RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 PRR29P0C7W0 189 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 HMGN5P82970 282 aaKnown RBP9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 PTK7Q13308 1070 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 LCA5Q86VQ0 697 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 ZNF710Q8N1W2 664 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 ATRIPQ8WXE1 791 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 RCAN3Q9UKA8 241 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 INPP5FQ9Y2H2 1132 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 NUP155O75694 1391 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 H3BRB1 525 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 ALDH1L1O75891 902 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 EPHB1P54762 984 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 C1orf216Q8TAB5 229 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 CENPTQ96BT3 561 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 NUDT16Q96DE0 195 aaKnown RBP9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 TUT1Q9H6E5 874 aaKnown RBP9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 EFCAB5A4FU69 1503 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 NLRP1Q9C000 1473 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 hCG_1984214I3L0E3 225 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 CDC45O75419 566 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 HCLS1P14317 486 aaPredicted RBP9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 ATP2B4P23634 1241 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 ZNF131P52739 623 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 FAM133BQ5BKY9 247 aaKnown RBP9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 ARL6IP6Q8N6S5 226 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 FANCLQ9NW38 375 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 DDX41Q9UJV9 622 aaKnown RBP9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 ICMTO60725 284 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 CCT2P78371 535 aaKnown RBP9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 ARHGAP4P98171 946 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 SLC10A5Q5PT55 438 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 TRMT2BQ96GJ1 504 aaKnown RBP9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 ZNF594Q96JF6 807 aaPredicted RBP9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 CHMP3Q9Y3E7 222 aa9.08□□□□□ -0.96
SPTBN1-204ENST00000467371 SPATA31E1Q6ZUB1 1445 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 CUL7Q14999 1698 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 SCGB1D2O95969 90 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 RPL17P18621 184 aaKnown RBP9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 TTF1Q15361 905 aaPredicted RBP9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 ARSHQ5FYA8 562 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 SPECC1Q5M775 1068 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 C16orf87Q6PH81 154 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 BRSK2Q8IWQ3 736 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 MAP3K14Q99558 947 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 XPO4Q9C0E2 1151 aaKnown RBP9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 CTTNBP2Q8WZ74 1663 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 GRIN2BQ13224 1484 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 GOLGA6L6A8MZA4 724 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 FIBPO43427 364 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 LETM1O95202 739 aaPredicted RBP9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 USP17L8P0C7I0 530 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 PAX7P23759 505 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 PTGDRQ13258 359 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 WDR45BQ5MNZ6 344 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 TSHZ3Q63HK5 1081 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 ZSCAN29Q8IWY8 852 aaPredicted RBP9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 OSCARQ8IYS5 282 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 CLASRPQ8N2M8 674 aaKnown RBP9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 KDM6BO15054 1643 aa9.07□□□□□ -0.96
SPTBN1-204ENST00000467371 NCAM1P13591 858 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 PDE3BQ13370 1112 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 ANKRD45Q5TZF3 282 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 ARHGEF25Q86VW2 580 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 RASEFQ8IZ41 740 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 TMC1Q8TDI8 760 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 POLR3CQ9BUI4 534 aaPredicted RBP9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 CCDC94Q9BW85 323 aaPredicted RBP9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 PTPN23Q9H3S7 1636 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 DYNC1I1O14576 645 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 KIF1CO43896 1103 aaKnown RBP9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 PPHLN1Q8NEY8 458 aaKnown RBP9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 SKA1Q96BD8 255 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 SLKQ9H2G2 1235 aaPredicted RBP9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 HOXC10Q9NYD6 342 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 CDV3Q9UKY7 258 aaKnown RBP9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 MCM4P33991 863 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 INHBEP58166 350 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 ZNF211Q13398 564 aaPredicted RBP9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 TUSC1Q2TAM9 212 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 ZCCHC8Q6NZY4 707 aaKnown RBP9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 CENPQQ7L2Z9 268 aaPredicted RBP9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 IQCF2Q8IXL9 164 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 GAS2L2Q8NHY3 880 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 FBXO41Q8TF61 875 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 FAM167BQ9BTA0 163 aa9.06□□□□□ -0.96
SPTBN1-204ENST00000467371 KIF7Q2M1P5 1343 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 ST20-MTHFSA0A0A6YYL1 179 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 GTPBP10A4D1E9 387 aaKnown RBP9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 HTATSF1O43719 755 aaKnown RBP9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 SLC4A8Q2Y0W8 1093 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 C11orf74Q86VG3 221 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 PPP1R9BQ96SB3 815 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 KCNQ2O43526 872 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 MCL1Q07820 350 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 NFXL1Q6ZNB6 911 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 TMC4Q7Z404 712 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 TTC8Q8TAM2 541 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms