RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 ABTB2Q8N961 1025 aa13.53□□□□□ -0.24
TNRC6A-205ENST00000464539 PDRG1Q9NUG6 133 aa13.53□□□□□ -0.24
TNRC6A-205ENST00000464539 CWC15Q9P013 229 aaKnown RBP13.53□□□□□ -0.24
TNRC6A-205ENST00000464539 PNMA6AP0CW24 399 aaPredicted RBP13.52□□□□□ -0.25
TNRC6A-205ENST00000464539 CAMK4Q16566 473 aa13.52□□□□□ -0.25
TNRC6A-205ENST00000464539 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
TNRC6A-205ENST00000464539 CCDC83Q8IWF9 413 aa13.52□□□□□ -0.25
TNRC6A-205ENST00000464539 CNTROBQ8N137 903 aa13.52□□□□□ -0.25
TNRC6A-205ENST00000464539 ZSWIM6Q9HCJ5 1215 aa13.52□□□□□ -0.25
TNRC6A-205ENST00000464539 CYP46A1Q9Y6A2 500 aa13.52□□□□□ -0.25
TNRC6A-205ENST00000464539 VPS37CA5D8V6 355 aaPredicted RBP13.51□□□□□ -0.25
TNRC6A-205ENST00000464539 CCZ1BP86790 482 aa13.51□□□□□ -0.25
TNRC6A-205ENST00000464539 CCZ1P86791 482 aaPredicted RBP13.51□□□□□ -0.25
TNRC6A-205ENST00000464539 IQCB1Q15051 598 aa13.51□□□□□ -0.25
TNRC6A-205ENST00000464539 RUFY2Q8WXA3 655 aa13.51□□□□□ -0.25
TNRC6A-205ENST00000464539 CDCA7Q9BWT1 371 aaPredicted RBP13.51□□□□□ -0.25
TNRC6A-205ENST00000464539 SRRTQ9BXP5 876 aaKnown RBP13.51□□□□□ -0.25
TNRC6A-205ENST00000464539 RASSF4Q9H2L5 321 aa13.51□□□□□ -0.25
TNRC6A-205ENST00000464539 ACEP12821 1306 aa13.51□□□□□ -0.25
TNRC6A-205ENST00000464539 CCDC69A6NI79 296 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 CCP110O43303 1012 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 ZRANB2O95218 330 aaKnown RBP eCLIP13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 GCP02774 474 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 TNNT3P45378 269 aaPredicted RBP13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 PLA2G4AP47712 749 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 TMCO3Q6UWJ1 677 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 CKAP2LQ8IYA6 745 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 SPATA32Q96LK8 384 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 CABP1Q9NZU7 370 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 ERBB3P21860 1342 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 CASTP20810 708 aaKnown RBP13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 CLCN6P51797 869 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 SNW1Q13573 536 aaKnown RBP13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 TSHZ3Q63HK5 1081 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 CDK19Q9BWU1 502 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 UBXN6Q9BZV1 441 aa13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 ALDH8A1Q9H2A2 487 aaPredicted RBP13.5□□□□□ -0.25
TNRC6A-205ENST00000464539 DLG5Q8TDM6 1919 aa13.49□□□□□ -0.25
TNRC6A-205ENST00000464539 USP27XA6NNY8 438 aa13.49□□□□□ -0.25
TNRC6A-205ENST00000464539 NRDCO43847 1150 aa13.49□□□□□ -0.25
TNRC6A-205ENST00000464539 ANKRD1Q15327 319 aa13.49□□□□□ -0.25
TNRC6A-205ENST00000464539 MARCH10Q8NA82 808 aaPredicted RBP13.49□□□□□ -0.25
TNRC6A-205ENST00000464539 OSBPL5Q9H0X9 879 aaPredicted RBP13.49□□□□□ -0.25
TNRC6A-205ENST00000464539 DNAJC25Q9H1X3 360 aa13.49□□□□□ -0.25
TNRC6A-205ENST00000464539 PSD3Q9NYI0 1048 aa13.49□□□□□ -0.25
TNRC6A-205ENST00000464539 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.49□□□□□ -0.25
TNRC6A-205ENST00000464539 STX1AQ16623 288 aa13.48□□□□□ -0.25
TNRC6A-205ENST00000464539 TOM1L2Q6ZVM7 507 aa13.48□□□□□ -0.25
TNRC6A-205ENST00000464539 LEO1Q8WVC0 666 aaPredicted RBP13.48□□□□□ -0.25
TNRC6A-205ENST00000464539 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.48□□□□□ -0.25
TNRC6A-205ENST00000464539 TOPAZ1Q8N9V7 1692 aa13.48□□□□□ -0.25
TNRC6A-205ENST00000464539 SHANK3Q9BYB0 1731 aa13.48□□□□□ -0.25
TNRC6A-205ENST00000464539 PLEKHG3A1L390 1219 aa13.48□□□□□ -0.25
TNRC6A-205ENST00000464539 LARGE1O95461 756 aa13.48□□□□□ -0.25
TNRC6A-205ENST00000464539 ERCC6LQ2NKX8 1250 aa13.48□□□□□ -0.25
TNRC6A-205ENST00000464539 IL25Q9H293 177 aa13.48□□□□□ -0.25
TNRC6A-205ENST00000464539 ST7Q9NRC1 585 aa13.48□□□□□ -0.25
TNRC6A-205ENST00000464539 CCDC61Q9Y6R9 512 aa13.48□□□□□ -0.25
TNRC6A-205ENST00000464539 AKAP12Q02952 1782 aa13.47□□□□□ -0.25
TNRC6A-205ENST00000464539 PSMA5P28066 241 aa13.47□□□□□ -0.25
TNRC6A-205ENST00000464539 DCTN1Q14203 1278 aa13.47□□□□□ -0.25
TNRC6A-205ENST00000464539 SLC4A10Q6U841 1118 aa13.47□□□□□ -0.25
TNRC6A-205ENST00000464539 CCDC150Q8NCX0 1101 aa13.47□□□□□ -0.25
TNRC6A-205ENST00000464539 PI4K2BQ8TCG2 481 aa13.47□□□□□ -0.25
TNRC6A-205ENST00000464539 PNMA6EA0A0J9YXQ4 647 aa13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 BECN2A8MW95 431 aa13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 ME3Q16798 604 aa13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 ARHGAP29Q52LW3 1261 aa13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 IQUBQ8NA54 791 aa13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 SSH3Q8TE77 659 aa13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 UBXN4Q92575 508 aa13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 GTF3C6Q969F1 213 aa13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 AK7Q96M32 723 aa13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 GEMIN8Q9NWZ8 242 aaKnown RBP13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 EMILIN1Q9Y6C2 1016 aa13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 MAP2P11137 1827 aaKnown RBP13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 SOS1Q07889 1333 aaPredicted RBP13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 PHLPP2Q6ZVD8 1323 aa13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 USP42Q9H9J4 1324 aaKnown RBP13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 EDC4Q6P2E9 1401 aaKnown RBP13.46□□□□□ -0.25
TNRC6A-205ENST00000464539 ZKSCAN1P17029 563 aaPredicted RBP13.46□□□□□ -0.26
TNRC6A-205ENST00000464539 GOLGA5Q8TBA6 731 aa13.46□□□□□ -0.26
TNRC6A-205ENST00000464539 JAKMIP1Q96N16 626 aaKnown RBP13.46□□□□□ -0.26
TNRC6A-205ENST00000464539 ANO10Q9NW15 660 aa13.46□□□□□ -0.26
TNRC6A-205ENST00000464539 TRMT1Q9NXH9 659 aaKnown RBP13.46□□□□□ -0.26
TNRC6A-205ENST00000464539 ORC3Q9UBD5 711 aaPredicted RBP13.46□□□□□ -0.26
TNRC6A-205ENST00000464539 CFAP45Q9UL16 551 aa13.46□□□□□ -0.26
TNRC6A-205ENST00000464539 NR1I2O75469 434 aa13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 CASQ1P31415 396 aa13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 NOP2P46087 812 aaKnown RBP13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 CCDC158Q5M9N0 1113 aa13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 KRBA2Q6ZNG9 492 aa13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 TEX2Q8IWB9 1127 aa13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 GOLGA6L1Q8N7Z2 621 aa13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 BICD2Q8TD16 824 aa13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 NAT10Q9H0A0 1025 aaKnown RBP13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 ZSCAN16Q9H4T2 348 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms