RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 RNF43Q68DV7 783 aa9.37□□□□□ -0.91
XRN1-206ENST00000467077 DTX1Q86Y01 620 aa9.37□□□□□ -0.91
XRN1-206ENST00000467077 RGL4Q8IZJ4 473 aa9.37□□□□□ -0.91
XRN1-206ENST00000467077 CMTR1Q8N1G2 835 aaKnown RBP9.37□□□□□ -0.91
XRN1-206ENST00000467077 ARMC10Q8N2F6 343 aa9.37□□□□□ -0.91
XRN1-206ENST00000467077 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
XRN1-206ENST00000467077 MMP20O60882 483 aa9.36□□□□□ -0.91
XRN1-206ENST00000467077 TRIM42Q8IWZ5 723 aa9.36□□□□□ -0.91
XRN1-206ENST00000467077 USP20Q9Y2K6 914 aa9.36□□□□□ -0.91
XRN1-206ENST00000467077 FOXO3O43524 673 aa9.35□□□□□ -0.91
XRN1-206ENST00000467077 ADAMTS4O75173 837 aa9.35□□□□□ -0.91
XRN1-206ENST00000467077 HMX2A2RU54 273 aa9.34□□□□□ -0.91
XRN1-206ENST00000467077 WISP1O95388 367 aa9.34□□□□□ -0.91
XRN1-206ENST00000467077 HOXD8P13378 290 aaPredicted RBP9.34□□□□□ -0.91
XRN1-206ENST00000467077 CD68P34810 354 aaPredicted RBP9.34□□□□□ -0.91
XRN1-206ENST00000467077 DPYDQ12882 1025 aa9.34□□□□□ -0.91
XRN1-206ENST00000467077 MYO19Q96H55 970 aa9.34□□□□□ -0.91
XRN1-206ENST00000467077 LINC01387J3KSC0 135 aa9.33□□□□□ -0.92
XRN1-206ENST00000467077 UBTFP17480 764 aaKnown RBP9.33□□□□□ -0.92
XRN1-206ENST00000467077 MYRFLQ96LU7 910 aa9.33□□□□□ -0.92
XRN1-206ENST00000467077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.33□□□□□ -0.929e-14■■■■■ 108.7
XRN1-206ENST00000467077 SART1O43290 800 aaKnown RBP9.32□□□□□ -0.92
XRN1-206ENST00000467077 FAM117BQ6P1L5 589 aa9.32□□□□□ -0.92
XRN1-206ENST00000467077 GALNT11Q8NCW6 608 aa9.32□□□□□ -0.92
XRN1-206ENST00000467077 FAM46AQ96IP4 442 aaKnown RBP9.32□□□□□ -0.92
XRN1-206ENST00000467077 MAFBQ9Y5Q3 323 aaPredicted RBP9.32□□□□□ -0.92
XRN1-206ENST00000467077 PRR19A6NJB7 356 aa9.31□□□□□ -0.92
XRN1-206ENST00000467077 FAM177BA6PVY3 158 aa9.31□□□□□ -0.92
XRN1-206ENST00000467077 OPLAHO14841 1288 aa9.31□□□□□ -0.92
XRN1-206ENST00000467077 DUOXA2Q1HG44 320 aa9.31□□□□□ -0.92
XRN1-206ENST00000467077 TXNDC11Q6PKC3 985 aa9.31□□□□□ -0.92
XRN1-206ENST00000467077 TREML1Q86YW5 311 aa9.31□□□□□ -0.92
XRN1-206ENST00000467077 SHKBP1Q8TBC3 707 aa9.31□□□□□ -0.92
XRN1-206ENST00000467077 SPACA7Q96KW9 195 aa9.31□□□□□ -0.92
XRN1-206ENST00000467077 KCNF1Q9H3M0 494 aa9.31□□□□□ -0.92
XRN1-206ENST00000467077 ADGRE2Q9UHX3 823 aa9.31□□□□□ -0.92
XRN1-206ENST00000467077 ANGEL1Q9UNK9 670 aaKnown RBP9.31□□□□□ -0.92
XRN1-206ENST00000467077 SMNDC1O75940 238 aaKnown RBP eCLIP9.3□□□□□ -0.92
XRN1-206ENST00000467077 CRTC2Q53ET0 693 aaPredicted RBP9.3□□□□□ -0.92
XRN1-206ENST00000467077 LACRTQ9GZZ8 138 aa9.3□□□□□ -0.92
XRN1-206ENST00000467077 CDC27P30260 824 aa9.29□□□□□ -0.92
XRN1-206ENST00000467077 PTK7Q13308 1070 aa9.29□□□□□ -0.92
XRN1-206ENST00000467077 NLRP13Q86W25 1043 aa9.29□□□□□ -0.92
XRN1-206ENST00000467077 CLEC10AQ8IUN9 316 aa9.29□□□□□ -0.92
XRN1-206ENST00000467077 ANKMY2Q8IV38 441 aa9.29□□□□□ -0.92
XRN1-206ENST00000467077 TFIP11Q9UBB9 837 aaKnown RBP9.29□□□□□ -0.92
XRN1-206ENST00000467077 USP17L15C9J2P7 530 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 USP17L10C9JJH3 530 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 USP17L13C9JLJ4 530 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 USP17L12C9JPN9 530 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 USP17L11C9JVI0 530 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 USP17L21D6R901 530 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 USP17L18D6R9N7 530 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 USP17L22D6RA61 530 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 USP17L17D6RBQ6 530 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 USP17L19D6RCP7 530 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 USP17L20D6RJB6 530 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 JAG1P78504 1218 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 USP17L24Q0WX57 530 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 FAM20CQ8IXL6 584 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 KLHL23Q8NBE8 558 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 GIMAP7Q8NHV1 300 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 FAM83CQ9BQN1 747 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 CARD10Q9BWT7 1032 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 KCNMB2Q9Y691 235 aa9.28□□□□□ -0.92
XRN1-206ENST00000467077 CDC25BP30305 580 aa9.27□□□□□ -0.93
XRN1-206ENST00000467077 CEP135Q66GS9 1140 aa9.27□□□□□ -0.93
XRN1-206ENST00000467077 BEND4Q6ZU67 534 aa9.27□□□□□ -0.93
XRN1-206ENST00000467077 KCNK4Q9NYG8 393 aa9.27□□□□□ -0.93
XRN1-206ENST00000467077 FAM196BA6NMK8 535 aa9.26□□□□□ -0.93
XRN1-206ENST00000467077 HYAL2Q12891 473 aa9.26□□□□□ -0.93
XRN1-206ENST00000467077 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.26□□□□□ -0.93
XRN1-206ENST00000467077 KIAA1211Q6ZU35 1233 aa9.26□□□□□ -0.93
XRN1-206ENST00000467077 FSCN2O14926 492 aa9.25□□□□□ -0.93
XRN1-206ENST00000467077 BMP3P12645 472 aa9.25□□□□□ -0.93
XRN1-206ENST00000467077 WEE1P30291 646 aa9.25□□□□□ -0.93
XRN1-206ENST00000467077 ATP11AP98196 1134 aa9.25□□□□□ -0.93
XRN1-206ENST00000467077 ANKRD34AQ69YU3 496 aa9.25□□□□□ -0.93
XRN1-206ENST00000467077 OGFOD2Q6N063 350 aa9.25□□□□□ -0.93
XRN1-206ENST00000467077 ABI1Q8IZP0 508 aa9.25□□□□□ -0.93
XRN1-206ENST00000467077 LRFN2Q9ULH4 789 aa9.25□□□□□ -0.93
XRN1-206ENST00000467077 HIF3AQ9Y2N7 669 aa9.25□□□□□ -0.93
XRN1-206ENST00000467077 WDR64B1ANS9 1081 aa9.24□□□□□ -0.93
XRN1-206ENST00000467077 UBASH3BQ8TF42 649 aa9.24□□□□□ -0.93
XRN1-206ENST00000467077 GLMNQ92990 594 aa9.24□□□□□ -0.93
XRN1-206ENST00000467077 PIM2Q9P1W9 311 aa9.24□□□□□ -0.93
XRN1-206ENST00000467077 GAS2O43903 313 aaKnown RBP9.23□□□□□ -0.93
XRN1-206ENST00000467077 FLIIQ13045 1269 aa9.23□□□□□ -0.93
XRN1-206ENST00000467077 FDX2Q6P4F2 183 aa9.23□□□□□ -0.93
XRN1-206ENST00000467077 OR13H1Q8NG92 308 aa9.23□□□□□ -0.93
XRN1-206ENST00000467077 SEC31BQ9NQW1 1179 aa9.23□□□□□ -0.93
XRN1-206ENST00000467077 UBAP1LF5GYI3 381 aa9.22□□□□□ -0.93
XRN1-206ENST00000467077 SCNN1AP37088 669 aa9.22□□□□□ -0.93
XRN1-206ENST00000467077 ATG3Q9NT62 314 aa9.22□□□□□ -0.93
XRN1-206ENST00000467077 PREPP48147 710 aa9.21□□□□□ -0.94
XRN1-206ENST00000467077 TRIP4Q15650 581 aaPredicted RBP9.21□□□□□ -0.94
XRN1-206ENST00000467077 FOXD4L4Q8WXT5 416 aaPredicted RBP9.21□□□□□ -0.94
XRN1-206ENST00000467077 ASIC4Q96FT7 647 aa9.21□□□□□ -0.94
XRN1-206ENST00000467077 MFSD14AQ96MC6 490 aa9.21□□□□□ -0.94
XRN1-206ENST00000467077 RNF208Q9H0X6 261 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms