RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 GLTPD2A6NH11 291 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 MAP2K1Q02750 393 aaPredicted RBP10.39□□□□□ -0.75
LDHB-206ENST00000470985 PDXDC2PQ6P474 469 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 NLRP13Q86W25 1043 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 PROCA1Q8NCQ7 364 aaPredicted RBP10.39□□□□□ -0.75
LDHB-206ENST00000470985 GCC1Q96CN9 775 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 ZFP42Q96MM3 310 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 ARHGAP9Q9BRR9 750 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 CARD14Q9BXL6 1004 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 KIF13BQ9NQT8 1826 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 CPSF1Q10570 1443 aaKnown RBP10.39□□□□□ -0.75
LDHB-206ENST00000470985 ROCK1Q13464 1354 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 BRCA1P38398 1863 aaKnown RBP10.38□□□□□ -0.75
LDHB-206ENST00000470985 PITPNM2Q9BZ72 1349 aa10.38□□□□□ -0.75
LDHB-206ENST00000470985 C5P01031 1676 aa10.38□□□□□ -0.75
LDHB-206ENST00000470985 RASSF7Q02833 373 aa10.38□□□□□ -0.75
LDHB-206ENST00000470985 CFAP70Q5T0N1 1121 aa10.38□□□□□ -0.75
LDHB-206ENST00000470985 NUDT16Q96DE0 195 aaKnown RBP10.38□□□□□ -0.75
LDHB-206ENST00000470985 DCAF5Q96JK2 942 aa10.38□□□□□ -0.75
LDHB-206ENST00000470985 PCMTD1Q96MG8 357 aaPredicted RBP10.38□□□□□ -0.75
LDHB-206ENST00000470985 FKBPLQ9UIM3 349 aa10.38□□□□□ -0.75
LDHB-206ENST00000470985 CDV3Q9UKY7 258 aaKnown RBP10.38□□□□□ -0.75
LDHB-206ENST00000470985 LTBP1Q14766 1721 aa10.38□□□□□ -0.75
LDHB-206ENST00000470985 TIMP2P16035 220 aa10.37□□□□□ -0.75
LDHB-206ENST00000470985 TGFB2P61812 414 aa10.37□□□□□ -0.75
LDHB-206ENST00000470985 PTK2Q05397 1052 aa10.37□□□□□ -0.75
LDHB-206ENST00000470985 DGKZQ13574 1117 aa10.37□□□□□ -0.75
LDHB-206ENST00000470985 RGL3Q3MIN7 710 aa10.37□□□□□ -0.75
LDHB-206ENST00000470985 TRIM46Q7Z4K8 759 aa10.37□□□□□ -0.75
LDHB-206ENST00000470985 FLAD1Q8NFF5 587 aa10.37□□□□□ -0.75
LDHB-206ENST00000470985 C14orf93Q9H972 538 aaKnown RBP10.37□□□□□ -0.75
LDHB-206ENST00000470985 NXF1Q9UBU9 619 aaKnown RBP10.37□□□□□ -0.75
LDHB-206ENST00000470985 EMILIN1Q9Y6C2 1016 aa10.37□□□□□ -0.75
LDHB-206ENST00000470985 RGPD5Q99666 1765 aa10.37□□□□□ -0.75
LDHB-206ENST00000470985 WDR33Q9C0J8 1336 aaKnown RBP10.36□□□□□ -0.75
LDHB-206ENST00000470985 ZC3H4Q9UPT8 1303 aaKnown RBP10.36□□□□□ -0.75
LDHB-206ENST00000470985 ARFGEF1Q9Y6D6 1849 aa10.36□□□□□ -0.75
LDHB-206ENST00000470985 KCNA3P22001 575 aa10.36□□□□□ -0.75
LDHB-206ENST00000470985 GRM5P41594 1212 aa10.36□□□□□ -0.75
LDHB-206ENST00000470985 INSM1Q01101 510 aaPredicted RBP10.36□□□□□ -0.75
LDHB-206ENST00000470985 C4orf48Q5BLP8 95 aa10.36□□□□□ -0.75
LDHB-206ENST00000470985 PPP2R2DQ66LE6 453 aa10.36□□□□□ -0.75
LDHB-206ENST00000470985 SLC10A4Q96EP9 437 aa10.36□□□□□ -0.75
LDHB-206ENST00000470985 PURBQ96QR8 312 aaKnown RBP10.36□□□□□ -0.75
LDHB-206ENST00000470985 MAP4K5Q9Y4K4 846 aa10.36□□□□□ -0.75
LDHB-206ENST00000470985 DOT1LQ8TEK3 1739 aa10.36□□□□□ -0.75
LDHB-206ENST00000470985 KDM6AO15550 1401 aaPredicted RBP10.35□□□□□ -0.75
LDHB-206ENST00000470985 TMEM88BA6NKF7 163 aa10.35□□□□□ -0.75
LDHB-206ENST00000470985 MMP10P09238 476 aa10.35□□□□□ -0.75
LDHB-206ENST00000470985 NEUROD2Q15784 382 aa10.35□□□□□ -0.75
LDHB-206ENST00000470985 SH3BP5LQ7L8J4 393 aa10.35□□□□□ -0.75
LDHB-206ENST00000470985 SH3RF1Q7Z6J0 888 aa10.35□□□□□ -0.75
LDHB-206ENST00000470985 NPAS3Q8IXF0 933 aa10.35□□□□□ -0.75
LDHB-206ENST00000470985 TRMT44Q8IYL2 757 aaKnown RBP10.35□□□□□ -0.75
LDHB-206ENST00000470985 LRRN4Q8WUT4 740 aa10.35□□□□□ -0.75
LDHB-206ENST00000470985 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.35□□□□□ -0.75
LDHB-206ENST00000470985 SBF1O95248 1867 aa10.35□□□□□ -0.75
LDHB-206ENST00000470985 THSD7BQ9C0I4 1608 aa10.35□□□□□ -0.75
LDHB-206ENST00000470985 ANKRD36BQ8N2N9 1353 aa10.35□□□□□ -0.75
LDHB-206ENST00000470985 RASSF10A6NK89 507 aa10.34□□□□□ -0.75
LDHB-206ENST00000470985 BMP2P12643 396 aa10.34□□□□□ -0.75
LDHB-206ENST00000470985 IL2RBP14784 551 aa10.34□□□□□ -0.75
LDHB-206ENST00000470985 FSHRP23945 695 aa10.34□□□□□ -0.75
LDHB-206ENST00000470985 NFX1Q12986 1120 aaKnown RBP10.34□□□□□ -0.75
LDHB-206ENST00000470985 SLC17A8Q8NDX2 589 aa10.34□□□□□ -0.75
LDHB-206ENST00000470985 ITPKCQ96DU7 683 aa10.34□□□□□ -0.75
LDHB-206ENST00000470985 PGPEP1Q9NXJ5 209 aa10.34□□□□□ -0.75
LDHB-206ENST00000470985 ADAMTS7Q9UKP4 1686 aa10.34□□□□□ -0.75
LDHB-206ENST00000470985 MAN1A2O60476 641 aa10.33□□□□□ -0.76
LDHB-206ENST00000470985 DHX9Q08211 1270 aaKnown RBP10.33□□□□□ -0.76
LDHB-206ENST00000470985 NR6A1Q15406 480 aa10.33□□□□□ -0.76
LDHB-206ENST00000470985 CCDC116Q8IYX3 515 aa10.33□□□□□ -0.76
LDHB-206ENST00000470985 DDX54Q8TDD1 881 aaKnown RBP10.33□□□□□ -0.76
LDHB-206ENST00000470985 C1QTNF2Q9BXJ5 285 aa10.33□□□□□ -0.76
LDHB-206ENST00000470985 DEFB115Q30KQ5 88 aa10.32□□□□□ -0.76
LDHB-206ENST00000470985 C6orf118Q5T5N4 469 aa10.32□□□□□ -0.76
LDHB-206ENST00000470985 ARHGEF25Q86VW2 580 aa10.32□□□□□ -0.76
LDHB-206ENST00000470985 IRF7Q92985 503 aa10.32□□□□□ -0.76
LDHB-206ENST00000470985 TSEN34Q9BSV6 310 aaKnown RBP10.32□□□□□ -0.76
LDHB-206ENST00000470985 ZFAND3Q9H8U3 227 aa10.32□□□□□ -0.76
LDHB-206ENST00000470985 GOPCQ9HD26 462 aa10.32□□□□□ -0.76
LDHB-206ENST00000470985 TRAK1Q9UPV9 953 aa10.32□□□□□ -0.76
LDHB-206ENST00000470985 GPSM3Q9Y4H4 160 aa10.32□□□□□ -0.76
LDHB-206ENST00000470985 C4BP0C0L5 1744 aa10.32□□□□□ -0.76
LDHB-206ENST00000470985 TIAM2Q8IVF5 1701 aa10.32□□□□□ -0.76
LDHB-206ENST00000470985 ERFEQ4G0M1 354 aa10.31□□□□□ -0.76
LDHB-206ENST00000470985 TMEM259Q4ZIN3 620 aa10.31□□□□□ -0.76
LDHB-206ENST00000470985 DALRD3Q5D0E6 543 aaKnown RBP10.31□□□□□ -0.76
LDHB-206ENST00000470985 KLF16Q9BXK1 252 aaPredicted RBP10.31□□□□□ -0.76
LDHB-206ENST00000470985 CASP8AP2Q9UKL3 1982 aa10.31□□□□□ -0.76
LDHB-206ENST00000470985 UBR3Q6ZT12 1888 aa10.3□□□□□ -0.76
LDHB-206ENST00000470985 USP47Q96K76 1375 aa10.3□□□□□ -0.76
LDHB-206ENST00000470985 NR3C2P08235 984 aa10.3□□□□□ -0.76
LDHB-206ENST00000470985 IL27Q8NEV9 243 aa10.3□□□□□ -0.76
LDHB-206ENST00000470985 MKI67P46013 3256 aaKnown RBP10.3□□□□□ -0.76
LDHB-206ENST00000470985 ADGRB1O14514 1584 aa10.3□□□□□ -0.76
LDHB-206ENST00000470985 COL6A3P12111 3177 aa10.3□□□□□ -0.76
LDHB-206ENST00000470985 TAF1LQ8IZX4 1826 aa10.29□□□□□ -0.76
LDHB-206ENST00000470985 NBPF15Q8N660 670 aa10.29□□□□□ -0.76
LDHB-206ENST00000470985 NLRP2Q9NX02 1062 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms