RNA–Protein interactions for RNA: ENST00000480623.6

EFHC1-202, Transcript of EF-hand domain containing 1, humanhuman

TSL 5

Gene EFHC1, Length 2,549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-202ENST00000480623 BCL2L12Q9HB09 334 aa17.68■□□□□ 0.42
EFHC1-202ENST00000480623 LRRC4BQ9NT99 713 aa17.68■□□□□ 0.42
EFHC1-202ENST00000480623 ARHGEF1Q92888 912 aaKnown RBP17.67■□□□□ 0.42
EFHC1-202ENST00000480623 AK7Q96M32 723 aa17.67■□□□□ 0.42
EFHC1-202ENST00000480623 MPHOSPH8Q99549 860 aa17.67■□□□□ 0.42
EFHC1-202ENST00000480623 BCL11BQ9C0K0 894 aaPredicted RBP17.67■□□□□ 0.42
EFHC1-202ENST00000480623 PAG1Q9NWQ8 432 aa17.67■□□□□ 0.42
EFHC1-202ENST00000480623 BCORQ6W2J9 1755 aa17.67■□□□□ 0.42
EFHC1-202ENST00000480623 SNAP23O00161 211 aa17.67■□□□□ 0.42
EFHC1-202ENST00000480623 HIP1O00291 1037 aa17.67■□□□□ 0.42
EFHC1-202ENST00000480623 NFKBIBQ15653 356 aa17.67■□□□□ 0.42
EFHC1-202ENST00000480623 CCDC158Q5M9N0 1113 aa17.67■□□□□ 0.42
EFHC1-202ENST00000480623 CLEC4GQ6UXB4 293 aa17.67■□□□□ 0.42
EFHC1-202ENST00000480623 ZNF831Q5JPB2 1677 aa17.67■□□□□ 0.42
EFHC1-202ENST00000480623 TAF5LO75529 589 aa17.66■□□□□ 0.42
EFHC1-202ENST00000480623 HSPA4P34932 840 aa17.66■□□□□ 0.42
EFHC1-202ENST00000480623 C3orf67Q6ZVT6 689 aa17.66■□□□□ 0.42
EFHC1-202ENST00000480623 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
EFHC1-202ENST00000480623 SEC62Q99442 399 aaKnown RBP17.66■□□□□ 0.42
EFHC1-202ENST00000480623 NARFQ9UHQ1 456 aa17.66■□□□□ 0.42
EFHC1-202ENST00000480623 SPEF2Q9C093 1822 aa17.66■□□□□ 0.42
EFHC1-202ENST00000480623 NPHP1O15259 732 aa17.66■□□□□ 0.42
EFHC1-202ENST00000480623 CCDC152Q4G0S7 254 aa17.66■□□□□ 0.42
EFHC1-202ENST00000480623 RC3H1Q5TC82 1133 aaKnown RBP17.66■□□□□ 0.42
EFHC1-202ENST00000480623 PRPF40BQ6NWY9 871 aaKnown RBP17.66■□□□□ 0.42
EFHC1-202ENST00000480623 PI16Q6UXB8 463 aa17.66■□□□□ 0.42
EFHC1-202ENST00000480623 CCDC129Q6ZRS4 1044 aa17.66■□□□□ 0.42
EFHC1-202ENST00000480623 FBXO3Q9UK99 471 aa17.66■□□□□ 0.42
EFHC1-202ENST00000480623 DDX60Q8IY21 1712 aaKnown RBP17.66■□□□□ 0.42
EFHC1-202ENST00000480623 RASEFQ8IZ41 740 aa17.65■□□□□ 0.42
EFHC1-202ENST00000480623 TAF1LQ8IZX4 1826 aa17.65■□□□□ 0.42
EFHC1-202ENST00000480623 RFC4P35249 363 aa17.65■□□□□ 0.42
EFHC1-202ENST00000480623 SCARF1Q14162 830 aa17.65■□□□□ 0.42
EFHC1-202ENST00000480623 SETDB2Q96T68 719 aa17.65■□□□□ 0.42
EFHC1-202ENST00000480623 FRAT2O75474 233 aaPredicted RBP17.64■□□□□ 0.41
EFHC1-202ENST00000480623 NBPF5PQ86XG9 351 aaPredicted RBP17.64■□□□□ 0.41
EFHC1-202ENST00000480623 SNX14Q9Y5W7 946 aa17.64■□□□□ 0.41
EFHC1-202ENST00000480623 CCDC171Q6TFL3 1326 aa17.64■□□□□ 0.41
EFHC1-202ENST00000480623 LY75O60449 1722 aa17.64■□□□□ 0.41
EFHC1-202ENST00000480623 TAF1P21675 1872 aa17.64■□□□□ 0.41
EFHC1-202ENST00000480623 PDE8BO95263 885 aa17.63■□□□□ 0.41
EFHC1-202ENST00000480623 TRAPPC3LQ5T215 181 aa17.63■□□□□ 0.41
EFHC1-202ENST00000480623 KBTBD3Q8NAB2 608 aa17.63■□□□□ 0.41
EFHC1-202ENST00000480623 CPA1P15085 419 aa17.63■□□□□ 0.41
EFHC1-202ENST00000480623 IGHMBP2P38935 993 aaKnown RBP17.63■□□□□ 0.41
EFHC1-202ENST00000480623 RBM8AQ9Y5S9 174 aaKnown RBP17.63■□□□□ 0.41
EFHC1-202ENST00000480623 C4BP0C0L5 1744 aa17.62■□□□□ 0.41
EFHC1-202ENST00000480623 ANAPC15P60006 121 aa17.62■□□□□ 0.41
EFHC1-202ENST00000480623 VGLL2Q8N8G2 317 aa17.62■□□□□ 0.41
EFHC1-202ENST00000480623 LARP6Q9BRS8 491 aaKnown RBP17.62■□□□□ 0.41
EFHC1-202ENST00000480623 ABCC12Q96J65 1359 aa17.61■□□□□ 0.41
EFHC1-202ENST00000480623 ZAP70P43403 619 aa17.61■□□□□ 0.41
EFHC1-202ENST00000480623 SCN7AQ01118 1682 aa17.61■□□□□ 0.41
EFHC1-202ENST00000480623 HSP90B1P14625 803 aaKnown RBP17.61■□□□□ 0.41
EFHC1-202ENST00000480623 CHMP5Q9NZZ3 219 aa17.61■□□□□ 0.41
EFHC1-202ENST00000480623 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.6■□□□□ 0.41
EFHC1-202ENST00000480623 COL4A1P02462 1669 aa17.6■□□□□ 0.41
EFHC1-202ENST00000480623 MROH5Q6ZUA9 1318 aa17.6■□□□□ 0.41
EFHC1-202ENST00000480623 CASTP20810 708 aaKnown RBP17.6■□□□□ 0.41
EFHC1-202ENST00000480623 PHKA1P46020 1223 aa17.6■□□□□ 0.41
EFHC1-202ENST00000480623 PUM3Q15397 648 aaKnown RBP17.6■□□□□ 0.41
EFHC1-202ENST00000480623 ADCK5Q3MIX3 580 aa17.6■□□□□ 0.41
EFHC1-202ENST00000480623 MED23Q9ULK4 1368 aa17.6■□□□□ 0.41
EFHC1-202ENST00000480623 MCAMP43121 646 aa17.59■□□□□ 0.41
EFHC1-202ENST00000480623 RBM6P78332 1123 aaKnown RBP17.59■□□□□ 0.41
EFHC1-202ENST00000480623 JAKMIP1Q96N16 626 aaKnown RBP17.59■□□□□ 0.41
EFHC1-202ENST00000480623 MCMDC2Q4G0Z9 681 aa17.59■□□□□ 0.41
EFHC1-202ENST00000480623 CREB3L3Q68CJ9 461 aa17.59■□□□□ 0.41
EFHC1-202ENST00000480623 ZNF772Q68DY9 489 aaPredicted RBP17.59■□□□□ 0.41
EFHC1-202ENST00000480623 MAP4K1Q92918 833 aa17.58■□□□□ 0.41
EFHC1-202ENST00000480623 EPB41L2O43491 1005 aaKnown RBP17.58■□□□□ 0.4
EFHC1-202ENST00000480623 CHRNDQ07001 517 aa17.58■□□□□ 0.4
EFHC1-202ENST00000480623 WASHC4Q2M389 1173 aa17.58■□□□□ 0.4
EFHC1-202ENST00000480623 CCDC102BQ68D86 513 aa17.58■□□□□ 0.4
EFHC1-202ENST00000480623 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.4
EFHC1-202ENST00000480623 ZGPATQ8N5A5 531 aaKnown RBP17.58■□□□□ 0.4
EFHC1-202ENST00000480623 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.4
EFHC1-202ENST00000480623 TAF6LQ9Y6J9 622 aa17.58■□□□□ 0.4
EFHC1-202ENST00000480623 C4AP0C0L4 1744 aa17.58■□□□□ 0.4
EFHC1-202ENST00000480623 LAMB2P55268 1798 aa17.57■□□□□ 0.4
EFHC1-202ENST00000480623 WTIPA6NIX2 430 aaPredicted RBP17.57■□□□□ 0.4
EFHC1-202ENST00000480623 ZKSCAN1P17029 563 aaPredicted RBP17.57■□□□□ 0.4
EFHC1-202ENST00000480623 NECTIN1Q15223 517 aa17.57■□□□□ 0.4
EFHC1-202ENST00000480623 TPTE2Q6XPS3 522 aa17.57■□□□□ 0.4
EFHC1-202ENST00000480623 LPIN2Q92539 896 aa17.57■□□□□ 0.4
EFHC1-202ENST00000480623 NYXQ9GZU5 481 aa17.57■□□□□ 0.4
EFHC1-202ENST00000480623 CASZ1Q86V15 1759 aa17.57■□□□□ 0.4
EFHC1-202ENST00000480623 SLC5A1P13866 664 aa17.57■□□□□ 0.4
EFHC1-202ENST00000480623 CELF1Q92879 486 aaKnown RBP17.57■□□□□ 0.4
EFHC1-202ENST00000480623 TMX3Q96JJ7 454 aa17.57■□□□□ 0.4
EFHC1-202ENST00000480623 SLC27A2O14975 620 aa17.56■□□□□ 0.4
EFHC1-202ENST00000480623 VPS53Q5VIR6 699 aa17.56■□□□□ 0.4
EFHC1-202ENST00000480623 NLRP3Q96P20 1036 aa17.56■□□□□ 0.4
EFHC1-202ENST00000480623 IQSEC3Q9UPP2 1182 aaPredicted RBP17.56■□□□□ 0.4
EFHC1-202ENST00000480623 RNF113AO15541 343 aaKnown RBP17.56■□□□□ 0.4
EFHC1-202ENST00000480623 NFIXQ14938 502 aa17.56■□□□□ 0.4
EFHC1-202ENST00000480623 PKNOX2Q96KN3 472 aa17.56■□□□□ 0.4
EFHC1-202ENST00000480623 COL9A3Q14050 684 aaPredicted RBP17.55■□□□□ 0.4
EFHC1-202ENST00000480623 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.55■□□□□ 0.4
EFHC1-202ENST00000480623 LRP5O75197 1615 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms