RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 CCDC66A2RUB6 948 aa9.06□□□□□ -0.96
BEST3-205ENST00000488961 BRD1O95696 1058 aa9.06□□□□□ -0.96
BEST3-205ENST00000488961 METTL22Q9BUU2 404 aaPredicted RBP9.06□□□□□ -0.96
BEST3-205ENST00000488961 NCOA5Q9HCD5 579 aaKnown RBP9.06□□□□□ -0.96
BEST3-205ENST00000488961 CCDC39Q9UFE4 941 aa9.06□□□□□ -0.96
BEST3-205ENST00000488961 DENND2AQ9ULE3 1009 aa9.06□□□□□ -0.96
BEST3-205ENST00000488961 RPAP1Q9BWH6 1393 aaPredicted RBP9.06□□□□□ -0.96
BEST3-205ENST00000488961 ADAMTS2O95450 1211 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 PTMAP06454 111 aaKnown RBP9.05□□□□□ -0.96
BEST3-205ENST00000488961 MCM5P33992 734 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 FMNL2Q96PY5 1086 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.05□□□□□ -0.96
BEST3-205ENST00000488961 TULP2O00295 520 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 CLGNO14967 610 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 SLC27A2O14975 620 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 HCLS1P14317 486 aaPredicted RBP9.05□□□□□ -0.96
BEST3-205ENST00000488961 GTF2F1P35269 517 aaKnown RBP eCLIP9.05□□□□□ -0.96
BEST3-205ENST00000488961 FAM193AP78312 1265 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 CCDC171Q6TFL3 1326 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 KDM3BQ7LBC6 1761 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 DNAJC10Q8IXB1 793 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 PRIMPOLQ96LW4 560 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 TMX1Q9H3N1 280 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 GJB4Q9NTQ9 266 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 TBC1D2BQ9UPU7 963 aa9.05□□□□□ -0.96
BEST3-205ENST00000488961 TUBGCP6Q96RT7 1819 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 STX6O43752 255 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 TNNI3KQ59H18 835 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 OTUD7BQ6GQQ9 843 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 TMED8Q6PL24 325 aaPredicted RBP9.04□□□□□ -0.96
BEST3-205ENST00000488961 CKAP2LQ8IYA6 745 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 ZCRB1Q8TBF4 217 aaKnown RBP9.04□□□□□ -0.96
BEST3-205ENST00000488961 TTC14Q96N46 770 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 IQSEC3Q9UPP2 1182 aaPredicted RBP9.04□□□□□ -0.96
BEST3-205ENST00000488961 CYP46A1Q9Y6A2 500 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 FPGT-TNNI3KV9GXZ4 949 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 STRCP1A6NGW2 1772 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 HMGN5P82970 282 aaKnown RBP9.04□□□□□ -0.96
BEST3-205ENST00000488961 CCDC24Q8N4L8 307 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 GPATCH3Q96I76 525 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 INCENPQ9NQS7 918 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 LIMCH1Q9UPQ0 1083 aa9.04□□□□□ -0.96
BEST3-205ENST00000488961 NUTM2BA6NNL0 878 aaPredicted RBP9.03□□□□□ -0.96
BEST3-205ENST00000488961 NUTM2EB1AL46 878 aaPredicted RBP9.03□□□□□ -0.96
BEST3-205ENST00000488961 ALDH1L1O75891 902 aa9.03□□□□□ -0.96
BEST3-205ENST00000488961 ADRA2BP18089 450 aa9.03□□□□□ -0.96
BEST3-205ENST00000488961 RXRAP19793 462 aa9.03□□□□□ -0.96
BEST3-205ENST00000488961 SCARF1Q14162 830 aa9.03□□□□□ -0.96
BEST3-205ENST00000488961 HLFQ16534 295 aa9.03□□□□□ -0.96
BEST3-205ENST00000488961 FAM182BQ5T319 152 aa9.03□□□□□ -0.96
BEST3-205ENST00000488961 NUTM2AQ8IVF1 878 aaPredicted RBP9.03□□□□□ -0.96
BEST3-205ENST00000488961 BTG4Q9NY30 223 aa9.03□□□□□ -0.96
BEST3-205ENST00000488961 USP25Q9UHP3 1055 aa9.03□□□□□ -0.96
BEST3-205ENST00000488961 WTIPA6NIX2 430 aaPredicted RBP9.03□□□□□ -0.96
BEST3-205ENST00000488961 GABPB1Q06547 395 aaPredicted RBP9.03□□□□□ -0.96
BEST3-205ENST00000488961 SPC24Q8NBT2 197 aa9.03□□□□□ -0.96
BEST3-205ENST00000488961 EVI5LQ96CN4 794 aa9.03□□□□□ -0.96
BEST3-205ENST00000488961 CWC22Q9HCG8 908 aaKnown RBP9.03□□□□□ -0.96
BEST3-205ENST00000488961 ZNF445P59923 1031 aa9.02□□□□□ -0.96
BEST3-205ENST00000488961 GORABQ5T7V8 394 aa9.02□□□□□ -0.96
BEST3-205ENST00000488961 LARP1BQ659C4 914 aaKnown RBP9.02□□□□□ -0.96
BEST3-205ENST00000488961 LRP10Q7Z4F1 713 aa9.02□□□□□ -0.96
BEST3-205ENST00000488961 BRF1Q92994 677 aa9.02□□□□□ -0.96
BEST3-205ENST00000488961 DCAF5Q96JK2 942 aa9.02□□□□□ -0.96
BEST3-205ENST00000488961 OGFRQ9NZT2 677 aa9.02□□□□□ -0.96
BEST3-205ENST00000488961 ZKSCAN1P17029 563 aaPredicted RBP9.02□□□□□ -0.97
BEST3-205ENST00000488961 APOBRQ0VD83 1088 aa9.02□□□□□ -0.97
BEST3-205ENST00000488961 CUL4AQ13619 759 aa9.02□□□□□ -0.97
BEST3-205ENST00000488961 WASHC4Q2M389 1173 aa9.02□□□□□ -0.97
BEST3-205ENST00000488961 CCDC144CPQ8IYA2 1237 aa9.02□□□□□ -0.97
BEST3-205ENST00000488961 NKX2-3Q8TAU0 364 aa9.02□□□□□ -0.97
BEST3-205ENST00000488961 SLAIN2Q9P270 581 aa9.02□□□□□ -0.97
BEST3-205ENST00000488961 FEZ2Q9UHY8 353 aaPredicted RBP9.02□□□□□ -0.97
BEST3-205ENST00000488961 MST1RQ04912 1400 aa9.02□□□□□ -0.97
BEST3-205ENST00000488961 AFDNP55196 1824 aaKnown RBP9.02□□□□□ -0.97
BEST3-205ENST00000488961 ZSCAN22P10073 491 aaPredicted RBP9.02□□□□□ -0.97
BEST3-205ENST00000488961 NECTIN1Q15223 517 aa9.02□□□□□ -0.97
BEST3-205ENST00000488961 HSP90AB4PQ58FF6 505 aa9.02□□□□□ -0.97
BEST3-205ENST00000488961 Q6ZUG5 572 aa9.02□□□□□ -0.97
BEST3-205ENST00000488961 STOX1Q6ZVD7 989 aa9.02□□□□□ -0.97
BEST3-205ENST00000488961 GEMIN8Q9NWZ8 242 aaKnown RBP9.02□□□□□ -0.97
BEST3-205ENST00000488961 BAZ2BQ9UIF8 2168 aaKnown RBP9.01□□□□□ -0.97
BEST3-205ENST00000488961 CYP21A2P08686 494 aa9.01□□□□□ -0.97
BEST3-205ENST00000488961 PTMSP20962 102 aa9.01□□□□□ -0.97
BEST3-205ENST00000488961 TNNT3P45378 269 aaPredicted RBP9.01□□□□□ -0.97
BEST3-205ENST00000488961 RFX5P48382 616 aaPredicted RBP9.01□□□□□ -0.97
BEST3-205ENST00000488961 BLOC1S2Q6QNY1 142 aa9.01□□□□□ -0.97
BEST3-205ENST00000488961 SPATA31A3Q5VYP0 1347 aa9.01□□□□□ -0.97
BEST3-205ENST00000488961 F13A1P00488 732 aa9.01□□□□□ -0.97
BEST3-205ENST00000488961 HOXB7P09629 217 aa9.01□□□□□ -0.97
BEST3-205ENST00000488961 TOB2Q14106 344 aaPredicted RBP9.01□□□□□ -0.97
BEST3-205ENST00000488961 TERF2Q15554 542 aa9.01□□□□□ -0.97
BEST3-205ENST00000488961 SLC4A8Q2Y0W8 1093 aa9.01□□□□□ -0.97
BEST3-205ENST00000488961 CADPS2Q86UW7 1296 aa9.01□□□□□ -0.97
BEST3-205ENST00000488961 RUFY2Q8WXA3 655 aa9.01□□□□□ -0.97
BEST3-205ENST00000488961 ANKRD7Q92527 254 aa9.01□□□□□ -0.97
BEST3-205ENST00000488961 LMO7Q8WWI1 1683 aa9.01□□□□□ -0.97
BEST3-205ENST00000488961 ZNF609O15014 1411 aa9□□□□□ -0.97
BEST3-205ENST00000488961 TAF5LO75529 589 aa9□□□□□ -0.97
BEST3-205ENST00000488961 LIG1P18858 919 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms