RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 SCN7AQ01118 1682 aa8.97□□□□□ -0.97
CLDN4-204ENST00000466411 SPTBN5Q9NRC6 3674 aaKnown RBP8.96□□□□□ -0.97
CLDN4-204ENST00000466411 STARD3NLO95772 234 aa8.96□□□□□ -0.98
CLDN4-204ENST00000466411 HOXB7P09629 217 aa8.96□□□□□ -0.98
CLDN4-204ENST00000466411 CCDC184Q52MB2 194 aa8.96□□□□□ -0.98
CLDN4-204ENST00000466411 INTS3Q68E01 1043 aaKnown RBP8.96□□□□□ -0.98
CLDN4-204ENST00000466411 MCM10Q7L590 875 aa8.96□□□□□ -0.98
CLDN4-204ENST00000466411 CNBD1Q8NA66 436 aa8.96□□□□□ -0.98
CLDN4-204ENST00000466411 LGR6Q9HBX8 967 aa8.96□□□□□ -0.98
CLDN4-204ENST00000466411 HDAC9Q9UKV0 1011 aa8.96□□□□□ -0.98
CLDN4-204ENST00000466411 HEG1Q9ULI3 1381 aa8.96□□□□□ -0.98
CLDN4-204ENST00000466411 CACNA1FO60840 1977 aa8.95□□□□□ -0.98
CLDN4-204ENST00000466411 GPR25O00155 361 aa8.95□□□□□ -0.98
CLDN4-204ENST00000466411 TBC1D8O95759 1140 aa8.95□□□□□ -0.98
CLDN4-204ENST00000466411 ZNF157P51786 506 aaPredicted RBP8.95□□□□□ -0.98
CLDN4-204ENST00000466411 MKRN3Q13064 507 aaKnown RBP8.95□□□□□ -0.98
CLDN4-204ENST00000466411 NEUROD2Q15784 382 aa8.95□□□□□ -0.98
CLDN4-204ENST00000466411 NPM2Q86SE8 214 aaKnown RBP8.95□□□□□ -0.98
CLDN4-204ENST00000466411 USP48Q86UV5 1035 aa8.95□□□□□ -0.98
CLDN4-204ENST00000466411 TRPM4Q8TD43 1214 aa8.95□□□□□ -0.98
CLDN4-204ENST00000466411 MYH16Q9H6N6 1097 aa8.95□□□□□ -0.98
CLDN4-204ENST00000466411 GBA2Q9HCG7 927 aaPredicted RBP8.95□□□□□ -0.98
CLDN4-204ENST00000466411 TSPYL4Q9UJ04 414 aa8.95□□□□□ -0.98
CLDN4-204ENST00000466411 TRIM35Q9UPQ4 493 aa8.95□□□□□ -0.98
CLDN4-204ENST00000466411 SNRPA1P09661 255 aaKnown RBP8.94□□□□□ -0.98
CLDN4-204ENST00000466411 CXCL9Q07325 125 aa8.94□□□□□ -0.98
CLDN4-204ENST00000466411 SLC51AQ86UW1 340 aa8.94□□□□□ -0.98
CLDN4-204ENST00000466411 WWC1Q8IX03 1113 aa8.94□□□□□ -0.98
CLDN4-204ENST00000466411 R3HDMLQ9H3Y0 253 aa8.94□□□□□ -0.98
CLDN4-204ENST00000466411 ERBB4Q15303 1308 aa8.94□□□□□ -0.98
CLDN4-204ENST00000466411 CHL1O00533 1208 aa8.93□□□□□ -0.98
CLDN4-204ENST00000466411 SOX1O00570 391 aaPredicted RBP8.93□□□□□ -0.98
CLDN4-204ENST00000466411 CAMTA2O94983 1202 aa8.93□□□□□ -0.98
CLDN4-204ENST00000466411 CANXP27824 592 aaKnown RBP8.93□□□□□ -0.98
CLDN4-204ENST00000466411 CLCN6P51797 869 aa8.93□□□□□ -0.98
CLDN4-204ENST00000466411 SLC39A6Q13433 755 aa8.93□□□□□ -0.98
CLDN4-204ENST00000466411 SETDB2Q96T68 719 aa8.93□□□□□ -0.98
CLDN4-204ENST00000466411 CFHR5Q9BXR6 569 aa8.93□□□□□ -0.98
CLDN4-204ENST00000466411 PRDM6Q9NQX0 595 aa8.93□□□□□ -0.98
CLDN4-204ENST00000466411 TBC1D2BQ9UPU7 963 aa8.93□□□□□ -0.98
CLDN4-204ENST00000466411 RRP7AQ9Y3A4 280 aaKnown RBP8.93□□□□□ -0.98
CLDN4-204ENST00000466411 A0A087WZG4 1122 aa8.92□□□□□ -0.98
CLDN4-204ENST00000466411 SHTN1A0MZ66 631 aa8.92□□□□□ -0.98
CLDN4-204ENST00000466411 E9PSI1 815 aa8.92□□□□□ -0.98
CLDN4-204ENST00000466411 GMPSP49915 693 aaPredicted RBP8.92□□□□□ -0.98
CLDN4-204ENST00000466411 ST5P78524 1137 aa8.92□□□□□ -0.98
CLDN4-204ENST00000466411 RASAL3Q86YV0 1011 aa8.92□□□□□ -0.98
CLDN4-204ENST00000466411 C2orf69Q8N8R5 385 aa8.92□□□□□ -0.98
CLDN4-204ENST00000466411 ARMC5Q96C12 935 aa8.92□□□□□ -0.98
CLDN4-204ENST00000466411 CDHR2Q9BYE9 1310 aa8.91□□□□□ -0.98
CLDN4-204ENST00000466411 CT47B1P0C2W7 299 aaPredicted RBP8.91□□□□□ -0.98
CLDN4-204ENST00000466411 ZNF853P0CG23 659 aa8.91□□□□□ -0.98
CLDN4-204ENST00000466411 TM4SF4P48230 202 aa8.91□□□□□ -0.98
CLDN4-204ENST00000466411 DCTN1Q14203 1278 aa8.91□□□□□ -0.98
CLDN4-204ENST00000466411 CC2D2BQ6DHV5 1058 aa8.91□□□□□ -0.98
CLDN4-204ENST00000466411 LARGE2Q8N3Y3 721 aa8.91□□□□□ -0.98
CLDN4-204ENST00000466411 ZNF428Q96B54 188 aa8.91□□□□□ -0.98
CLDN4-204ENST00000466411 ZNF496Q96IT1 587 aaPredicted RBP8.91□□□□□ -0.98
CLDN4-204ENST00000466411 MUC3AQ02505 3323 aa8.91□□□□□ -0.98
CLDN4-204ENST00000466411 ZBED9Q6R2W3 1325 aa8.9□□□□□ -0.98
CLDN4-204ENST00000466411 FKTNO75072 461 aa8.9□□□□□ -0.98
CLDN4-204ENST00000466411 ALDH1B1P30837 517 aa8.9□□□□□ -0.98
CLDN4-204ENST00000466411 ATN1P54259 1190 aaPredicted RBP8.9□□□□□ -0.98
CLDN4-204ENST00000466411 EIF4A1P60842 406 aaKnown RBP8.9□□□□□ -0.98
CLDN4-204ENST00000466411 CRY2Q49AN0 593 aa8.9□□□□□ -0.98
CLDN4-204ENST00000466411 POTEHQ6S545 545 aa8.9□□□□□ -0.98
CLDN4-204ENST00000466411 OTOP1Q7RTM1 612 aa8.9□□□□□ -0.98
CLDN4-204ENST00000466411 ZNF521Q96K83 1311 aa8.89□□□□□ -0.99
CLDN4-204ENST00000466411 ATMINO43313 823 aaPredicted RBP8.89□□□□□ -0.99
CLDN4-204ENST00000466411 EGFRP00533 1210 aa8.89□□□□□ -0.99
CLDN4-204ENST00000466411 IL6STP40189 918 aaPredicted RBP8.89□□□□□ -0.99
CLDN4-204ENST00000466411 NBR1Q14596 966 aa8.89□□□□□ -0.99
CLDN4-204ENST00000466411 LRCH3Q96II8 777 aa8.89□□□□□ -0.99
CLDN4-204ENST00000466411 MBIPQ9NS73 344 aa8.89□□□□□ -0.99
CLDN4-204ENST00000466411 LAS1LQ9Y4W2 734 aaKnown RBP8.89□□□□□ -0.99
CLDN4-204ENST00000466411 ADM5C9JUS6 153 aa8.88□□□□□ -0.99
CLDN4-204ENST00000466411 HNRNPUQ00839 825 aaKnown RBP eCLIP8.88□□□□□ -0.99
CLDN4-204ENST00000466411 CAP1Q01518 475 aa8.88□□□□□ -0.99
CLDN4-204ENST00000466411 ASTLQ6HA08 431 aaPredicted RBP8.88□□□□□ -0.99
CLDN4-204ENST00000466411 KRT26Q7Z3Y9 468 aa8.88□□□□□ -0.99
CLDN4-204ENST00000466411 NIM1KQ8IY84 436 aa8.88□□□□□ -0.99
CLDN4-204ENST00000466411 THUMPD2Q9BTF0 503 aaKnown RBP8.88□□□□□ -0.99
CLDN4-204ENST00000466411 DBF4Q9UBU7 674 aaPredicted RBP8.88□□□□□ -0.99
CLDN4-204ENST00000466411 CNOT7Q9UIV1 285 aaKnown RBP8.88□□□□□ -0.99
CLDN4-204ENST00000466411 ZNRF3Q9ULT6 936 aa8.88□□□□□ -0.99
CLDN4-204ENST00000466411 ZNF652Q9Y2D9 606 aa8.88□□□□□ -0.99
CLDN4-204ENST00000466411 FANCIQ9NVI1 1328 aa8.87□□□□□ -0.99
CLDN4-204ENST00000466411 TTC28Q96AY4 2481 aa8.87□□□□□ -0.99
CLDN4-204ENST00000466411 GABBR2O75899 941 aa8.87□□□□□ -0.99
CLDN4-204ENST00000466411 HOXA10P31260 410 aaPredicted RBP8.87□□□□□ -0.99
CLDN4-204ENST00000466411 GRIPAP1Q4V328 841 aa8.87□□□□□ -0.99
CLDN4-204ENST00000466411 CCDC30Q5VVM6 783 aa8.87□□□□□ -0.99
CLDN4-204ENST00000466411 NBPF5PQ86XG9 351 aaPredicted RBP8.87□□□□□ -0.99
CLDN4-204ENST00000466411 KCNV2Q8TDN2 545 aa8.87□□□□□ -0.99
CLDN4-204ENST00000466411 STK31Q9BXU1 1019 aa8.87□□□□□ -0.99
CLDN4-204ENST00000466411 VPS33BQ9H267 617 aa8.87□□□□□ -0.99
CLDN4-204ENST00000466411 STXBP5LQ9Y2K9 1186 aa8.87□□□□□ -0.99
CLDN4-204ENST00000466411 PTPN22Q9Y2R2 807 aa8.87□□□□□ -0.99
CLDN4-204ENST00000466411 AOC3Q16853 763 aa8.86□□□□□ -0.99
CLDN4-204ENST00000466411 HDGFL1Q5TGJ6 251 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms