RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 SLC5A1P13866 664 aa13.66□□□□□ -0.22
RAPGEF3-209ENST00000479866 HAND2P61296 217 aa13.66□□□□□ -0.22
RAPGEF3-209ENST00000479866 ADORA1P30542 326 aa13.65□□□□□ -0.22
RAPGEF3-209ENST00000479866 RRP12Q5JTH9 1297 aaKnown RBP13.65□□□□□ -0.22
RAPGEF3-209ENST00000479866 RPGRQ92834 1020 aaKnown RBP13.65□□□□□ -0.22
RAPGEF3-209ENST00000479866 PAG1Q9NWQ8 432 aa13.65□□□□□ -0.22
RAPGEF3-209ENST00000479866 PARP10Q53GL7 1025 aa13.65□□□□□ -0.22
RAPGEF3-209ENST00000479866 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
RAPGEF3-209ENST00000479866 ROBO1Q9Y6N7 1651 aa13.65□□□□□ -0.22
RAPGEF3-209ENST00000479866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.65□□□□□ -0.22
RAPGEF3-209ENST00000479866 PPFIA3O75145 1194 aa13.65□□□□□ -0.22
RAPGEF3-209ENST00000479866 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.64□□□□□ -0.23
RAPGEF3-209ENST00000479866 CHMP4CQ96CF2 233 aa13.64□□□□□ -0.23
RAPGEF3-209ENST00000479866 SEC62Q99442 399 aaKnown RBP13.64□□□□□ -0.23
RAPGEF3-209ENST00000479866 ISY1Q9ULR0 285 aaKnown RBP13.64□□□□□ -0.23
RAPGEF3-209ENST00000479866 ERFEQ4G0M1 354 aa13.64□□□□□ -0.23
RAPGEF3-209ENST00000479866 PI16Q6UXB8 463 aa13.64□□□□□ -0.23
RAPGEF3-209ENST00000479866 LINC00116Q8NCU8 138 aa13.64□□□□□ -0.23
RAPGEF3-209ENST00000479866 ISCA1Q9BUE6 129 aa13.64□□□□□ -0.23
RAPGEF3-209ENST00000479866 CYP46A1Q9Y6A2 500 aa13.64□□□□□ -0.23
RAPGEF3-209ENST00000479866 SLFNL1Q499Z3 407 aa13.63□□□□□ -0.23
RAPGEF3-209ENST00000479866 TTLL11Q8NHH1 800 aa13.63□□□□□ -0.23
RAPGEF3-209ENST00000479866 GBP4Q96PP9 640 aa13.63□□□□□ -0.23
RAPGEF3-209ENST00000479866 GNL3LQ9NVN8 582 aaKnown RBP13.63□□□□□ -0.23
RAPGEF3-209ENST00000479866 MTX1Q13505 466 aa13.63□□□□□ -0.23
RAPGEF3-209ENST00000479866 BLOC1S2Q6QNY1 142 aa13.63□□□□□ -0.23
RAPGEF3-209ENST00000479866 RALYLQ86SE5 291 aaKnown RBP13.63□□□□□ -0.23
RAPGEF3-209ENST00000479866 CNBD1Q8NA66 436 aa13.63□□□□□ -0.23
RAPGEF3-209ENST00000479866 LRRC2Q9BYS8 371 aa13.63□□□□□ -0.23
RAPGEF3-209ENST00000479866 RBM8AQ9Y5S9 174 aaKnown RBP13.63□□□□□ -0.23
RAPGEF3-209ENST00000479866 VPS37CA5D8V6 355 aaPredicted RBP13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 EIF5P55010 431 aaKnown RBP13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 FOXO4P98177 505 aa13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 TRDNQ13061 729 aa13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 SLC4A8Q2Y0W8 1093 aa13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 CAVIN4Q5BKX8 364 aa13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 MAP7D2Q96T17 732 aa13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 C6orf229H3BNL8 230 aa13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 RXRBP28702 533 aa13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 NSFL1CQ9UNZ2 370 aaKnown RBP13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 PI4K2BQ8TCG2 481 aa13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 AIDAQ96BJ3 306 aa13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 PALD1Q9ULE6 856 aa13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.62□□□□□ -0.23
RAPGEF3-209ENST00000479866 ZAP70P43403 619 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 SLC9C2Q5TAH2 1124 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 PDRG1Q9NUG6 133 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 SMC3Q9UQE7 1217 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 TNNT1P13805 278 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 MSNP26038 577 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 ZNF622Q969S3 477 aaKnown RBP eCLIP13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 STAP2Q9UGK3 403 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 KCNG1Q9UIX4 513 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 MTMR7Q9Y216 660 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 BCL9O00512 1426 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 GOLGA6L3A6NEY3 463 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 CHGBP05060 677 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 INTS5Q6P9B9 1019 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 OSBPL3Q9H4L5 887 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 ANTXR1Q9H6X2 564 aa13.61□□□□□ -0.23
RAPGEF3-209ENST00000479866 A0A0D9SFI3 127 aa13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 ERVV-1B6SEH8 477 aa13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 SGSM2O43147 1006 aa13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 PSMA5P28066 241 aa13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 TBC1D9BQ66K14 1250 aa13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 ARHGEF1Q92888 912 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 RGPD1P0DJD0 1748 aa13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 TRPM3Q9HCF6 1732 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 COL15A1P39059 1388 aa13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 NYXQ9GZU5 481 aa13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 ZBTB22O15209 634 aa13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 FNBP4Q8N3X1 1017 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF3-209ENST00000479866 PTH1RQ03431 593 aa13.59□□□□□ -0.23
RAPGEF3-209ENST00000479866 ZNF772Q68DY9 489 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-209ENST00000479866 RAB11FIP4Q86YS3 637 aa13.59□□□□□ -0.23
RAPGEF3-209ENST00000479866 CCDC83Q8IWF9 413 aa13.59□□□□□ -0.23
RAPGEF3-209ENST00000479866 FAM184AQ8NB25 1140 aa13.59□□□□□ -0.23
RAPGEF3-209ENST00000479866 RBM25P49756 843 aaKnown RBP13.59□□□□□ -0.23
RAPGEF3-209ENST00000479866 CHST3Q7LGC8 479 aa13.59□□□□□ -0.23
RAPGEF3-209ENST00000479866 MIGA1Q8NAN2 632 aa13.59□□□□□ -0.23
RAPGEF3-209ENST00000479866 CD2BP2O95400 341 aaKnown RBP13.58□□□□□ -0.23
RAPGEF3-209ENST00000479866 TDO2P48775 406 aa13.58□□□□□ -0.23
RAPGEF3-209ENST00000479866 ST5P78524 1137 aa13.58□□□□□ -0.23
RAPGEF3-209ENST00000479866 MAP3K12Q12852 859 aa13.58□□□□□ -0.23
RAPGEF3-209ENST00000479866 NFXL1Q6ZNB6 911 aa13.58□□□□□ -0.23
RAPGEF3-209ENST00000479866 ALS2Q96Q42 1657 aa13.58□□□□□ -0.23
RAPGEF3-209ENST00000479866 FBXO3Q9UK99 471 aa13.58□□□□□ -0.23
RAPGEF3-209ENST00000479866 MINDY4BA8MYZ0 360 aa13.58□□□□□ -0.24
RAPGEF3-209ENST00000479866 RPS6KA4O75676 772 aa13.58□□□□□ -0.24
RAPGEF3-209ENST00000479866 ATP5JP18859 108 aa13.58□□□□□ -0.24
RAPGEF3-209ENST00000479866 PHKA1P46020 1223 aa13.58□□□□□ -0.24
RAPGEF3-209ENST00000479866 MCMDC2Q4G0Z9 681 aa13.58□□□□□ -0.24
RAPGEF3-209ENST00000479866 MCTP1Q6DN14 999 aa13.58□□□□□ -0.24
RAPGEF3-209ENST00000479866 R3HCC1Q9Y3T6 440 aaKnown RBP13.58□□□□□ -0.24
RAPGEF3-209ENST00000479866 TNS2Q63HR2 1409 aa13.58□□□□□ -0.24
RAPGEF3-209ENST00000479866 GYG1P46976 350 aa13.58□□□□□ -0.24
RAPGEF3-209ENST00000479866 BCAMP50895 628 aa13.58□□□□□ -0.24
RAPGEF3-209ENST00000479866 UBN2Q6ZU65 1347 aa13.58□□□□□ -0.24
RAPGEF3-209ENST00000479866 CAMTA2O94983 1202 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms