RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 COL3A1P02461 1466 aaPredicted RBP18.62■□□□□ 0.57
ATG9A-220ENST00000475339 RANBP2P49792 3224 aaKnown RBP18.62■□□□□ 0.57
ATG9A-220ENST00000475339 C6orf229H3BNL8 230 aa18.61■□□□□ 0.57
ATG9A-220ENST00000475339 TTLL12Q14166 644 aaPredicted RBP18.61■□□□□ 0.57
ATG9A-220ENST00000475339 ARMC5Q96C12 935 aa18.61■□□□□ 0.57
ATG9A-220ENST00000475339 POLLQ9UGP5 575 aa18.61■□□□□ 0.57
ATG9A-220ENST00000475339 VIL1P09327 827 aaKnown RBP18.6■□□□□ 0.57
ATG9A-220ENST00000475339 PTPN22Q9Y2R2 807 aa18.6■□□□□ 0.57
ATG9A-220ENST00000475339 RBBP6Q7Z6E9 1792 aaKnown RBP18.6■□□□□ 0.57
ATG9A-220ENST00000475339 COL6A3P12111 3177 aa18.59■□□□□ 0.57
ATG9A-220ENST00000475339 TAF1P21675 1872 aa18.59■□□□□ 0.57
ATG9A-220ENST00000475339 ZNF280AP59817 542 aaPredicted RBP18.59■□□□□ 0.57
ATG9A-220ENST00000475339 TAF7Q15545 349 aaPredicted RBP18.59■□□□□ 0.57
ATG9A-220ENST00000475339 CHRDL2Q6WN34 429 aa18.59■□□□□ 0.57
ATG9A-220ENST00000475339 TMC4Q7Z404 712 aa18.59■□□□□ 0.57
ATG9A-220ENST00000475339 RSPH6AQ9H0K4 717 aa18.59■□□□□ 0.57
ATG9A-220ENST00000475339 LAMB4A4D0S4 1761 aa18.58■□□□□ 0.56
ATG9A-220ENST00000475339 GPSM2P81274 684 aa18.57■□□□□ 0.56
ATG9A-220ENST00000475339 TMEM106CQ9BVX2 250 aa18.57■□□□□ 0.56
ATG9A-220ENST00000475339 RBM27Q9P2N5 1060 aaKnown RBP18.57■□□□□ 0.56
ATG9A-220ENST00000475339 PITPNM2Q9BZ72 1349 aa18.56■□□□□ 0.56
ATG9A-220ENST00000475339 LAMB2P55268 1798 aa18.56■□□□□ 0.56
ATG9A-220ENST00000475339 ALDH1A1P00352 501 aa18.56■□□□□ 0.56
ATG9A-220ENST00000475339 PTPN12Q05209 780 aaKnown RBP18.56■□□□□ 0.56
ATG9A-220ENST00000475339 SCN9AQ15858 1988 aa18.55■□□□□ 0.56
ATG9A-220ENST00000475339 TCIRG1Q13488 830 aa18.55■□□□□ 0.56
ATG9A-220ENST00000475339 CELF1Q92879 486 aaKnown RBP18.55■□□□□ 0.56
ATG9A-220ENST00000475339 EYA3Q99504 573 aa18.55■□□□□ 0.56
ATG9A-220ENST00000475339 MYOZ2Q9NPC6 264 aa18.55■□□□□ 0.56
ATG9A-220ENST00000475339 ANKRD36CQ5JPF3 1778 aa18.55■□□□□ 0.56
ATG9A-220ENST00000475339 SPRYD7Q5W111 196 aa18.54■□□□□ 0.56
ATG9A-220ENST00000475339 CD99L2Q8TCZ2 262 aa18.54■□□□□ 0.56
ATG9A-220ENST00000475339 THUMPD2Q9BTF0 503 aaKnown RBP18.54■□□□□ 0.56
ATG9A-220ENST00000475339 LRRC37AA6NMS7 1700 aa18.54■□□□□ 0.56
ATG9A-220ENST00000475339 USP17L8P0C7I0 530 aa18.53■□□□□ 0.56
ATG9A-220ENST00000475339 PRKG1Q13976 671 aa18.53■□□□□ 0.56
ATG9A-220ENST00000475339 RSBN1LQ6PCB5 846 aaPredicted RBP18.53■□□□□ 0.56
ATG9A-220ENST00000475339 NLRP10Q86W26 655 aa18.53■□□□□ 0.56
ATG9A-220ENST00000475339 IFNL1Q8IU54 200 aa18.53■□□□□ 0.56
ATG9A-220ENST00000475339 AGBL3Q8NEM8 1001 aa18.53■□□□□ 0.56
ATG9A-220ENST00000475339 TBC1D16Q8TBP0 767 aa18.53■□□□□ 0.56
ATG9A-220ENST00000475339 ERO1AQ96HE7 468 aa18.53■□□□□ 0.56
ATG9A-220ENST00000475339 ZNF333Q96JL9 665 aa18.53■□□□□ 0.56
ATG9A-220ENST00000475339 TRMT112Q9UI30 125 aaKnown RBP18.53■□□□□ 0.56
ATG9A-220ENST00000475339 EIF4A1P60842 406 aaKnown RBP18.52■□□□□ 0.56
ATG9A-220ENST00000475339 CAP1Q01518 475 aa18.52■□□□□ 0.56
ATG9A-220ENST00000475339 ZNF428Q96B54 188 aa18.52■□□□□ 0.56
ATG9A-220ENST00000475339 ZC3H12CQ9C0D7 883 aaKnown RBP18.52■□□□□ 0.56
ATG9A-220ENST00000475339 EFCC1Q9HA90 598 aa18.52■□□□□ 0.56
ATG9A-220ENST00000475339 SH3TC1Q8TE82 1336 aa18.51■□□□□ 0.55
ATG9A-220ENST00000475339 G3V3G9 751 aa18.51■□□□□ 0.55
ATG9A-220ENST00000475339 HTATSF1O43719 755 aaKnown RBP18.51■□□□□ 0.55
ATG9A-220ENST00000475339 NF2P35240 595 aa18.51■□□□□ 0.55
ATG9A-220ENST00000475339 NBPF9Q3BBW0 867 aa18.51■□□□□ 0.55
ATG9A-220ENST00000475339 DCAF8Q5TAQ9 597 aa18.51■□□□□ 0.55
ATG9A-220ENST00000475339 GMLQ99445 158 aa18.51■□□□□ 0.55
ATG9A-220ENST00000475339 ZNF609O15014 1411 aa18.5■□□□□ 0.55
ATG9A-220ENST00000475339 IGF2BP3O00425 579 aaKnown RBP eCLIP18.5■□□□□ 0.551e-6■□□□□ 8.1
ATG9A-220ENST00000475339 SLC4A8Q2Y0W8 1093 aa18.5■□□□□ 0.55
ATG9A-220ENST00000475339 LRP10Q7Z4F1 713 aa18.5■□□□□ 0.55
ATG9A-220ENST00000475339 MANSC4A6NHS7 340 aaPredicted RBP18.49■□□□□ 0.55
ATG9A-220ENST00000475339 MYCP01106 439 aaPredicted RBP18.49■□□□□ 0.55
ATG9A-220ENST00000475339 MNX1P50219 401 aaPredicted RBP18.49■□□□□ 0.55
ATG9A-220ENST00000475339 INHBEP58166 350 aa18.49■□□□□ 0.55
ATG9A-220ENST00000475339 DDX10Q13206 875 aaKnown RBP18.49■□□□□ 0.55
ATG9A-220ENST00000475339 ARMC9Q7Z3E5 817 aa18.49■□□□□ 0.55
ATG9A-220ENST00000475339 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
ATG9A-220ENST00000475339 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.49■□□□□ 0.55
ATG9A-220ENST00000475339 DDX60Q8IY21 1712 aaKnown RBP18.49■□□□□ 0.55
ATG9A-220ENST00000475339 ANXA1P04083 346 aa18.48■□□□□ 0.55
ATG9A-220ENST00000475339 LDLRAD1Q5T700 205 aa18.48■□□□□ 0.55
ATG9A-220ENST00000475339 ERBB4Q15303 1308 aa18.48■□□□□ 0.55
ATG9A-220ENST00000475339 CRHR2Q13324 411 aa18.47■□□□□ 0.55
ATG9A-220ENST00000475339 PDIA6Q15084 440 aa18.47■□□□□ 0.55
ATG9A-220ENST00000475339 PROSER3Q2NL68 480 aa18.47■□□□□ 0.55
ATG9A-220ENST00000475339 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
ATG9A-220ENST00000475339 ANGEL1Q9UNK9 670 aaKnown RBP18.47■□□□□ 0.55
ATG9A-220ENST00000475339 FZD1Q9UP38 647 aa18.47■□□□□ 0.55
ATG9A-220ENST00000475339 LAMA3Q16787 3333 aa18.47■□□□□ 0.55
ATG9A-220ENST00000475339 COL4A1P02462 1669 aa18.47■□□□□ 0.55
ATG9A-220ENST00000475339 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
ATG9A-220ENST00000475339 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.55
ATG9A-220ENST00000475339 SP3Q02447 781 aa18.46■□□□□ 0.55
ATG9A-220ENST00000475339 SLC9C1Q4G0N8 1177 aa18.46■□□□□ 0.55
ATG9A-220ENST00000475339 HSP90AB3PQ58FF7 597 aa18.46■□□□□ 0.55
ATG9A-220ENST00000475339 DPF3Q92784 378 aa18.46■□□□□ 0.55
ATG9A-220ENST00000475339 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
ATG9A-220ENST00000475339 WTIPA6NIX2 430 aaPredicted RBP18.45■□□□□ 0.54
ATG9A-220ENST00000475339 UFL1O94874 794 aa18.45■□□□□ 0.54
ATG9A-220ENST00000475339 NBPF11Q86T75 865 aa18.45■□□□□ 0.54
ATG9A-220ENST00000475339 SLC10A4Q96EP9 437 aa18.45■□□□□ 0.54
ATG9A-220ENST00000475339 PTCH2Q9Y6C5 1203 aa18.45■□□□□ 0.54
ATG9A-220ENST00000475339 WNT10BO00744 389 aa18.44■□□□□ 0.54
ATG9A-220ENST00000475339 EIF2S2P20042 333 aaKnown RBP18.44■□□□□ 0.54
ATG9A-220ENST00000475339 SF3B3Q15393 1217 aaKnown RBP18.44■□□□□ 0.54
ATG9A-220ENST00000475339 PRO3102Q9H379 93 aa18.44■□□□□ 0.54
ATG9A-220ENST00000475339 KDM3BQ7LBC6 1761 aa18.43■□□□□ 0.54
ATG9A-220ENST00000475339 RPS8P62241 208 aaKnown RBP18.43■□□□□ 0.54
ATG9A-220ENST00000475339 AIMP1Q12904 312 aaKnown RBP18.43■□□□□ 0.54
ATG9A-220ENST00000475339 COPS6Q7L5N1 327 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms