RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 KCNV2Q8TDN2 545 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 ARHGEF5Q12774 1597 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 ADGRF5Q8IZF2 1346 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 NSD3Q9BZ95 1437 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 MYL1P05976 194 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 FESP07332 822 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 TRIM27P14373 513 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 TPD52L1Q16890 204 aaPredicted RBP7.35□□□□□ -1.23
SIK3-212ENST00000488337 MYSM1Q5VVJ2 828 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 TMEM132EQ6IEE7 984 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 IFT57Q9NWB7 429 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 ERCC6L2Q5T890 1561 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 SPDYE3A6NKU9 549 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 FSBPO95073 299 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 CCZ1BP86790 482 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 CCZ1P86791 482 aaPredicted RBP7.35□□□□□ -1.23
SIK3-212ENST00000488337 CCDC144BQ3MJ40 725 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 CCDC144CPQ8IYA2 1237 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 CCAR2Q8N163 923 aaKnown RBP7.35□□□□□ -1.23
SIK3-212ENST00000488337 SNRNP27Q8WVK2 155 aaKnown RBP7.35□□□□□ -1.23
SIK3-212ENST00000488337 SSH1Q8WYL5 1049 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 CABS1Q96KC9 395 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 CROCC2H7BZ55 1655 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 TPD52L2O43399 206 aaKnown RBP7.35□□□□□ -1.23
SIK3-212ENST00000488337 SMARCA5O60264 1052 aaPredicted RBP7.35□□□□□ -1.23
SIK3-212ENST00000488337 IQCB1Q15051 598 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 PTPN14Q15678 1187 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 LRRC8AQ8IWT6 810 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 CLIC6Q96NY7 704 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 ODF2LQ9ULJ1 636 aa7.35□□□□□ -1.23
SIK3-212ENST00000488337 NOB1Q9ULX3 412 aaKnown RBP7.35□□□□□ -1.23
SIK3-212ENST00000488337 FANCGO15287 622 aa7.34□□□□□ -1.23
SIK3-212ENST00000488337 MCM6Q14566 821 aa7.34□□□□□ -1.23
SIK3-212ENST00000488337 IQCA1Q86XH1 822 aa7.34□□□□□ -1.23
SIK3-212ENST00000488337 SPC24Q8NBT2 197 aa7.34□□□□□ -1.23
SIK3-212ENST00000488337 ZCCHC11Q5TAX3 1644 aaKnown RBP7.34□□□□□ -1.23
SIK3-212ENST00000488337 FCHSD2O94868 740 aa7.34□□□□□ -1.23
SIK3-212ENST00000488337 ZNF24P17028 368 aa7.34□□□□□ -1.23
SIK3-212ENST00000488337 NUCB1Q02818 461 aa7.34□□□□□ -1.23
SIK3-212ENST00000488337 CD248Q9HCU0 757 aa7.34□□□□□ -1.23
SIK3-212ENST00000488337 ARGLU1Q9NWB6 273 aaPredicted RBP7.34□□□□□ -1.23
SIK3-212ENST00000488337 EVC2Q86UK5 1308 aa7.34□□□□□ -1.23
SIK3-212ENST00000488337 PKN1Q16512 942 aa7.34□□□□□ -1.24
SIK3-212ENST00000488337 RSRC2Q7L4I2 434 aaKnown RBP7.34□□□□□ -1.24
SIK3-212ENST00000488337 HELBQ8NG08 1087 aaPredicted RBP7.34□□□□□ -1.24
SIK3-212ENST00000488337 HNRNPLLQ8WVV9 542 aaKnown RBP7.34□□□□□ -1.24
SIK3-212ENST00000488337 ZBTB10Q96DT7 871 aa7.34□□□□□ -1.24
SIK3-212ENST00000488337 MYOM1P52179 1685 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 DUOX2Q9NRD8 1548 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 EFCAB8A8MWE9 144 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 NF2P35240 595 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 ZNF75DP51815 510 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 SFMBT2Q5VUG0 894 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 TMEM57Q8N5G2 664 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 SLC35B4Q969S0 331 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 SHPRHQ149N8 1683 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 RASSF9O75901 435 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 MAGEA10P43363 369 aaPredicted RBP7.33□□□□□ -1.24
SIK3-212ENST00000488337 APOBRQ0VD83 1088 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 TBC1D9Q6ZT07 1266 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 CHD1LQ86WJ1 897 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 SPDYE1Q8NFV5 336 aaPredicted RBP7.33□□□□□ -1.24
SIK3-212ENST00000488337 DDX20Q9UHI6 824 aaKnown RBP7.33□□□□□ -1.24
SIK3-212ENST00000488337 PCDHGC5Q9Y5F6 944 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 IQSEC2Q5JU85 1478 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 AHCYL1O43865 530 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 NBPF7P0C2Y1 421 aaPredicted RBP7.33□□□□□ -1.24
SIK3-212ENST00000488337 KCNJ6P48051 423 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 CUL4AQ13619 759 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 TDRD7Q8NHU6 1098 aaKnown RBP7.33□□□□□ -1.24
SIK3-212ENST00000488337 FMNL2Q96PY5 1086 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 EPAS1Q99814 870 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 ATP6V0A4Q9HBG4 840 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 TRPV5Q9NQA5 729 aa7.33□□□□□ -1.24
SIK3-212ENST00000488337 SLC27A2O14975 620 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 NEMFO60524 1076 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 TUBB4AP04350 444 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 TMPOP42166 694 aaKnown RBP7.32□□□□□ -1.24
SIK3-212ENST00000488337 DEUP1Q05D60 604 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 SDCCAG8Q86SQ7 713 aaPredicted RBP7.32□□□□□ -1.24
SIK3-212ENST00000488337 USP48Q86UV5 1035 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 NECTIN2Q92692 538 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 FILIP1LQ4L180 1135 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 FAM228AQ86W67 206 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 GGNBP2Q9H3C7 697 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 PICK1Q9NRD5 415 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 ELL2O00472 640 aaPredicted RBP7.32□□□□□ -1.24
SIK3-212ENST00000488337 EPB41L2O43491 1005 aaKnown RBP7.32□□□□□ -1.24
SIK3-212ENST00000488337 USP5P45974 858 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 LIG3P49916 1009 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 INHBCP55103 352 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 NUTM2DQ5VT03 806 aaPredicted RBP7.32□□□□□ -1.24
SIK3-212ENST00000488337 TRIM42Q8IWZ5 723 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 DDX11Q96FC9 970 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 IQCGQ9H095 443 aaKnown RBP7.32□□□□□ -1.24
SIK3-212ENST00000488337 A0A1B0GUA9 196 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 IFT88Q13099 833 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 CWF19L1Q69YN2 538 aaKnown RBP7.32□□□□□ -1.24
SIK3-212ENST00000488337 MFN1Q8IWA4 741 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 LSM14AQ8ND56 463 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms