RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 CPLX1O14810 134 aa13.21□□□□□ -0.3
GFM1-207ENST00000478254 SASH3O75995 380 aa13.21□□□□□ -0.3
GFM1-207ENST00000478254 FANCCQ00597 558 aa13.21□□□□□ -0.3
GFM1-207ENST00000478254 NPATQ14207 1427 aa13.2□□□□□ -0.3
GFM1-207ENST00000478254 PES1O00541 588 aaKnown RBP13.2□□□□□ -0.3
GFM1-207ENST00000478254 TOB2Q14106 344 aaPredicted RBP13.2□□□□□ -0.3
GFM1-207ENST00000478254 NECTIN1Q15223 517 aa13.2□□□□□ -0.3
GFM1-207ENST00000478254 SPECC1Q5M775 1068 aa13.2□□□□□ -0.3
GFM1-207ENST00000478254 FOXR1Q6PIV2 292 aa13.2□□□□□ -0.3
GFM1-207ENST00000478254 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
GFM1-207ENST00000478254 SSH2Q76I76 1423 aa13.2□□□□□ -0.3
GFM1-207ENST00000478254 COL3A1P02461 1466 aaPredicted RBP13.2□□□□□ -0.3
GFM1-207ENST00000478254 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
GFM1-207ENST00000478254 FAM160A1Q05DH4 1040 aa13.2□□□□□ -0.3
GFM1-207ENST00000478254 FKBP15Q5T1M5 1219 aa13.2□□□□□ -0.3
GFM1-207ENST00000478254 CCDC150Q8NCX0 1101 aa13.2□□□□□ -0.3
GFM1-207ENST00000478254 PARD6BQ9BYG5 372 aa13.2□□□□□ -0.3
GFM1-207ENST00000478254 CTAGE5O15320 804 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 JAKMIP3Q5VZ66 844 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 KNDC1Q76NI1 1749 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 ABCC1P33527 1531 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 GNAT3A8MTJ3 354 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 KCNQ3O43525 872 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 H2AFXP16104 143 aaPredicted RBP13.19□□□□□ -0.3
GFM1-207ENST00000478254 MTX1Q13505 466 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 KIF4BQ2VIQ3 1234 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 KLHL10Q6JEL2 608 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 ELP1O95163 1332 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 TMEM232C9JQI7 657 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 MYL6BP14649 208 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 AKAP17AQ02040 695 aaKnown RBP13.19□□□□□ -0.3
GFM1-207ENST00000478254 SCRN1Q12765 414 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 DHX8Q14562 1220 aaKnown RBP13.19□□□□□ -0.3
GFM1-207ENST00000478254 LONRF3Q496Y0 759 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 TTC31Q49AM3 519 aaPredicted RBP13.19□□□□□ -0.3
GFM1-207ENST00000478254 MICALL1Q8N3F8 863 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 EAF2Q96CJ1 260 aaPredicted RBP13.19□□□□□ -0.3
GFM1-207ENST00000478254 PUS7Q96PZ0 661 aaKnown RBP13.19□□□□□ -0.3
GFM1-207ENST00000478254 DEF6Q9H4E7 631 aa13.19□□□□□ -0.3
GFM1-207ENST00000478254 DHX16O60231 1041 aaKnown RBP13.18□□□□□ -0.3
GFM1-207ENST00000478254 N4BP1O75113 896 aaKnown RBP13.18□□□□□ -0.3
GFM1-207ENST00000478254 NLRP6P59044 892 aa13.18□□□□□ -0.3
GFM1-207ENST00000478254 RESTQ13127 1097 aa13.18□□□□□ -0.3
GFM1-207ENST00000478254 DPF2Q92785 391 aa13.18□□□□□ -0.3
GFM1-207ENST00000478254 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
GFM1-207ENST00000478254 MAP3K2Q9Y2U5 619 aa13.18□□□□□ -0.3
GFM1-207ENST00000478254 TTC21AQ8NDW8 1320 aa13.18□□□□□ -0.3
GFM1-207ENST00000478254 TFRCP02786 760 aaKnown RBP13.18□□□□□ -0.3
GFM1-207ENST00000478254 WDR24Q96S15 920 aa13.18□□□□□ -0.3
GFM1-207ENST00000478254 ZFYVE9O95405 1425 aa13.18□□□□□ -0.3
GFM1-207ENST00000478254 OLFM4Q6UX06 510 aa13.18□□□□□ -0.3
GFM1-207ENST00000478254 ERC1Q8IUD2 1116 aa13.18□□□□□ -0.3
GFM1-207ENST00000478254 EYA1Q99502 592 aa13.18□□□□□ -0.3
GFM1-207ENST00000478254 RXRAP19793 462 aa13.17□□□□□ -0.3
GFM1-207ENST00000478254 HSP90AB3PQ58FF7 597 aa13.17□□□□□ -0.3
GFM1-207ENST00000478254 AXDND1Q5T1B0 1012 aaPredicted RBP13.17□□□□□ -0.3
GFM1-207ENST00000478254 GPHNQ9NQX3 736 aaPredicted RBP13.17□□□□□ -0.3
GFM1-207ENST00000478254 FAN1Q9Y2M0 1017 aa13.17□□□□□ -0.3
GFM1-207ENST00000478254 CLIC4Q9Y696 253 aa13.17□□□□□ -0.3
GFM1-207ENST00000478254 LRRFIP1Q32MZ4 808 aaKnown RBP13.17□□□□□ -0.3
GFM1-207ENST00000478254 CC2D1AQ6P1N0 951 aaPredicted RBP13.17□□□□□ -0.3
GFM1-207ENST00000478254 NBPF11Q86T75 865 aa13.17□□□□□ -0.3
GFM1-207ENST00000478254 TRMT44Q8IYL2 757 aaKnown RBP13.17□□□□□ -0.3
GFM1-207ENST00000478254 DHX58Q96C10 678 aa13.17□□□□□ -0.3
GFM1-207ENST00000478254 ZSCAN16Q9H4T2 348 aaPredicted RBP13.17□□□□□ -0.3
GFM1-207ENST00000478254 KIAA0232Q92628 1395 aa13.17□□□□□ -0.3
GFM1-207ENST00000478254 SHROOM2Q13796 1616 aa13.16□□□□□ -0.3
GFM1-207ENST00000478254 CAVIN2O95810 425 aa13.16□□□□□ -0.3
GFM1-207ENST00000478254 LONRF2Q1L5Z9 754 aa13.16□□□□□ -0.3
GFM1-207ENST00000478254 DNAJC21Q5F1R6 531 aaKnown RBP13.16□□□□□ -0.3
GFM1-207ENST00000478254 CCDC82Q8N4S0 544 aa13.16□□□□□ -0.3
GFM1-207ENST00000478254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.16□□□□□ -0.3
GFM1-207ENST00000478254 ERBB3P21860 1342 aa13.16□□□□□ -0.3
GFM1-207ENST00000478254 ZSCAN12O43309 604 aa13.16□□□□□ -0.3
GFM1-207ENST00000478254 CDC25BP30305 580 aa13.16□□□□□ -0.3
GFM1-207ENST00000478254 MPRIPQ6WCQ1 1025 aa13.16□□□□□ -0.3
GFM1-207ENST00000478254 MAP4K1Q92918 833 aa13.16□□□□□ -0.3
GFM1-207ENST00000478254 ESF1Q9H501 851 aaKnown RBP13.16□□□□□ -0.3
GFM1-207ENST00000478254 TULP2O00295 520 aa13.16□□□□□ -0.3
GFM1-207ENST00000478254 KIAA1468Q9P260 1216 aa13.16□□□□□ -0.3
GFM1-207ENST00000478254 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 ZNF827Q17R98 1081 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 TM6SF1Q9BZW5 370 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 COBLO75128 1261 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 WDHD1O75717 1129 aaPredicted RBP13.15□□□□□ -0.3
GFM1-207ENST00000478254 RIC3Q7Z5B4 369 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 C8orf76Q96K31 380 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 H3BQF6 201 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 ZNF202O95125 648 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 MNAT1P51948 309 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 PNOCQ13519 176 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 FANCLQ9NW38 375 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 PPP2R2CQ9Y2T4 447 aa13.15□□□□□ -0.3
GFM1-207ENST00000478254 TADA3O75528 432 aa13.14□□□□□ -0.31
GFM1-207ENST00000478254 WASHC4Q2M389 1173 aa13.14□□□□□ -0.31
GFM1-207ENST00000478254 SARM1Q6SZW1 724 aa13.14□□□□□ -0.31
GFM1-207ENST00000478254 IL17REQ8NFR9 667 aa13.14□□□□□ -0.31
GFM1-207ENST00000478254 GOLGA1Q92805 767 aa13.14□□□□□ -0.31
GFM1-207ENST00000478254 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms