RNA–Protein interactions for RNA: ENST00000488965.1

SCP2-212, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-212ENST00000488965 VPS53Q5VIR6 699 aa8.14□□□□□ -1.11
SCP2-212ENST00000488965 CCDC24Q8N4L8 307 aa8.14□□□□□ -1.11
SCP2-212ENST00000488965 SNX21Q969T3 373 aa8.14□□□□□ -1.11
SCP2-212ENST00000488965 C8orf37Q96NL8 207 aa8.14□□□□□ -1.11
SCP2-212ENST00000488965 NOL10Q9BSC4 688 aaKnown RBP8.14□□□□□ -1.11
SCP2-212ENST00000488965 UTYO14607 1347 aa8.14□□□□□ -1.11
SCP2-212ENST00000488965 NWD2Q9ULI1 1742 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 PKP1Q13835 747 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 POLA2Q14181 598 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 CKAP2LQ8IYA6 745 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 ANTXR1Q9H6X2 564 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 COL15A1P39059 1388 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 STX6O43752 255 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 PHKG2P15735 406 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 FAM173BQ6P4H8 233 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 ZSCAN31Q96LW9 406 aaPredicted RBP8.13□□□□□ -1.11
SCP2-212ENST00000488965 ZNF831Q5JPB2 1677 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 KINO60870 393 aaKnown RBP8.13□□□□□ -1.11
SCP2-212ENST00000488965 ATP6V1AP38606 617 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 SAFBQ15424 915 aaKnown RBP eCLIP8.13□□□□□ -1.11
SCP2-212ENST00000488965 IMMTQ16891 758 aaKnown RBP8.13□□□□□ -1.11
SCP2-212ENST00000488965 BEND3Q5T5X7 828 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 LRP10Q7Z4F1 713 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 KIF2CQ99661 725 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 TRIM5Q9C035 493 aa8.13□□□□□ -1.11
SCP2-212ENST00000488965 R3HCC1Q9Y3T6 440 aaKnown RBP8.13□□□□□ -1.11
SCP2-212ENST00000488965 MARCH6O60337 910 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 XRCC6P12956 609 aaKnown RBP eCLIP8.12□□□□□ -1.112e-8■■■□□ 17.8
SCP2-212ENST00000488965 HCLS1P14317 486 aaPredicted RBP8.12□□□□□ -1.11
SCP2-212ENST00000488965 GCKRQ14397 625 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 KRT32Q14532 448 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 METTL22Q9BUU2 404 aaPredicted RBP8.12□□□□□ -1.11
SCP2-212ENST00000488965 JAG2Q9Y219 1238 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 CNPY2Q9Y2B0 182 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 AKAP2Q9Y2D5 859 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 U3KPZ7 1027 aaPredicted RBP8.12□□□□□ -1.11
SCP2-212ENST00000488965 TPM4P67936 248 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 MTX1Q13505 466 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 PDIA6Q15084 440 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 DDB1Q16531 1140 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 EAF2Q96CJ1 260 aaPredicted RBP8.12□□□□□ -1.11
SCP2-212ENST00000488965 NEK1Q96PY6 1258 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 TNMDQ9H2S6 317 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 DISP2A7MBM2 1401 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 PRIM1P49642 420 aaKnown RBP8.12□□□□□ -1.11
SCP2-212ENST00000488965 ATP2B3Q16720 1220 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 IL17RAQ96F46 866 aa8.12□□□□□ -1.11
SCP2-212ENST00000488965 AOX1Q06278 1338 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 UBAP1LF5GYI3 381 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 DDIT3P35638 169 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 RAB3GAP1Q15042 981 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 SSH3Q8TE77 659 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 SART3Q15020 963 aaKnown RBP8.11□□□□□ -1.11
SCP2-212ENST00000488965 DZIP3Q86Y13 1208 aaKnown RBP8.11□□□□□ -1.11
SCP2-212ENST00000488965 NAPBQ9H115 298 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 WDR17Q8IZU2 1322 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 NEURL1BA8MQ27 555 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 ESPNB1AK53 854 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 NKX1-1Q15270 411 aaPredicted RBP8.11□□□□□ -1.11
SCP2-212ENST00000488965 CREB3L3Q68CJ9 461 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 MICU3Q86XE3 530 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 FAM13BQ9NYF5 915 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 TLR7Q9NYK1 1049 aaKnown RBP8.11□□□□□ -1.11
SCP2-212ENST00000488965 STAP2Q9UGK3 403 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 CTNNA3Q9UI47 895 aa8.11□□□□□ -1.11
SCP2-212ENST00000488965 ZNF335Q9H4Z2 1342 aaPredicted RBP8.11□□□□□ -1.11
SCP2-212ENST00000488965 GOLGA8BA8MQT2 603 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 POLR3DP05423 398 aaPredicted RBP8.1□□□□□ -1.11
SCP2-212ENST00000488965 CDK11BP21127 795 aaKnown RBP8.1□□□□□ -1.11
SCP2-212ENST00000488965 ATP2B2Q01814 1243 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 DNM1Q05193 864 aaKnown RBP8.1□□□□□ -1.11
SCP2-212ENST00000488965 TPD52L1Q16890 204 aaPredicted RBP8.1□□□□□ -1.11
SCP2-212ENST00000488965 SEC62Q99442 399 aaKnown RBP8.1□□□□□ -1.11
SCP2-212ENST00000488965 NACAP1Q9BZK3 213 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 GNL3LQ9NVN8 582 aaKnown RBP8.1□□□□□ -1.11
SCP2-212ENST00000488965 USP25Q9UHP3 1055 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 NIP7Q9Y221 180 aaKnown RBP eCLIP8.1□□□□□ -1.11
SCP2-212ENST00000488965 USP42Q9H9J4 1324 aaKnown RBP8.1□□□□□ -1.11
SCP2-212ENST00000488965 CCDC69A6NI79 296 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 ZNF213O14771 459 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 SGSM2O43147 1006 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 KCNQ4P56696 695 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 GIMAP6Q6P9H5 292 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 AMOTL1Q8IY63 956 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 NUP62CLQ9H1M0 184 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 ZNF219Q9P2Y4 722 aaPredicted RBP8.1□□□□□ -1.11
SCP2-212ENST00000488965 PCDH11XQ9BZA7 1347 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 PCDH11YQ9BZA8 1340 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 A0A1B0GUL7 405 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 IRS4O14654 1257 aaPredicted RBP8.1□□□□□ -1.11
SCP2-212ENST00000488965 RXRAP19793 462 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 IL15P40933 162 aaPredicted RBP8.1□□□□□ -1.11
SCP2-212ENST00000488965 SH2B1Q9NRF2 756 aaPredicted RBP8.1□□□□□ -1.11
SCP2-212ENST00000488965 PAG1Q9NWQ8 432 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 ASAP1Q9ULH1 1129 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 DOT1LQ8TEK3 1739 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 ZPR1O75312 459 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 PTH1RQ03431 593 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 TNNI3KQ59H18 835 aa8.1□□□□□ -1.11
SCP2-212ENST00000488965 SLC9C2Q5TAH2 1124 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms