□ -0.47
USP11-211ENST00000489111 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.47
USP11-211ENST00000489111 ZNF512BQ96KM6 892 aaPredicted RBP12.13□□□□□ -0.47
USP11-211ENST00000489111 TBC1D32Q96NH3 1257 aa12.13□□□□□ -0.47
USP11-211ENST00000489111 C22orf23Q9BZE7 217 aa12.13□□□□□ -0.47
USP11-211ENST00000489111 GNL3LQ9NVN8 582 aaKnown RBP12.13□□□□□ -0.47
USP11-211ENST00000489111 QSER1Q2KHR3 1735 aa12.13□□□□□ -0.47
USP11-211ENST00000489111 COL4A1P02462 1669 aa12.13□□□□□ -0.47
USP11-211ENST00000489111 XDHP47989 1333 aa12.12□□□□□ -0.47
USP11-211ENST00000489111 SNAP23O00161 211 aa12.12□□□□□ -0.47
USP11-211ENST00000489111 SRGNP10124 158 aa12.12□□□□□ -0.47
USP11-211ENST00000489111 ARID4AP29374 1257 aaPredicted RBP12.12□□□□□ -0.47
USP11-211ENST00000489111 PHKA1P46020 1223 aa12.12□□□□□ -0.47
USP11-211ENST00000489111 C2CD5Q86YS7 1000 aa12.12□□□□□ -0.47
USP11-211ENST00000489111 KBTBD3Q8NAB2 608 aa12.12□□□□□ -0.47
USP11-211ENST00000489111 EDC3Q96F86 508 aaKnown RBP12.12□□□□□ -0.47
USP11-211ENST00000489111 MASTLQ96GX5 879 aa12.12□□□□□ -0.47
USP11-211ENST00000489111 PDGFDQ9GZP0 370 aaPredicted RBP12.12□□□□□ -0.47
USP11-211ENST00000489111 TMX4Q9H1E5 349 aaPredicted RBP12.12□□□□□ -0.47
USP11-211ENST00000489111 SNRKQ9NRH2 765 aa12.12□□□□□ -0.47
USP11-211ENST00000489111 NDUFB9Q9Y6M9 179 aa12.12□□□□□ -0.47
USP11-211ENST00000489111 ZNF804BA4D1E1 1349 aa12.11□□□□□ -0.47
USP11-211ENST00000489111 RAD50Q92878 1312 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms