RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 MCM4P33991 863 aa19■□□□□ 0.63
RXRA-202ENST00000481739 NUCB2P80303 420 aa19■□□□□ 0.63
RXRA-202ENST00000481739 ZNF827Q17R98 1081 aa19■□□□□ 0.63
RXRA-202ENST00000481739 TAF7LQ5H9L4 462 aa19■□□□□ 0.63
RXRA-202ENST00000481739 GBP4Q96PP9 640 aa19■□□□□ 0.63
RXRA-202ENST00000481739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19■□□□□ 0.63
RXRA-202ENST00000481739 EZH2Q15910 746 aaKnown RBP19■□□□□ 0.63
RXRA-202ENST00000481739 ATG9AQ7Z3C6 839 aa19■□□□□ 0.63
RXRA-202ENST00000481739 TTLL11Q8NHH1 800 aa19■□□□□ 0.63
RXRA-202ENST00000481739 ZNF594Q96JF6 807 aaPredicted RBP19■□□□□ 0.63
RXRA-202ENST00000481739 IL25Q9H293 177 aa19■□□□□ 0.63
RXRA-202ENST00000481739 BOLA2Q9H3K6 86 aa19■□□□□ 0.63
RXRA-202ENST00000481739 RGPD3A6NKT7 1758 aaPredicted RBP18.99■□□□□ 0.63
RXRA-202ENST00000481739 RGPD4Q7Z3J3 1758 aa18.99■□□□□ 0.63
RXRA-202ENST00000481739 IFIT5Q13325 482 aaKnown RBP18.99■□□□□ 0.63
RXRA-202ENST00000481739 NBPF5PQ86XG9 351 aaPredicted RBP18.99■□□□□ 0.63
RXRA-202ENST00000481739 AKT1S1Q96B36 256 aa18.99■□□□□ 0.63
RXRA-202ENST00000481739 FSD1Q9BTV5 496 aa18.99■□□□□ 0.63
RXRA-202ENST00000481739 NYXQ9GZU5 481 aa18.99■□□□□ 0.63
RXRA-202ENST00000481739 PALD1Q9ULE6 856 aa18.99■□□□□ 0.63
RXRA-202ENST00000481739 NPHP1O15259 732 aa18.98■□□□□ 0.63
RXRA-202ENST00000481739 GSE1Q14687 1217 aa18.98■□□□□ 0.63
RXRA-202ENST00000481739 ERFEQ4G0M1 354 aa18.98■□□□□ 0.63
RXRA-202ENST00000481739 CLEC17AQ6ZS10 378 aa18.97■□□□□ 0.63
RXRA-202ENST00000481739 KCNB2Q92953 911 aa18.97■□□□□ 0.63
RXRA-202ENST00000481739 INTS4Q96HW7 963 aaKnown RBP18.97■□□□□ 0.63
RXRA-202ENST00000481739 HAUS7Q99871 368 aa18.97■□□□□ 0.63
RXRA-202ENST00000481739 GREM2Q9H772 168 aa18.97■□□□□ 0.63
RXRA-202ENST00000481739 AKAP2Q9Y2D5 859 aa18.97■□□□□ 0.63
RXRA-202ENST00000481739 ZNF609O15014 1411 aa18.97■□□□□ 0.63
RXRA-202ENST00000481739 CCDC171Q6TFL3 1326 aa18.97■□□□□ 0.63
RXRA-202ENST00000481739 ITGA6P23229 1130 aa18.97■□□□□ 0.63
RXRA-202ENST00000481739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.97■□□□□ 0.63
RXRA-202ENST00000481739 CAMKK2Q96RR4 588 aa18.97■□□□□ 0.63
RXRA-202ENST00000481739 ANKRD18BA2A2Z9 1011 aa18.96■□□□□ 0.63
RXRA-202ENST00000481739 GYS1P13807 737 aa18.96■□□□□ 0.63
RXRA-202ENST00000481739 BAG6P46379 1132 aa18.96■□□□□ 0.63
RXRA-202ENST00000481739 TPTE2Q6XPS3 522 aa18.96■□□□□ 0.63
RXRA-202ENST00000481739 DBNDD2Q9BQY9 259 aa18.96■□□□□ 0.63
RXRA-202ENST00000481739 TM6SF1Q9BZW5 370 aa18.96■□□□□ 0.63
RXRA-202ENST00000481739 CEP126Q9P2H0 1117 aa18.96■□□□□ 0.63
RXRA-202ENST00000481739 DDX60Q8IY21 1712 aaKnown RBP18.96■□□□□ 0.63
RXRA-202ENST00000481739 MED23Q9ULK4 1368 aa18.96■□□□□ 0.62
RXRA-202ENST00000481739 CUL4AQ13619 759 aa18.95■□□□□ 0.62
RXRA-202ENST00000481739 NFIXQ14938 502 aa18.95■□□□□ 0.62
RXRA-202ENST00000481739 TNPO1Q92973 898 aaKnown RBP18.95■□□□□ 0.62
RXRA-202ENST00000481739 SNX14Q9Y5W7 946 aa18.95■□□□□ 0.62
RXRA-202ENST00000481739 ZKSCAN1P17029 563 aaPredicted RBP18.95■□□□□ 0.62
RXRA-202ENST00000481739 NMIQ13287 307 aaPredicted RBP18.95■□□□□ 0.62
RXRA-202ENST00000481739 CCDC152Q4G0S7 254 aa18.95■□□□□ 0.62
RXRA-202ENST00000481739 FLAD1Q8NFF5 587 aa18.95■□□□□ 0.62
RXRA-202ENST00000481739 TMX3Q96JJ7 454 aa18.95■□□□□ 0.62
RXRA-202ENST00000481739 LAMB2P55268 1798 aa18.94■□□□□ 0.62
RXRA-202ENST00000481739 CARMIL3Q8ND23 1372 aa18.94■□□□□ 0.62
RXRA-202ENST00000481739 COL24A1Q17RW2 1714 aa18.94■□□□□ 0.62
RXRA-202ENST00000481739 LRRC24Q50LG9 513 aa18.94■□□□□ 0.62
RXRA-202ENST00000481739 RNF20Q5VTR2 975 aa18.94■□□□□ 0.62
RXRA-202ENST00000481739 MAP4K1Q92918 833 aa18.94■□□□□ 0.62
RXRA-202ENST00000481739 PUS3Q9BZE2 481 aaKnown RBP18.94■□□□□ 0.62
RXRA-202ENST00000481739 SPEF2Q9C093 1822 aa18.94■□□□□ 0.62
RXRA-202ENST00000481739 DEFB132Q7Z7B7 95 aa18.93■□□□□ 0.62
RXRA-202ENST00000481739 COL23A1Q86Y22 540 aaPredicted RBP18.93■□□□□ 0.62
RXRA-202ENST00000481739 CCDC24Q8N4L8 307 aa18.93■□□□□ 0.62
RXRA-202ENST00000481739 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
RXRA-202ENST00000481739 STK32BQ9NY57 414 aa18.93■□□□□ 0.62
RXRA-202ENST00000481739 HMG20BQ9P0W2 317 aa18.93■□□□□ 0.62
RXRA-202ENST00000481739 GOLGA6L22H0YM25 854 aa18.92■□□□□ 0.62
RXRA-202ENST00000481739 NECTIN1Q15223 517 aa18.92■□□□□ 0.62
RXRA-202ENST00000481739 LRRFIP1Q32MZ4 808 aaKnown RBP18.92■□□□□ 0.62
RXRA-202ENST00000481739 LDHAL6AQ6ZMR3 332 aa18.92■□□□□ 0.62
RXRA-202ENST00000481739 KBTBD3Q8NAB2 608 aa18.92■□□□□ 0.62
RXRA-202ENST00000481739 FAM227BQ96M60 508 aa18.91■□□□□ 0.62
RXRA-202ENST00000481739 NEUROD6Q96NK8 337 aa18.91■□□□□ 0.62
RXRA-202ENST00000481739 CNNM1Q9NRU3 951 aa18.91■□□□□ 0.62
RXRA-202ENST00000481739 FOXD4L1Q9NU39 408 aa18.91■□□□□ 0.62
RXRA-202ENST00000481739 A0A1B0GUL7 405 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 CYP2E1P05181 493 aaPredicted RBP18.9■□□□□ 0.62
RXRA-202ENST00000481739 PSMA5P28066 241 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 SLC10A5Q5PT55 438 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 CNBD1Q8NA66 436 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 NLRP3Q96P20 1036 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 SEC31BQ9NQW1 1179 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 A0A0D9SFI3 127 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 KCNJ4P48050 445 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 PTH1RQ03431 593 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 SLC15A2Q16348 729 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 C3orf67Q6ZVT6 689 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 TTC14Q96N46 770 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 UPF3BQ9BZI7 483 aaKnown RBP18.9■□□□□ 0.62
RXRA-202ENST00000481739 RBM8AQ9Y5S9 174 aaKnown RBP18.9■□□□□ 0.62
RXRA-202ENST00000481739 PNPLA7Q6ZV29 1317 aa18.9■□□□□ 0.62
RXRA-202ENST00000481739 SKOR2Q2VWA4 1001 aaPredicted RBP18.89■□□□□ 0.61
RXRA-202ENST00000481739 CCDC158Q5M9N0 1113 aa18.89■□□□□ 0.61
RXRA-202ENST00000481739 DNAJC2Q99543 621 aaKnown RBP18.89■□□□□ 0.61
RXRA-202ENST00000481739 ANO8Q9HCE9 1232 aaPredicted RBP18.89■□□□□ 0.61
RXRA-202ENST00000481739 PAG1Q9NWQ8 432 aa18.89■□□□□ 0.61
RXRA-202ENST00000481739 SERPINB2P05120 415 aa18.88■□□□□ 0.61
RXRA-202ENST00000481739 TM4SF1P30408 202 aa18.88■□□□□ 0.61
RXRA-202ENST00000481739 TSGA10IPQ3SY00 556 aa18.88■□□□□ 0.61
RXRA-202ENST00000481739 VPS53Q5VIR6 699 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms