RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 GHRHP01286 108 aa7.39□□□□□ -1.23
GPNMB-207ENST00000468723 AFF1P51825 1210 aaKnown RBP7.39□□□□□ -1.23
GPNMB-207ENST00000468723 COL13A1Q5TAT6 717 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-207ENST00000468723 TXNDC2Q86VQ3 553 aa7.39□□□□□ -1.23
GPNMB-207ENST00000468723 GLYCTKQ8IVS8 523 aa7.39□□□□□ -1.23
GPNMB-207ENST00000468723 OR13H1Q8NG92 308 aa7.39□□□□□ -1.23
GPNMB-207ENST00000468723 PRDM6Q9NQX0 595 aa7.39□□□□□ -1.23
GPNMB-207ENST00000468723 CNTN3Q9P232 1028 aa7.39□□□□□ -1.23
GPNMB-207ENST00000468723 SOX18P35713 384 aa7.38□□□□□ -1.23
GPNMB-207ENST00000468723 PDE12Q6L8Q7 609 aaKnown RBP7.38□□□□□ -1.23
GPNMB-207ENST00000468723 GPAT2Q6NUI2 795 aa7.38□□□□□ -1.23
GPNMB-207ENST00000468723 DMRTC2Q8IXT2 367 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-207ENST00000468723 PLD4Q96BZ4 506 aa7.38□□□□□ -1.23
GPNMB-207ENST00000468723 KANSL3Q9P2N6 904 aa7.38□□□□□ -1.23
GPNMB-207ENST00000468723 EGFL7Q9UHF1 273 aa7.38□□□□□ -1.23
GPNMB-207ENST00000468723 RPLP1P05386 114 aaKnown RBP7.37□□□□□ -1.23
GPNMB-207ENST00000468723 TRIM28Q13263 835 aaKnown RBP7.37□□□□□ -1.23
GPNMB-207ENST00000468723 PLA2G4EQ3MJ16 856 aa7.37□□□□□ -1.23
GPNMB-207ENST00000468723 CCER1Q8TC90 406 aaPredicted RBP7.37□□□□□ -1.23
GPNMB-207ENST00000468723 FRRS1LQ9P0K9 344 aa7.37□□□□□ -1.23
GPNMB-207ENST00000468723 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.37□□□□□ -1.23
GPNMB-207ENST00000468723 SPDYE3A6NKU9 549 aa7.36□□□□□ -1.23
GPNMB-207ENST00000468723 HYAL2Q12891 473 aa7.36□□□□□ -1.23
GPNMB-207ENST00000468723 GRIK5Q16478 980 aa7.36□□□□□ -1.23
GPNMB-207ENST00000468723 ECM1Q16610 540 aa7.36□□□□□ -1.23
GPNMB-207ENST00000468723 GDF6Q6KF10 455 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-207ENST00000468723 C1orf127Q8N9H9 656 aa7.36□□□□□ -1.23
GPNMB-207ENST00000468723 RBSNQ9H1K0 784 aa7.36□□□□□ -1.23
GPNMB-207ENST00000468723 ITGB2P05107 769 aa7.35□□□□□ -1.23
GPNMB-207ENST00000468723 ATP11AP98196 1134 aa7.35□□□□□ -1.23
GPNMB-207ENST00000468723 GRIK4Q16099 956 aa7.35□□□□□ -1.23
GPNMB-207ENST00000468723 PRRT3Q5FWE3 981 aa7.35□□□□□ -1.23
GPNMB-207ENST00000468723 XKR5Q6UX68 686 aa7.35□□□□□ -1.23
GPNMB-207ENST00000468723 SPACA7Q96KW9 195 aa7.35□□□□□ -1.23
GPNMB-207ENST00000468723 BRD1O95696 1058 aa7.34□□□□□ -1.23
GPNMB-207ENST00000468723 SPATA31C1P0DKV0 1188 aa7.34□□□□□ -1.23
GPNMB-207ENST00000468723 HOXD8P13378 290 aaPredicted RBP7.34□□□□□ -1.23
GPNMB-207ENST00000468723 CES1P23141 567 aa7.34□□□□□ -1.23
GPNMB-207ENST00000468723 ARHGAP4P98171 946 aa7.34□□□□□ -1.23
GPNMB-207ENST00000468723 MSL1Q68DK7 614 aa7.34□□□□□ -1.23
GPNMB-207ENST00000468723 ALYREFQ86V81 257 aaKnown RBP7.34□□□□□ -1.23
GPNMB-207ENST00000468723 NCAPG2Q86XI2 1143 aa7.34□□□□□ -1.23
GPNMB-207ENST00000468723 FOXD3Q9UJU5 478 aaPredicted RBP7.34□□□□□ -1.23
GPNMB-207ENST00000468723 BRPF3Q9ULD4 1205 aa7.34□□□□□ -1.23
GPNMB-207ENST00000468723 TRIM33Q9UPN9 1127 aa7.34□□□□□ -1.23
GPNMB-207ENST00000468723 A0A0A0MRY4 1105 aa7.33□□□□□ -1.24
GPNMB-207ENST00000468723 C1QTNF9BB2RNN3 333 aa7.33□□□□□ -1.24
GPNMB-207ENST00000468723 ACPPP15309 386 aa7.33□□□□□ -1.24
GPNMB-207ENST00000468723 CHRNA4P43681 627 aa7.33□□□□□ -1.24
GPNMB-207ENST00000468723 USP5P45974 858 aa7.33□□□□□ -1.24
GPNMB-207ENST00000468723 CEP135Q66GS9 1140 aa7.33□□□□□ -1.24
GPNMB-207ENST00000468723 CD163Q86VB7 1156 aa7.33□□□□□ -1.24
GPNMB-207ENST00000468723 WFDC8Q8IUA0 241 aa7.33□□□□□ -1.24
GPNMB-207ENST00000468723 TTC9Q92623 222 aa7.33□□□□□ -1.24
GPNMB-207ENST00000468723 RASSF4Q9H2L5 321 aa7.33□□□□□ -1.24
GPNMB-207ENST00000468723 EREGO14944 169 aa7.32□□□□□ -1.24
GPNMB-207ENST00000468723 TNFRSF21O75509 655 aa7.32□□□□□ -1.24
GPNMB-207ENST00000468723 TRPA1O75762 1119 aa7.32□□□□□ -1.24
GPNMB-207ENST00000468723 RAC1P63000 192 aa7.32□□□□□ -1.24
GPNMB-207ENST00000468723 GJD3Q8N144 294 aa7.32□□□□□ -1.24
GPNMB-207ENST00000468723 IL22RA1Q8N6P7 574 aa7.32□□□□□ -1.24
GPNMB-207ENST00000468723 LACRTQ9GZZ8 138 aa7.32□□□□□ -1.24
GPNMB-207ENST00000468723 CHRDQ9H2X0 955 aa7.32□□□□□ -1.24
GPNMB-207ENST00000468723 SOWAHDA6NJG2 315 aa7.31□□□□□ -1.24
GPNMB-207ENST00000468723 PHACTR2O75167 634 aa7.31□□□□□ -1.24
GPNMB-207ENST00000468723 KIF4AO95239 1232 aa7.31□□□□□ -1.24
GPNMB-207ENST00000468723 APBA3O96018 575 aa7.31□□□□□ -1.24
GPNMB-207ENST00000468723 BAG6P46379 1132 aa7.31□□□□□ -1.24
GPNMB-207ENST00000468723 EHHADHQ08426 723 aa7.31□□□□□ -1.24
GPNMB-207ENST00000468723 CEP120Q8N960 986 aa7.31□□□□□ -1.24
GPNMB-207ENST00000468723 SPOCK3Q9BQ16 436 aa7.31□□□□□ -1.24
GPNMB-207ENST00000468723 BIN2Q9UBW5 565 aaPredicted RBP7.31□□□□□ -1.24
GPNMB-207ENST00000468723 SALL4Q9UJQ4 1053 aa7.31□□□□□ -1.24
GPNMB-207ENST00000468723 MSTNO14793 375 aa7.3□□□□□ -1.24
GPNMB-207ENST00000468723 NDUFB5O43674 189 aa7.3□□□□□ -1.24
GPNMB-207ENST00000468723 CDC25BP30305 580 aa7.3□□□□□ -1.24
GPNMB-207ENST00000468723 SHISA2Q6UWI4 295 aa7.3□□□□□ -1.24
GPNMB-207ENST00000468723 TMC1Q8TDI8 760 aa7.3□□□□□ -1.24
GPNMB-207ENST00000468723 GNEQ9Y223 722 aaKnown RBP7.3□□□□□ -1.24
GPNMB-207ENST00000468723 SMNDC1O75940 238 aaKnown RBP eCLIP7.29□□□□□ -1.24
GPNMB-207ENST00000468723 POLR3DP05423 398 aaPredicted RBP7.29□□□□□ -1.24
GPNMB-207ENST00000468723 ADAMTSL4Q6UY14 1074 aa7.29□□□□□ -1.24
GPNMB-207ENST00000468723 ILDR2Q71H61 639 aa7.29□□□□□ -1.24
GPNMB-207ENST00000468723 FMR1NBQ8N0W7 255 aaPredicted RBP7.29□□□□□ -1.24
GPNMB-207ENST00000468723 SNX29Q8TEQ0 813 aa7.29□□□□□ -1.24
GPNMB-207ENST00000468723 PMEPA1Q969W9 287 aa7.29□□□□□ -1.24
GPNMB-207ENST00000468723 PBX4Q9BYU1 374 aa7.29□□□□□ -1.24
GPNMB-207ENST00000468723 IVNS1ABPQ9Y6Y0 642 aa7.29□□□□□ -1.24
GPNMB-207ENST00000468723 PROCP04070 461 aa7.28□□□□□ -1.24
GPNMB-207ENST00000468723 TXNDC11Q6PKC3 985 aa7.28□□□□□ -1.24
GPNMB-207ENST00000468723 HHIPQ96QV1 700 aa7.28□□□□□ -1.24
GPNMB-207ENST00000468723 POP1Q99575 1024 aaKnown RBP7.28□□□□□ -1.24
GPNMB-207ENST00000468723 LINC01387J3KSC0 135 aa7.27□□□□□ -1.25
GPNMB-207ENST00000468723 DEAF1O75398 565 aaPredicted RBP7.27□□□□□ -1.25
GPNMB-207ENST00000468723 IGHA1P01876 353 aa7.27□□□□□ -1.25
GPNMB-207ENST00000468723 ELNP15502 786 aa7.27□□□□□ -1.25
GPNMB-207ENST00000468723 SELPP16109 830 aa7.27□□□□□ -1.25
GPNMB-207ENST00000468723 TRAIPQ9BWF2 469 aa7.27□□□□□ -1.25
GPNMB-207ENST00000468723 ZFYVE28Q9HCC9 887 aa7.27□□□□□ -1.25
GPNMB-207ENST00000468723 SH2B1Q9NRF2 756 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms