RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 ANKRD36BQ8N2N9 1353 aa11.03□□□□□ -0.64
CHD6-207ENST00000476641 ADAM32Q8TC27 787 aa11.02□□□□□ -0.65
CHD6-207ENST00000476641 POLR3GLQ9BT43 218 aa11.02□□□□□ -0.65
CHD6-207ENST00000476641 GGNBP2Q9H3C7 697 aa11.02□□□□□ -0.65
CHD6-207ENST00000476641 TMPRSS4Q9NRS4 437 aa11.02□□□□□ -0.65
CHD6-207ENST00000476641 TIMELESSQ9UNS1 1208 aa11.02□□□□□ -0.65
CHD6-207ENST00000476641 HSPA5P11021 654 aaKnown RBP11.01□□□□□ -0.65
CHD6-207ENST00000476641 RAB15P59190 212 aa11.01□□□□□ -0.65
CHD6-207ENST00000476641 EZH2Q15910 746 aaKnown RBP11.01□□□□□ -0.65
CHD6-207ENST00000476641 LTV1Q96GA3 475 aaPredicted RBP11.01□□□□□ -0.65
CHD6-207ENST00000476641 CARD10Q9BWT7 1032 aa11.01□□□□□ -0.65
CHD6-207ENST00000476641 THRAP3Q9Y2W1 955 aaKnown RBP11.01□□□□□ -0.65
CHD6-207ENST00000476641 NINLQ9Y2I6 1382 aa11.01□□□□□ -0.65
CHD6-207ENST00000476641 DISP2A7MBM2 1401 aa11.01□□□□□ -0.65
CHD6-207ENST00000476641 FYB1O15117 783 aa11□□□□□ -0.65
CHD6-207ENST00000476641 BAG6P46379 1132 aa11□□□□□ -0.65
CHD6-207ENST00000476641 RRS1Q15050 365 aaKnown RBP11□□□□□ -0.65
CHD6-207ENST00000476641 NBPF20Q3BBV1 942 aa11□□□□□ -0.65
CHD6-207ENST00000476641 KANK3Q6NY19 840 aa11□□□□□ -0.65
CHD6-207ENST00000476641 FAM196AQ6ZSG2 479 aa11□□□□□ -0.65
CHD6-207ENST00000476641 MARCH10Q8NA82 808 aaPredicted RBP11□□□□□ -0.65
CHD6-207ENST00000476641 ZNF784Q8NCA9 323 aaPredicted RBP11□□□□□ -0.65
CHD6-207ENST00000476641 ANKRD24Q8TF21 1146 aa11□□□□□ -0.65
CHD6-207ENST00000476641 SCARF2Q96GP6 870 aaPredicted RBP11□□□□□ -0.65
CHD6-207ENST00000476641 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
CHD6-207ENST00000476641 MAP3K19Q56UN5 1328 aa11□□□□□ -0.65
CHD6-207ENST00000476641 RGPD5Q99666 1765 aa11□□□□□ -0.65
CHD6-207ENST00000476641 APBA3O96018 575 aa10.99□□□□□ -0.65
CHD6-207ENST00000476641 ADH1AP07327 375 aa10.99□□□□□ -0.65
CHD6-207ENST00000476641 DDB1Q16531 1140 aa10.99□□□□□ -0.65
CHD6-207ENST00000476641 FOXD4L5Q5VV16 416 aaPredicted RBP10.99□□□□□ -0.65
CHD6-207ENST00000476641 LYPD4Q6UWN0 246 aa10.99□□□□□ -0.65
CHD6-207ENST00000476641 COG3Q96JB2 828 aa10.99□□□□□ -0.65
CHD6-207ENST00000476641 GPSM3Q9Y4H4 160 aa10.99□□□□□ -0.65
CHD6-207ENST00000476641 LRRC37A3O60309 1634 aa10.98□□□□□ -0.65
CHD6-207ENST00000476641 USP54Q70EL1 1684 aa10.98□□□□□ -0.65
CHD6-207ENST00000476641 IGHA1P01876 353 aa10.98□□□□□ -0.65
CHD6-207ENST00000476641 CAMKK2Q96RR4 588 aa10.98□□□□□ -0.65
CHD6-207ENST00000476641 NSD3Q9BZ95 1437 aa10.98□□□□□ -0.65
CHD6-207ENST00000476641 TNS1Q9HBL0 1735 aaKnown RBP10.98□□□□□ -0.65
CHD6-207ENST00000476641 HOXC9P31274 260 aa10.97□□□□□ -0.65
CHD6-207ENST00000476641 MAP3K10Q02779 954 aa10.97□□□□□ -0.65
CHD6-207ENST00000476641 SRSF11Q05519 484 aaKnown RBP10.97□□□□□ -0.65
CHD6-207ENST00000476641 IP6K1Q92551 441 aa10.97□□□□□ -0.65
CHD6-207ENST00000476641 CUEDC1Q9NWM3 386 aaPredicted RBP10.97□□□□□ -0.65
CHD6-207ENST00000476641 PARP4Q9UKK3 1724 aaKnown RBP10.97□□□□□ -0.65
CHD6-207ENST00000476641 MYOM1P52179 1685 aa10.96□□□□□ -0.65
CHD6-207ENST00000476641 SLC24A1O60721 1099 aa10.96□□□□□ -0.65
CHD6-207ENST00000476641 LILRA1O75019 489 aa10.96□□□□□ -0.65
CHD6-207ENST00000476641 ADD1P35611 737 aaKnown RBP10.96□□□□□ -0.65
CHD6-207ENST00000476641 PTGIRP43119 386 aa10.96□□□□□ -0.65
CHD6-207ENST00000476641 ABCC6O95255 1503 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 OVOS2A0A0G2JMS6 1433 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 CCDC7Q96M83 1385 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 ERVH48-1M5A8F1 160 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 AMPHP49418 695 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 EIF4G2P78344 907 aaKnown RBP eCLIP10.95□□□□□ -0.66
CHD6-207ENST00000476641 FOXK2Q01167 660 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 GAS6Q14393 721 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 R3HDM1Q15032 1099 aaKnown RBP10.95□□□□□ -0.66
CHD6-207ENST00000476641 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 LYSMD3Q7Z3D4 306 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 USHBP1Q8N6Y0 703 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 KDF1Q8NAX2 398 aaPredicted RBP10.95□□□□□ -0.66
CHD6-207ENST00000476641 LTN1O94822 1766 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 RGPD1P0DJD0 1748 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 PEAK1Q9H792 1746 aa10.95□□□□□ -0.66
CHD6-207ENST00000476641 TNS2Q63HR2 1409 aa10.94□□□□□ -0.66
CHD6-207ENST00000476641 EXOC5O00471 708 aa10.94□□□□□ -0.66
CHD6-207ENST00000476641 KCNQ2O43526 872 aa10.94□□□□□ -0.66
CHD6-207ENST00000476641 AP1G2O75843 785 aa10.94□□□□□ -0.66
CHD6-207ENST00000476641 CELA2BP08218 269 aaPredicted RBP10.94□□□□□ -0.66
CHD6-207ENST00000476641 SKIV2LQ15477 1246 aaKnown RBP10.94□□□□□ -0.66
CHD6-207ENST00000476641 DZIP3Q86Y13 1208 aaKnown RBP10.94□□□□□ -0.66
CHD6-207ENST00000476641 ACSBG1Q96GR2 724 aa10.94□□□□□ -0.66
CHD6-207ENST00000476641 IL2RBP14784 551 aa10.93□□□□□ -0.66
CHD6-207ENST00000476641 HSP90AB2PQ58FF8 381 aa10.93□□□□□ -0.66
CHD6-207ENST00000476641 PROCA1Q8NCQ7 364 aaPredicted RBP10.93□□□□□ -0.66
CHD6-207ENST00000476641 CDCA7Q9BWT1 371 aaPredicted RBP10.93□□□□□ -0.66
CHD6-207ENST00000476641 WNK3Q9BYP7 1800 aa10.93□□□□□ -0.66
CHD6-207ENST00000476641 NBPF6Q5VWK0 638 aa10.92□□□□□ -0.66
CHD6-207ENST00000476641 PPP2R2DQ66LE6 453 aa10.92□□□□□ -0.66
CHD6-207ENST00000476641 PRICKLE2Q7Z3G6 844 aa10.92□□□□□ -0.66
CHD6-207ENST00000476641 PNMA1Q8ND90 353 aa10.92□□□□□ -0.66
CHD6-207ENST00000476641 EPS8L1Q8TE68 723 aa10.92□□□□□ -0.66
CHD6-207ENST00000476641 NBPF4Q96M43 638 aa10.92□□□□□ -0.66
CHD6-207ENST00000476641 MEGF6O75095 1541 aa10.91□□□□□ -0.66
CHD6-207ENST00000476641 RHOQP17081 205 aa10.91□□□□□ -0.66
CHD6-207ENST00000476641 TNNT2P45379 298 aaPredicted RBP10.91□□□□□ -0.66
CHD6-207ENST00000476641 PANK3Q9H999 370 aa10.91□□□□□ -0.66
CHD6-207ENST00000476641 PPM1GO15355 546 aaPredicted RBP10.9□□□□□ -0.66
CHD6-207ENST00000476641 SH3D19Q5HYK7 790 aa10.9□□□□□ -0.66
CHD6-207ENST00000476641 DDX54Q8TDD1 881 aaKnown RBP10.9□□□□□ -0.66
CHD6-207ENST00000476641 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.9□□□□□ -0.66
CHD6-207ENST00000476641 CYLDQ9NQC7 956 aa10.9□□□□□ -0.66
CHD6-207ENST00000476641 ENAMQ9NRM1 1142 aa10.9□□□□□ -0.66
CHD6-207ENST00000476641 RTL1A6NKG5 1358 aa10.9□□□□□ -0.67
CHD6-207ENST00000476641 ESPNB1AK53 854 aa10.89□□□□□ -0.67
CHD6-207ENST00000476641 BCL9O00512 1426 aa10.89□□□□□ -0.67
CHD6-207ENST00000476641 CGNL1Q0VF96 1302 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms