RNA–Protein interactions for RNA: ENST00000483062.5

SYN3-212, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-212ENST00000483062 PDIA6Q15084 440 aa10.4□□□□□ -0.74
SYN3-212ENST00000483062 FBXO46Q6PJ61 603 aaPredicted RBP10.4□□□□□ -0.74
SYN3-212ENST00000483062 GRAPLQ8TC17 118 aaPredicted RBP10.4□□□□□ -0.74
SYN3-212ENST00000483062 DCPSQ96C86 337 aaKnown RBP10.4□□□□□ -0.74
SYN3-212ENST00000483062 UTP14AQ9BVJ6 771 aaKnown RBP10.4□□□□□ -0.74
SYN3-212ENST00000483062 CFHR5Q9BXR6 569 aa10.4□□□□□ -0.74
SYN3-212ENST00000483062 A0A0C4DFX4 3053 aa10.39□□□□□ -0.75
SYN3-212ENST00000483062 TBC1D8O95759 1140 aa10.39□□□□□ -0.75
SYN3-212ENST00000483062 VIL1P09327 827 aaKnown RBP10.39□□□□□ -0.75
SYN3-212ENST00000483062 MYL6BP14649 208 aa10.39□□□□□ -0.75
SYN3-212ENST00000483062 FKBP1BP68106 108 aa10.39□□□□□ -0.75
SYN3-212ENST00000483062 CDCA5Q96FF9 252 aa10.39□□□□□ -0.75
SYN3-212ENST00000483062 NUDCQ9Y266 331 aa10.39□□□□□ -0.75
SYN3-212ENST00000483062 ERBB4Q15303 1308 aa10.38□□□□□ -0.75
SYN3-212ENST00000483062 GPR25O00155 361 aa10.38□□□□□ -0.75
SYN3-212ENST00000483062 PRKAR2AP13861 404 aaKnown RBP10.38□□□□□ -0.75
SYN3-212ENST00000483062 HCLS1P14317 486 aaPredicted RBP10.38□□□□□ -0.75
SYN3-212ENST00000483062 ZNF280AP59817 542 aaPredicted RBP10.38□□□□□ -0.75
SYN3-212ENST00000483062 CNGB1Q14028 1251 aaPredicted RBP10.38□□□□□ -0.75
SYN3-212ENST00000483062 TMC4Q7Z404 712 aa10.38□□□□□ -0.75
SYN3-212ENST00000483062 GGA3Q9NZ52 723 aa10.38□□□□□ -0.75
SYN3-212ENST00000483062 POLLQ9UGP5 575 aa10.38□□□□□ -0.75
SYN3-212ENST00000483062 ANKRD36CQ5JPF3 1778 aa10.38□□□□□ -0.75
SYN3-212ENST00000483062 ZNF609O15014 1411 aa10.37□□□□□ -0.75
SYN3-212ENST00000483062 U2AF1L5P0DN76 240 aaPredicted RBP10.37□□□□□ -0.75
SYN3-212ENST00000483062 U2AF1Q01081 240 aaKnown RBP eCLIP10.37□□□□□ -0.75
SYN3-212ENST00000483062 WASHC4Q2M389 1173 aa10.37□□□□□ -0.75
SYN3-212ENST00000483062 KIF4BQ2VIQ3 1234 aa10.37□□□□□ -0.75
SYN3-212ENST00000483062 NLRP10Q86W26 655 aa10.37□□□□□ -0.75
SYN3-212ENST00000483062 SULF1Q8IWU6 871 aa10.37□□□□□ -0.75
SYN3-212ENST00000483062 GMLQ99445 158 aa10.37□□□□□ -0.75
SYN3-212ENST00000483062 R3HDMLQ9H3Y0 253 aa10.37□□□□□ -0.75
SYN3-212ENST00000483062 DBNDD1Q9H9R9 158 aa10.37□□□□□ -0.75
SYN3-212ENST00000483062 HDAC9Q9UKV0 1011 aa10.37□□□□□ -0.75
SYN3-212ENST00000483062 POTEFA5A3E0 1075 aa10.36□□□□□ -0.75
SYN3-212ENST00000483062 RBM26Q5T8P6 1007 aaKnown RBP10.36□□□□□ -0.75
SYN3-212ENST00000483062 MOB2Q70IA6 237 aa10.36□□□□□ -0.75
SYN3-212ENST00000483062 DDX46Q7L014 1031 aaKnown RBP10.36□□□□□ -0.75
SYN3-212ENST00000483062 PNISRQ8TF01 805 aaKnown RBP10.36□□□□□ -0.75
SYN3-212ENST00000483062 RANBP2P49792 3224 aaKnown RBP10.36□□□□□ -0.75
SYN3-212ENST00000483062 ECE2O60344 883 aa10.35□□□□□ -0.75
SYN3-212ENST00000483062 SCARF1Q14162 830 aa10.35□□□□□ -0.75
SYN3-212ENST00000483062 PROSER3Q2NL68 480 aa10.35□□□□□ -0.75
SYN3-212ENST00000483062 NECTIN2Q92692 538 aa10.35□□□□□ -0.75
SYN3-212ENST00000483062 AKAP11Q9UKA4 1901 aa10.35□□□□□ -0.75
SYN3-212ENST00000483062 PITPNM2Q9BZ72 1349 aa10.34□□□□□ -0.75
SYN3-212ENST00000483062 POLR2AP24928 1970 aaKnown RBP10.34□□□□□ -0.75
SYN3-212ENST00000483062 UBE2Q2LH0YL09 131 aa10.34□□□□□ -0.75
SYN3-212ENST00000483062 FKTNO75072 461 aa10.34□□□□□ -0.75
SYN3-212ENST00000483062 GPSM2P81274 684 aa10.34□□□□□ -0.75
SYN3-212ENST00000483062 SF3B3Q15393 1217 aaKnown RBP10.34□□□□□ -0.75
SYN3-212ENST00000483062 DOK7Q18PE1 504 aa10.34□□□□□ -0.75
SYN3-212ENST00000483062 ANGEL2Q5VTE6 544 aaKnown RBP10.34□□□□□ -0.75
SYN3-212ENST00000483062 CELF1Q92879 486 aaKnown RBP10.34□□□□□ -0.75
SYN3-212ENST00000483062 THUMPD2Q9BTF0 503 aaKnown RBP10.34□□□□□ -0.75
SYN3-212ENST00000483062 NSFL1CQ9UNZ2 370 aaKnown RBP10.34□□□□□ -0.75
SYN3-212ENST00000483062 LAMB2P55268 1798 aa10.34□□□□□ -0.75
SYN3-212ENST00000483062 SH3TC1Q8TE82 1336 aa10.33□□□□□ -0.76
SYN3-212ENST00000483062 LRRC37AA6NMS7 1700 aa10.33□□□□□ -0.76
SYN3-212ENST00000483062 RIMBP2O15034 1052 aa10.33□□□□□ -0.76
SYN3-212ENST00000483062 TCIRG1Q13488 830 aa10.33□□□□□ -0.76
SYN3-212ENST00000483062 INTS3Q68E01 1043 aaKnown RBP10.33□□□□□ -0.76
SYN3-212ENST00000483062 AGBL3Q8NEM8 1001 aa10.33□□□□□ -0.76
SYN3-212ENST00000483062 TBC1D16Q8TBP0 767 aa10.33□□□□□ -0.76
SYN3-212ENST00000483062 PODXL2Q9NZ53 605 aa10.33□□□□□ -0.76
SYN3-212ENST00000483062 PAPPA2Q9BXP8 1791 aa10.33□□□□□ -0.76
SYN3-212ENST00000483062 DDX10Q13206 875 aaKnown RBP10.32□□□□□ -0.76
SYN3-212ENST00000483062 RSBN1LQ6PCB5 846 aaPredicted RBP10.32□□□□□ -0.76
SYN3-212ENST00000483062 OTOP1Q7RTM1 612 aa10.32□□□□□ -0.76
SYN3-212ENST00000483062 PLEKHF1Q96S99 279 aa10.32□□□□□ -0.76
SYN3-212ENST00000483062 TRMT112Q9UI30 125 aaKnown RBP10.32□□□□□ -0.76
SYN3-212ENST00000483062 KIAA0100Q14667 2235 aaKnown RBP10.31□□□□□ -0.76
SYN3-212ENST00000483062 COL4A1P02462 1669 aa10.31□□□□□ -0.76
SYN3-212ENST00000483062 C6orf229H3BNL8 230 aa10.31□□□□□ -0.76
SYN3-212ENST00000483062 ANXA1P04083 346 aa10.31□□□□□ -0.76
SYN3-212ENST00000483062 HSP90AB3PQ58FF7 597 aa10.31□□□□□ -0.76
SYN3-212ENST00000483062 LDLRAD1Q5T700 205 aa10.31□□□□□ -0.76
SYN3-212ENST00000483062 COPS6Q7L5N1 327 aa10.31□□□□□ -0.76
SYN3-212ENST00000483062 ARMC5Q96C12 935 aa10.31□□□□□ -0.76
SYN3-212ENST00000483062 EYA3Q99504 573 aa10.31□□□□□ -0.76
SYN3-212ENST00000483062 MYOZ2Q9NPC6 264 aa10.31□□□□□ -0.76
SYN3-212ENST00000483062 COLQQ9Y215 455 aaPredicted RBP10.31□□□□□ -0.76
SYN3-212ENST00000483062 TRIOBPQ9H2D6 2365 aa10.3□□□□□ -0.76
SYN3-212ENST00000483062 EN2P19622 333 aaPredicted RBP10.3□□□□□ -0.76
SYN3-212ENST00000483062 SREBF2Q12772 1141 aa10.3□□□□□ -0.76
SYN3-212ENST00000483062 PRAMEF18Q5VWM3 479 aa10.3□□□□□ -0.76
SYN3-212ENST00000483062 OTUD5Q96G74 571 aa10.3□□□□□ -0.76
SYN3-212ENST00000483062 SCAF8Q9UPN6 1271 aaKnown RBP10.3□□□□□ -0.76
SYN3-212ENST00000483062 COL6A3P12111 3177 aa10.3□□□□□ -0.76
SYN3-212ENST00000483062 SCN9AQ15858 1988 aa10.29□□□□□ -0.76
SYN3-212ENST00000483062 USP17L8P0C7I0 530 aa10.29□□□□□ -0.76
SYN3-212ENST00000483062 RPS8P62241 208 aaKnown RBP10.29□□□□□ -0.76
SYN3-212ENST00000483062 CAP1Q01518 475 aa10.29□□□□□ -0.76
SYN3-212ENST00000483062 PTPN12Q05209 780 aaKnown RBP10.29□□□□□ -0.76
SYN3-212ENST00000483062 NFE2L2Q16236 605 aa10.29□□□□□ -0.76
SYN3-212ENST00000483062 SPRYD7Q5W111 196 aa10.29□□□□□ -0.76
SYN3-212ENST00000483062 XAGE3Q8WTP9 111 aa10.29□□□□□ -0.76
SYN3-212ENST00000483062 ISCA1Q9BUE6 129 aa10.29□□□□□ -0.76
SYN3-212ENST00000483062 ZC3H12CQ9C0D7 883 aaKnown RBP10.29□□□□□ -0.76
SYN3-212ENST00000483062 PTPN22Q9Y2R2 807 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms