RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 PLPPR3Q6T4P5 718 aa24.23■■□□□ 1.47
COL13A1-208ENST00000479733 NCOA5Q9HCD5 579 aaKnown RBP24.23■■□□□ 1.47
COL13A1-208ENST00000479733 TMEM51Q9NW97 253 aa24.23■■□□□ 1.47
COL13A1-208ENST00000479733 MED23Q9ULK4 1368 aa24.23■■□□□ 1.47
COL13A1-208ENST00000479733 GTF2E1P29083 439 aaPredicted RBP24.23■■□□□ 1.47
COL13A1-208ENST00000479733 TRERF1Q96PN7 1200 aa24.23■■□□□ 1.47
COL13A1-208ENST00000479733 CTAGE5O15320 804 aa24.22■■□□□ 1.47
COL13A1-208ENST00000479733 CYP21A2P08686 494 aa24.22■■□□□ 1.47
COL13A1-208ENST00000479733 ALDH8A1Q9H2A2 487 aaPredicted RBP24.22■■□□□ 1.47
COL13A1-208ENST00000479733 AMOTL2Q9Y2J4 779 aa24.22■■□□□ 1.47
COL13A1-208ENST00000479733 FMN2Q9NZ56 1722 aa24.22■■□□□ 1.47
COL13A1-208ENST00000479733 CRYBG1Q9Y4K1 1723 aa24.22■■□□□ 1.47
COL13A1-208ENST00000479733 ADGRL3Q9HAR2 1447 aa24.22■■□□□ 1.47
COL13A1-208ENST00000479733 COL15A1P39059 1388 aa24.22■■□□□ 1.47
COL13A1-208ENST00000479733 BIN1O00499 593 aa24.22■■□□□ 1.47
COL13A1-208ENST00000479733 NBPF6Q5VWK0 638 aa24.22■■□□□ 1.47
COL13A1-208ENST00000479733 TMC6Q7Z403 805 aa24.22■■□□□ 1.47
COL13A1-208ENST00000479733 NBPF4Q96M43 638 aa24.22■■□□□ 1.47
COL13A1-208ENST00000479733 RCOR1Q9UKL0 485 aa24.22■■□□□ 1.47
COL13A1-208ENST00000479733 A0A1B0GVL5 298 aa24.21■■□□□ 1.47
COL13A1-208ENST00000479733 ALDH1L1O75891 902 aa24.21■■□□□ 1.47
COL13A1-208ENST00000479733 APOBRQ0VD83 1088 aa24.21■■□□□ 1.47
COL13A1-208ENST00000479733 MAPK8IP2Q13387 824 aaPredicted RBP24.21■■□□□ 1.47
COL13A1-208ENST00000479733 E4F1Q66K89 784 aaPredicted RBP24.21■■□□□ 1.47
COL13A1-208ENST00000479733 NBPF11Q86T75 865 aa24.21■■□□□ 1.47
COL13A1-208ENST00000479733 CCDC66A2RUB6 948 aa24.21■■□□□ 1.47
COL13A1-208ENST00000479733 VGLL3A8MV65 326 aa24.21■■□□□ 1.47
COL13A1-208ENST00000479733 LRRC37A3O60309 1634 aa24.21■■□□□ 1.47
COL13A1-208ENST00000479733 KRT32Q14532 448 aa24.21■■□□□ 1.47
COL13A1-208ENST00000479733 SLFNL1Q499Z3 407 aa24.21■■□□□ 1.47
COL13A1-208ENST00000479733 ZNF530Q6P9A1 599 aaPredicted RBP24.21■■□□□ 1.47
COL13A1-208ENST00000479733 SNRKQ9NRH2 765 aa24.21■■□□□ 1.47
COL13A1-208ENST00000479733 FAM160A1Q05DH4 1040 aa24.2■■□□□ 1.46
COL13A1-208ENST00000479733 PTPDC1A2A3K4 754 aa24.2■■□□□ 1.46
COL13A1-208ENST00000479733 CHST3Q7LGC8 479 aa24.2■■□□□ 1.46
COL13A1-208ENST00000479733 XPO4Q9C0E2 1151 aaKnown RBP24.2■■□□□ 1.46
COL13A1-208ENST00000479733 IFNKQ9P0W0 207 aa24.2■■□□□ 1.46
COL13A1-208ENST00000479733 ZRSR1Q15695 479 aaKnown RBP24.19■■□□□ 1.46
COL13A1-208ENST00000479733 HOMER1Q86YM7 354 aa24.19■■□□□ 1.46
COL13A1-208ENST00000479733 PPP1R13BQ96KQ4 1090 aa24.19■■□□□ 1.46
COL13A1-208ENST00000479733 TSGA10IPQ3SY00 556 aa24.19■■□□□ 1.46
COL13A1-208ENST00000479733 ISM2Q6H9L7 571 aa24.19■■□□□ 1.46
COL13A1-208ENST00000479733 NSUN7Q8NE18 718 aaKnown RBP24.19■■□□□ 1.46
COL13A1-208ENST00000479733 NOL10Q9BSC4 688 aaKnown RBP24.19■■□□□ 1.46
COL13A1-208ENST00000479733 TAOK2Q9UL54 1235 aa24.19■■□□□ 1.46
COL13A1-208ENST00000479733 TMEM2Q9UHN6 1383 aa24.19■■□□□ 1.46
COL13A1-208ENST00000479733 DPCR1Q3MIW9 517 aa24.18■■□□□ 1.46
COL13A1-208ENST00000479733 ENGASEQ8NFI3 743 aa24.18■■□□□ 1.46
COL13A1-208ENST00000479733 CEMIPQ8WUJ3 1361 aa24.18■■□□□ 1.46
COL13A1-208ENST00000479733 ADAMTS13Q76LX8 1427 aa24.18■■□□□ 1.46
COL13A1-208ENST00000479733 HOXB7P09629 217 aa24.18■■□□□ 1.46
COL13A1-208ENST00000479733 ARHGAP29Q52LW3 1261 aa24.18■■□□□ 1.46
COL13A1-208ENST00000479733 DDX46Q7L014 1031 aaKnown RBP24.18■■□□□ 1.46
COL13A1-208ENST00000479733 LRRC59Q96AG4 307 aaKnown RBP24.18■■□□□ 1.46
COL13A1-208ENST00000479733 CTDNEP1O95476 244 aa24.17■■□□□ 1.46
COL13A1-208ENST00000479733 ARMCX5Q6P1M9 558 aa24.17■■□□□ 1.46
COL13A1-208ENST00000479733 STOX1Q6ZVD7 989 aa24.17■■□□□ 1.46
COL13A1-208ENST00000479733 NAT10Q9H0A0 1025 aaKnown RBP24.17■■□□□ 1.46
COL13A1-208ENST00000479733 GSDMDP57764 484 aa24.17■■□□□ 1.46
COL13A1-208ENST00000479733 FAM53CQ9NYF3 392 aa24.17■■□□□ 1.46
COL13A1-208ENST00000479733 CLCN6P51797 869 aa24.17■■□□□ 1.46
COL13A1-208ENST00000479733 OTUD7BQ6GQQ9 843 aa24.17■■□□□ 1.46
COL13A1-208ENST00000479733 LINS1Q8NG48 757 aa24.17■■□□□ 1.46
COL13A1-208ENST00000479733 SETD1BQ9UPS6 1966 aaKnown RBP24.16■■□□□ 1.46
COL13A1-208ENST00000479733 CDK11BP21127 795 aaKnown RBP24.16■■□□□ 1.46
COL13A1-208ENST00000479733 IRX5P78411 483 aaPredicted RBP24.16■■□□□ 1.46
COL13A1-208ENST00000479733 BMS1Q14692 1282 aaKnown RBP24.16■■□□□ 1.46
COL13A1-208ENST00000479733 USPL1Q5W0Q7 1092 aa24.16■■□□□ 1.46
COL13A1-208ENST00000479733 TIGD1Q96MW7 591 aa24.16■■□□□ 1.46
COL13A1-208ENST00000479733 HDAC5Q9UQL6 1122 aa24.16■■□□□ 1.46
COL13A1-208ENST00000479733 SFPQP23246 707 aaKnown RBP eCLIP24.16■■□□□ 1.46
COL13A1-208ENST00000479733 EPHA10Q5JZY3 1008 aa24.16■■□□□ 1.46
COL13A1-208ENST00000479733 DBNLQ9UJU6 430 aaKnown RBP24.16■■□□□ 1.46
COL13A1-208ENST00000479733 PCDHA7Q9UN72 937 aa24.16■■□□□ 1.46
COL13A1-208ENST00000479733 N4BP2Q86UW6 1770 aaPredicted RBP24.15■■□□□ 1.46
COL13A1-208ENST00000479733 A0A0G2JLW4 131 aa24.15■■□□□ 1.46
COL13A1-208ENST00000479733 NDUFA8P51970 172 aa24.15■■□□□ 1.46
COL13A1-208ENST00000479733 RIC3Q7Z5B4 369 aa24.15■■□□□ 1.46
COL13A1-208ENST00000479733 SMARCC2Q8TAQ2 1214 aa24.15■■□□□ 1.46
COL13A1-208ENST00000479733 ZNF396Q96N95 335 aaPredicted RBP24.15■■□□□ 1.46
COL13A1-208ENST00000479733 POLR3GO15318 223 aaPredicted RBP24.14■■□□□ 1.46
COL13A1-208ENST00000479733 SF3A1Q15459 793 aaKnown RBP24.14■■□□□ 1.46
COL13A1-208ENST00000479733 PTPN21Q16825 1174 aa24.14■■□□□ 1.46
COL13A1-208ENST00000479733 CHMP4AQ9BY43 222 aa24.14■■□□□ 1.46
COL13A1-208ENST00000479733 DNAI1Q9UI46 699 aa24.14■■□□□ 1.46
COL13A1-208ENST00000479733 NWD1Q149M9 1564 aa24.14■■□□□ 1.46
COL13A1-208ENST00000479733 MYL6BP14649 208 aa24.14■■□□□ 1.45
COL13A1-208ENST00000479733 FHOD1Q9Y613 1164 aa24.14■■□□□ 1.45
COL13A1-208ENST00000479733 KIF2AO00139 706 aaPredicted RBP24.14■■□□□ 1.45
COL13A1-208ENST00000479733 POLR3DP05423 398 aaPredicted RBP24.14■■□□□ 1.45
COL13A1-208ENST00000479733 NAA16Q6N069 864 aaPredicted RBP24.14■■□□□ 1.45
COL13A1-208ENST00000479733 U3KPZ7 1027 aaPredicted RBP24.14■■□□□ 1.45
COL13A1-208ENST00000479733 PFKFB2O60825 505 aa24.13■■□□□ 1.45
COL13A1-208ENST00000479733 H2AFXP16104 143 aaPredicted RBP24.13■■□□□ 1.45
COL13A1-208ENST00000479733 TFCP2Q12800 502 aa24.13■■□□□ 1.45
COL13A1-208ENST00000479733 PTPRUQ92729 1446 aa24.13■■□□□ 1.45
COL13A1-208ENST00000479733 LMOD1P29536 600 aaPredicted RBP24.13■■□□□ 1.45
COL13A1-208ENST00000479733 ILDR1Q86SU0 546 aaPredicted RBP24.13■■□□□ 1.45
COL13A1-208ENST00000479733 MRPS27Q92552 414 aaKnown RBP24.13■■□□□ 1.45
COL13A1-208ENST00000479733 OSBPL5Q9H0X9 879 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms