RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 DDX21Q9NR30 783 aaKnown RBP eCLIP14.58□□□□□ -0.08
CCDC78-213ENST00000482878 TAF5LO75529 589 aa14.57□□□□□ -0.08
CCDC78-213ENST00000482878 SCAND2PQ9GZW5 306 aaPredicted RBP14.57□□□□□ -0.08
CCDC78-213ENST00000482878 ALDH8A1Q9H2A2 487 aaPredicted RBP14.57□□□□□ -0.08
CCDC78-213ENST00000482878 CBX8Q9HC52 389 aa14.57□□□□□ -0.08
CCDC78-213ENST00000482878 JAK2O60674 1132 aa14.57□□□□□ -0.08
CCDC78-213ENST00000482878 DDX58O95786 925 aaKnown RBP14.57□□□□□ -0.08
CCDC78-213ENST00000482878 CHGBP05060 677 aa14.57□□□□□ -0.08
CCDC78-213ENST00000482878 LMO7Q8WWI1 1683 aa14.57□□□□□ -0.08
CCDC78-213ENST00000482878 GOLGA6L4A6NEF3 574 aa14.57□□□□□ -0.08
CCDC78-213ENST00000482878 RIC3Q7Z5B4 369 aa14.57□□□□□ -0.08
CCDC78-213ENST00000482878 NDUFB9Q9Y6M9 179 aa14.57□□□□□ -0.08
CCDC78-213ENST00000482878 ADGRL3Q9HAR2 1447 aa14.57□□□□□ -0.08
CCDC78-213ENST00000482878 COL15A1P39059 1388 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 HNRNPH2P55795 449 aaKnown RBP14.56□□□□□ -0.08
CCDC78-213ENST00000482878 RAPGEF4Q8WZA2 1011 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 GTF3C6Q969F1 213 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 PGBD1Q96JS3 809 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 TRIM5Q9C035 493 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 NR1I2O75469 434 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 GCP02774 474 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 TSGA10IPQ3SY00 556 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 ARHGEF25Q86VW2 580 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 ANKRD24Q8TF21 1146 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 CHMP4CQ96CF2 233 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 NPHP3Q7Z494 1330 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 STRN4Q9NRL3 753 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 PAXBP1Q9Y5B6 917 aa14.56□□□□□ -0.08
CCDC78-213ENST00000482878 JCADQ9P266 1359 aa14.55□□□□□ -0.08
CCDC78-213ENST00000482878 RGPD2P0DJD1 1756 aa14.55□□□□□ -0.08
CCDC78-213ENST00000482878 NCAPD2Q15021 1401 aa14.55□□□□□ -0.08
CCDC78-213ENST00000482878 KMT5BQ4FZB7 885 aa14.55□□□□□ -0.08
CCDC78-213ENST00000482878 DDX11Q96FC9 970 aa14.55□□□□□ -0.08
CCDC78-213ENST00000482878 HMG20BQ9P0W2 317 aa14.55□□□□□ -0.08
CCDC78-213ENST00000482878 NEURL1BA8MQ27 555 aa14.55□□□□□ -0.08
CCDC78-213ENST00000482878 ELF2Q15723 593 aa14.55□□□□□ -0.08
CCDC78-213ENST00000482878 CEP135Q66GS9 1140 aa14.55□□□□□ -0.08
CCDC78-213ENST00000482878 RBM43Q6ZSC3 357 aaKnown RBP14.55□□□□□ -0.08
CCDC78-213ENST00000482878 CLSTN2Q9H4D0 955 aa14.55□□□□□ -0.08
CCDC78-213ENST00000482878 DDX19AQ9NUU7 478 aaKnown RBP14.55□□□□□ -0.08
CCDC78-213ENST00000482878 NRBP1Q9UHY1 535 aa14.55□□□□□ -0.08
CCDC78-213ENST00000482878 SLC20A2Q08357 652 aa14.54□□□□□ -0.08
CCDC78-213ENST00000482878 KRT28Q7Z3Y7 464 aa14.54□□□□□ -0.08
CCDC78-213ENST00000482878 ZNF215Q9UL58 517 aaPredicted RBP14.54□□□□□ -0.08
CCDC78-213ENST00000482878 AXIN2Q9Y2T1 843 aa14.54□□□□□ -0.08
CCDC78-213ENST00000482878 GCKRQ14397 625 aa14.54□□□□□ -0.08
CCDC78-213ENST00000482878 USPL1Q5W0Q7 1092 aa14.54□□□□□ -0.08
CCDC78-213ENST00000482878 CCDC129Q6ZRS4 1044 aa14.54□□□□□ -0.08
CCDC78-213ENST00000482878 DBNLQ9UJU6 430 aaKnown RBP14.54□□□□□ -0.08
CCDC78-213ENST00000482878 SEC62Q99442 399 aaKnown RBP14.54□□□□□ -0.08
CCDC78-213ENST00000482878 POLR3GO15318 223 aaPredicted RBP14.53□□□□□ -0.08
CCDC78-213ENST00000482878 SYCP1Q15431 976 aa14.53□□□□□ -0.08
CCDC78-213ENST00000482878 BICD2Q8TD16 824 aa14.53□□□□□ -0.08
CCDC78-213ENST00000482878 BRF1Q92994 677 aa14.53□□□□□ -0.08
CCDC78-213ENST00000482878 NEK1Q96PY6 1258 aa14.53□□□□□ -0.08
CCDC78-213ENST00000482878 RSPH14Q9UHP6 348 aa14.53□□□□□ -0.08
CCDC78-213ENST00000482878 OVOS2A0A0G2JMS6 1433 aa14.53□□□□□ -0.08
CCDC78-213ENST00000482878 RESTQ13127 1097 aa14.53□□□□□ -0.08
CCDC78-213ENST00000482878 XAGE3Q8WTP9 111 aa14.53□□□□□ -0.08
CCDC78-213ENST00000482878 MYD88Q99836 296 aa14.53□□□□□ -0.08
CCDC78-213ENST00000482878 COPS6Q7L5N1 327 aa14.53□□□□□ -0.08
CCDC78-213ENST00000482878 DNAJC25Q9H1X3 360 aa14.53□□□□□ -0.08
CCDC78-213ENST00000482878 FEZ2Q9UHY8 353 aaPredicted RBP14.53□□□□□ -0.08
CCDC78-213ENST00000482878 TFCP2Q12800 502 aa14.52□□□□□ -0.08
CCDC78-213ENST00000482878 FBXO38Q6PIJ6 1188 aa14.52□□□□□ -0.08
CCDC78-213ENST00000482878 Q6ZUG5 572 aa14.52□□□□□ -0.08
CCDC78-213ENST00000482878 PLA2G4DQ86XP0 818 aa14.52□□□□□ -0.08
CCDC78-213ENST00000482878 ATP5JP18859 108 aa14.52□□□□□ -0.09
CCDC78-213ENST00000482878 ZNF165P49910 485 aa14.52□□□□□ -0.09
CCDC78-213ENST00000482878 ZNF75DP51815 510 aa14.52□□□□□ -0.09
CCDC78-213ENST00000482878 NEXNQ0ZGT2 675 aa14.52□□□□□ -0.09
CCDC78-213ENST00000482878 ZNF790Q6PG37 636 aa14.52□□□□□ -0.09
CCDC78-213ENST00000482878 LRRC2Q9BYS8 371 aa14.52□□□□□ -0.09
CCDC78-213ENST00000482878 CHD2O14647 1828 aaKnown RBP14.52□□□□□ -0.09
CCDC78-213ENST00000482878 RAD51AP2Q09MP3 1159 aa14.51□□□□□ -0.09
CCDC78-213ENST00000482878 TNNI3KQ59H18 835 aa14.51□□□□□ -0.09
CCDC78-213ENST00000482878 TDRD7Q8NHU6 1098 aaKnown RBP14.51□□□□□ -0.09
CCDC78-213ENST00000482878 SECISBP2LQ93073 1101 aaKnown RBP14.51□□□□□ -0.09
CCDC78-213ENST00000482878 FPGT-TNNI3KV9GXZ4 949 aa14.51□□□□□ -0.09
CCDC78-213ENST00000482878 PTCD1O75127 700 aaKnown RBP14.51□□□□□ -0.09
CCDC78-213ENST00000482878 CYP21A2P08686 494 aa14.51□□□□□ -0.09
CCDC78-213ENST00000482878 PTPN12Q05209 780 aaKnown RBP14.51□□□□□ -0.09
CCDC78-213ENST00000482878 KRT32Q14532 448 aa14.51□□□□□ -0.09
CCDC78-213ENST00000482878 NEK11Q8NG66 645 aa14.51□□□□□ -0.09
CCDC78-213ENST00000482878 CCDC85AQ96PX6 553 aaPredicted RBP14.51□□□□□ -0.09
CCDC78-213ENST00000482878 HSP90B1P14625 803 aaKnown RBP14.51□□□□□ -0.09
CCDC78-213ENST00000482878 RFX5P48382 616 aaPredicted RBP14.51□□□□□ -0.09
CCDC78-213ENST00000482878 C10orf67Q8IYJ2 551 aa14.51□□□□□ -0.09
CCDC78-213ENST00000482878 RGS22Q8NE09 1264 aa14.51□□□□□ -0.09
CCDC78-213ENST00000482878 METTL22Q9BUU2 404 aaPredicted RBP14.51□□□□□ -0.09
CCDC78-213ENST00000482878 COPRSQ9NQ92 184 aa14.51□□□□□ -0.09
CCDC78-213ENST00000482878 TRMT1Q9NXH9 659 aaKnown RBP14.51□□□□□ -0.09
CCDC78-213ENST00000482878 TULP2O00295 520 aa14.5□□□□□ -0.09
CCDC78-213ENST00000482878 CEBPZQ03701 1054 aaKnown RBP14.5□□□□□ -0.09
CCDC78-213ENST00000482878 TEX35Q5T0J7 233 aa14.5□□□□□ -0.09
CCDC78-213ENST00000482878 SYTL4Q96C24 671 aaPredicted RBP14.5□□□□□ -0.09
CCDC78-213ENST00000482878 ZNF609O15014 1411 aa14.5□□□□□ -0.09
CCDC78-213ENST00000482878 MRC1P22897 1456 aa14.5□□□□□ -0.09
CCDC78-213ENST00000482878 H3BQV1 296 aa14.5□□□□□ -0.09
CCDC78-213ENST00000482878 SCRN1Q12765 414 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms