RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 RTCBQ9Y3I0 505 aaKnown RBP8.65□□□□□ -1.02
LRCH3-211ENST00000466054 LGR5O75473 907 aa8.64□□□□□ -1.03
LRCH3-211ENST00000466054 IGFBP4P22692 258 aa8.64□□□□□ -1.03
LRCH3-211ENST00000466054 RNF43Q68DV7 783 aa8.64□□□□□ -1.03
LRCH3-211ENST00000466054 TRIM42Q8IWZ5 723 aa8.64□□□□□ -1.03
LRCH3-211ENST00000466054 ADAMTS4O75173 837 aa8.63□□□□□ -1.03
LRCH3-211ENST00000466054 DTX1Q86Y01 620 aa8.63□□□□□ -1.03
LRCH3-211ENST00000466054 RGL4Q8IZJ4 473 aa8.63□□□□□ -1.03
LRCH3-211ENST00000466054 UCN2Q96RP3 112 aa8.63□□□□□ -1.03
LRCH3-211ENST00000466054 TRIM33Q9UPN9 1127 aa8.63□□□□□ -1.03
LRCH3-211ENST00000466054 HMX2A2RU54 273 aa8.62□□□□□ -1.03
LRCH3-211ENST00000466054 POM121CA8CG34 1229 aa8.62□□□□□ -1.03
LRCH3-211ENST00000466054 SART1O43290 800 aaKnown RBP8.62□□□□□ -1.03
LRCH3-211ENST00000466054 DKK1O94907 266 aa8.62□□□□□ -1.03
LRCH3-211ENST00000466054 CD68P34810 354 aaPredicted RBP8.62□□□□□ -1.03
LRCH3-211ENST00000466054 C11orf91Q3C1V1 193 aa8.62□□□□□ -1.03
LRCH3-211ENST00000466054 ARMC10Q8N2F6 343 aa8.62□□□□□ -1.03
LRCH3-211ENST00000466054 KCNF1Q9H3M0 494 aa8.62□□□□□ -1.03
LRCH3-211ENST00000466054 USP20Q9Y2K6 914 aa8.62□□□□□ -1.03
LRCH3-211ENST00000466054 LINC01387J3KSC0 135 aa8.61□□□□□ -1.03
LRCH3-211ENST00000466054 CLUAP1Q96AJ1 413 aa8.61□□□□□ -1.03
LRCH3-211ENST00000466054 POM121Q96HA1 1249 aa8.61□□□□□ -1.03
LRCH3-211ENST00000466054 ANGEL1Q9UNK9 670 aaKnown RBP8.61□□□□□ -1.03
LRCH3-211ENST00000466054 FAM177BA6PVY3 158 aa8.6□□□□□ -1.03
LRCH3-211ENST00000466054 MMP20O60882 483 aa8.6□□□□□ -1.03
LRCH3-211ENST00000466054 EGFRP00533 1210 aa8.6□□□□□ -1.03
LRCH3-211ENST00000466054 FAM117BQ6P1L5 589 aa8.6□□□□□ -1.03
LRCH3-211ENST00000466054 ADAMTS19Q8TE59 1207 aa8.6□□□□□ -1.03
LRCH3-211ENST00000466054 CDC25BP30305 580 aa8.59□□□□□ -1.03
LRCH3-211ENST00000466054 SOX18P35713 384 aa8.59□□□□□ -1.03
LRCH3-211ENST00000466054 DUOXA2Q1HG44 320 aa8.59□□□□□ -1.03
LRCH3-211ENST00000466054 SHKBP1Q8TBC3 707 aa8.59□□□□□ -1.03
LRCH3-211ENST00000466054 SPACA7Q96KW9 195 aa8.59□□□□□ -1.03
LRCH3-211ENST00000466054 MYRFLQ96LU7 910 aa8.59□□□□□ -1.03
LRCH3-211ENST00000466054 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.59□□□□□ -1.03
LRCH3-211ENST00000466054 WISP1O95388 367 aa8.58□□□□□ -1.04
LRCH3-211ENST00000466054 TXNDC11Q6PKC3 985 aa8.58□□□□□ -1.04
LRCH3-211ENST00000466054 PROSER2Q86WR7 435 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-211ENST00000466054 GALNT11Q8NCW6 608 aa8.58□□□□□ -1.04
LRCH3-211ENST00000466054 GIMAP7Q8NHV1 300 aa8.58□□□□□ -1.04
LRCH3-211ENST00000466054 LACRTQ9GZZ8 138 aa8.58□□□□□ -1.04
LRCH3-211ENST00000466054 QTRT2Q9H974 415 aaKnown RBP8.58□□□□□ -1.04
LRCH3-211ENST00000466054 ADGRE2Q9UHX3 823 aa8.58□□□□□ -1.04
LRCH3-211ENST00000466054 PRR19A6NJB7 356 aa8.57□□□□□ -1.04
LRCH3-211ENST00000466054 SMNDC1O75940 238 aaKnown RBP eCLIP8.57□□□□□ -1.04
LRCH3-211ENST00000466054 DPYDQ12882 1025 aa8.57□□□□□ -1.04
LRCH3-211ENST00000466054 CLEC10AQ8IUN9 316 aa8.57□□□□□ -1.04
LRCH3-211ENST00000466054 CARD10Q9BWT7 1032 aa8.57□□□□□ -1.04
LRCH3-211ENST00000466054 ARID1BQ8NFD5 2236 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-211ENST00000466054 OPLAHO14841 1288 aa8.56□□□□□ -1.04
LRCH3-211ENST00000466054 CDC27P30260 824 aa8.56□□□□□ -1.04
LRCH3-211ENST00000466054 CEP135Q66GS9 1140 aa8.56□□□□□ -1.04
LRCH3-211ENST00000466054 BEND4Q6ZU67 534 aa8.56□□□□□ -1.04
LRCH3-211ENST00000466054 TREML1Q86YW5 311 aa8.56□□□□□ -1.04
LRCH3-211ENST00000466054 FNBP4Q8N3X1 1017 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-211ENST00000466054 FAM46AQ96IP4 442 aaKnown RBP8.56□□□□□ -1.04
LRCH3-211ENST00000466054 WDR64B1ANS9 1081 aa8.55□□□□□ -1.04
LRCH3-211ENST00000466054 FOXO3O43524 673 aa8.55□□□□□ -1.04
LRCH3-211ENST00000466054 BMP3P12645 472 aa8.55□□□□□ -1.04
LRCH3-211ENST00000466054 JAG1P78504 1218 aa8.55□□□□□ -1.04
LRCH3-211ENST00000466054 FAM20CQ8IXL6 584 aa8.55□□□□□ -1.04
LRCH3-211ENST00000466054 FAM83CQ9BQN1 747 aa8.55□□□□□ -1.04
LRCH3-211ENST00000466054 HOXD8P13378 290 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-211ENST00000466054 OGFOD2Q6N063 350 aa8.54□□□□□ -1.04
LRCH3-211ENST00000466054 ABI1Q8IZP0 508 aa8.54□□□□□ -1.04
LRCH3-211ENST00000466054 KLHL23Q8NBE8 558 aa8.54□□□□□ -1.04
LRCH3-211ENST00000466054 MYO19Q96H55 970 aa8.54□□□□□ -1.04
LRCH3-211ENST00000466054 ATG3Q9NT62 314 aa8.54□□□□□ -1.04
LRCH3-211ENST00000466054 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
LRCH3-211ENST00000466054 HYAL2Q12891 473 aa8.53□□□□□ -1.04
LRCH3-211ENST00000466054 NLRP13Q86W25 1043 aa8.53□□□□□ -1.04
LRCH3-211ENST00000466054 ASIC4Q96FT7 647 aa8.53□□□□□ -1.04
LRCH3-211ENST00000466054 KCNK4Q9NYG8 393 aa8.53□□□□□ -1.04
LRCH3-211ENST00000466054 FSCN2O14926 492 aa8.52□□□□□ -1.05
LRCH3-211ENST00000466054 GAS2O43903 313 aaKnown RBP8.52□□□□□ -1.05
LRCH3-211ENST00000466054 CRTC2Q53ET0 693 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-211ENST00000466054 KIAA1211Q6ZU35 1233 aa8.52□□□□□ -1.05
LRCH3-211ENST00000466054 ANKMY2Q8IV38 441 aa8.52□□□□□ -1.05
LRCH3-211ENST00000466054 PIM2Q9P1W9 311 aa8.52□□□□□ -1.05
LRCH3-211ENST00000466054 LEMD3Q9Y2U8 911 aa8.52□□□□□ -1.05
LRCH3-211ENST00000466054 MAFBQ9Y5Q3 323 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-211ENST00000466054 SCNN1AP37088 669 aa8.51□□□□□ -1.05
LRCH3-211ENST00000466054 PTK7Q13308 1070 aa8.51□□□□□ -1.05
LRCH3-211ENST00000466054 ANKRD34AQ69YU3 496 aa8.51□□□□□ -1.05
LRCH3-211ENST00000466054 FDX2Q6P4F2 183 aa8.51□□□□□ -1.05
LRCH3-211ENST00000466054 KCNMB2Q9Y691 235 aa8.51□□□□□ -1.05
LRCH3-211ENST00000466054 ATP11AP98196 1134 aa8.5□□□□□ -1.05
LRCH3-211ENST00000466054 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.5□□□□□ -1.05
LRCH3-211ENST00000466054 UBASH3BQ8TF42 649 aa8.5□□□□□ -1.05
LRCH3-211ENST00000466054 MFSD14AQ96MC6 490 aa8.5□□□□□ -1.05
LRCH3-211ENST00000466054 HIF3AQ9Y2N7 669 aa8.5□□□□□ -1.05
LRCH3-211ENST00000466054 USP17L15C9J2P7 530 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 USP17L10C9JJH3 530 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 USP17L13C9JLJ4 530 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 USP17L12C9JPN9 530 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 USP17L11C9JVI0 530 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 USP17L21D6R901 530 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 USP17L18D6R9N7 530 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 USP17L22D6RA61 530 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 USP17L17D6RBQ6 530 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms