RNA–Protein interactions for RNA: ENST00000464029.5

SYPL1-204, Transcript of synaptophysin like 1, humanhuman

TSL 2

Gene SYPL1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-204ENST00000464029 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
SYPL1-204ENST00000464029 URB2Q14146 1524 aaKnown RBP9.25□□□□□ -0.93
SYPL1-204ENST00000464029 EEA1Q15075 1411 aa9.24□□□□□ -0.93
SYPL1-204ENST00000464029 LOC105371045A0A1W2PR82 267 aa9.24□□□□□ -0.93
SYPL1-204ENST00000464029 EIF2AK2P19525 551 aaKnown RBP9.24□□□□□ -0.93
SYPL1-204ENST00000464029 TMEM130Q8N3G9 435 aa9.24□□□□□ -0.93
SYPL1-204ENST00000464029 AKTIPQ9H8T0 292 aa9.24□□□□□ -0.93
SYPL1-204ENST00000464029 LRFN2Q9ULH4 789 aa9.24□□□□□ -0.93
SYPL1-204ENST00000464029 PLD4Q96BZ4 506 aa9.23□□□□□ -0.93
SYPL1-204ENST00000464029 CALR3Q96L12 384 aaKnown RBP9.23□□□□□ -0.93
SYPL1-204ENST00000464029 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
SYPL1-204ENST00000464029 USP20Q9Y2K6 914 aa9.23□□□□□ -0.93
SYPL1-204ENST00000464029 LOC102724428A0A0B4J2F2 783 aa9.22□□□□□ -0.93
SYPL1-204ENST00000464029 SIK1P57059 783 aa9.22□□□□□ -0.93
SYPL1-204ENST00000464029 VTI1AQ96AJ9 217 aa9.22□□□□□ -0.93
SYPL1-204ENST00000464029 CFTRP13569 1480 aa9.21□□□□□ -0.93
SYPL1-204ENST00000464029 J3QW42 95 aa9.21□□□□□ -0.94
SYPL1-204ENST00000464029 XYLBO75191 536 aa9.21□□□□□ -0.94
SYPL1-204ENST00000464029 ALX3O95076 343 aa9.21□□□□□ -0.94
SYPL1-204ENST00000464029 HOXD8P13378 290 aaPredicted RBP9.21□□□□□ -0.94
SYPL1-204ENST00000464029 LMOD1P29536 600 aaPredicted RBP9.21□□□□□ -0.94
SYPL1-204ENST00000464029 SRA1Q9HD15 236 aaKnown RBP9.21□□□□□ -0.94
SYPL1-204ENST00000464029 F8W735 103 aaPredicted RBP9.2□□□□□ -0.94
SYPL1-204ENST00000464029 FSTP19883 344 aa9.2□□□□□ -0.94
SYPL1-204ENST00000464029 SOX18P35713 384 aa9.2□□□□□ -0.94
SYPL1-204ENST00000464029 TREML1Q86YW5 311 aa9.2□□□□□ -0.94
SYPL1-204ENST00000464029 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.2□□□□□ -0.94
SYPL1-204ENST00000464029 KCNMB2Q9Y691 235 aa9.2□□□□□ -0.94
SYPL1-204ENST00000464029 MMP20O60882 483 aa9.19□□□□□ -0.94
SYPL1-204ENST00000464029 PSAPP07602 524 aa9.19□□□□□ -0.94
SYPL1-204ENST00000464029 SETDB1Q15047 1291 aa9.19□□□□□ -0.94
SYPL1-204ENST00000464029 Q6ZS46 218 aa9.19□□□□□ -0.94
SYPL1-204ENST00000464029 KRTAP19-1Q8IUB9 90 aa9.19□□□□□ -0.94
SYPL1-204ENST00000464029 RGL4Q8IZJ4 473 aa9.19□□□□□ -0.94
SYPL1-204ENST00000464029 CMTR1Q8N1G2 835 aaKnown RBP9.19□□□□□ -0.94
SYPL1-204ENST00000464029 IL22RA1Q8N6P7 574 aa9.19□□□□□ -0.94
SYPL1-204ENST00000464029 WRNQ14191 1432 aaPredicted RBP eCLIP9.19□□□□□ -0.94
SYPL1-204ENST00000464029 TOP2AP11388 1531 aaKnown RBP9.19□□□□□ -0.94
SYPL1-204ENST00000464029 RIMBP3CA6NJZ7 1639 aa9.19□□□□□ -0.94
SYPL1-204ENST00000464029 RIMBP3BA6NNM3 1639 aa9.19□□□□□ -0.94
SYPL1-204ENST00000464029 RIMBP3Q9UFD9 1639 aa9.19□□□□□ -0.94
SYPL1-204ENST00000464029 GHRHP01286 108 aa9.18□□□□□ -0.94
SYPL1-204ENST00000464029 GDF6Q6KF10 455 aaPredicted RBP9.18□□□□□ -0.94
SYPL1-204ENST00000464029 MAP4K3Q8IVH8 894 aa9.18□□□□□ -0.94
SYPL1-204ENST00000464029 DCAF11Q8TEB1 546 aa9.18□□□□□ -0.94
SYPL1-204ENST00000464029 ZNF608Q9ULD9 1512 aaPredicted RBP9.18□□□□□ -0.94
SYPL1-204ENST00000464029 NSUN5Q96P11 429 aaKnown RBP9.17□□□□□ -0.94
SYPL1-204ENST00000464029 PCMTD2Q9NV79 361 aa9.17□□□□□ -0.94
SYPL1-204ENST00000464029 GTF3C3Q9Y5Q9 886 aa9.17□□□□□ -0.94
SYPL1-204ENST00000464029 COX20Q5RI15 118 aa9.16□□□□□ -0.94
SYPL1-204ENST00000464029 MCTP1Q6DN14 999 aa9.16□□□□□ -0.94
SYPL1-204ENST00000464029 FAM200AQ8TCP9 573 aa9.16□□□□□ -0.94
SYPL1-204ENST00000464029 RBSNQ9H1K0 784 aa9.16□□□□□ -0.94
SYPL1-204ENST00000464029 CD97P48960 835 aa9.15□□□□□ -0.94
SYPL1-204ENST00000464029 CACTIN-AS1Q8N1I8 211 aa9.15□□□□□ -0.94
SYPL1-204ENST00000464029 A6NJR5 290 aa9.14□□□□□ -0.95
SYPL1-204ENST00000464029 FKBP5Q13451 457 aaPredicted RBP9.14□□□□□ -0.95
SYPL1-204ENST00000464029 MUC3BQ9H195 1237 aa9.14□□□□□ -0.95
SYPL1-204ENST00000464029 GOLGA2P5Q9HBQ8 144 aa9.14□□□□□ -0.95
SYPL1-204ENST00000464029 TRIM33Q9UPN9 1127 aa9.14□□□□□ -0.95
SYPL1-204ENST00000464029 ARHGEF11O15085 1522 aa9.14□□□□□ -0.95
SYPL1-204ENST00000464029 COL17A1Q9UMD9 1497 aaPredicted RBP9.14□□□□□ -0.95
SYPL1-204ENST00000464029 SSTR4P31391 388 aa9.13□□□□□ -0.95
SYPL1-204ENST00000464029 CFAP70Q5T0N1 1121 aa9.13□□□□□ -0.95
SYPL1-204ENST00000464029 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.13□□□□□ -0.95
SYPL1-204ENST00000464029 ETFBKMTQ8IXQ9 262 aa9.13□□□□□ -0.95
SYPL1-204ENST00000464029 AGGF1Q8N302 714 aaeCLIP9.13□□□□□ -0.95
SYPL1-204ENST00000464029 TRIP4Q15650 581 aaPredicted RBP9.12□□□□□ -0.95
SYPL1-204ENST00000464029 NLRP13Q86W25 1043 aa9.12□□□□□ -0.95
SYPL1-204ENST00000464029 RAXQ9Y2V3 346 aa9.12□□□□□ -0.95
SYPL1-204ENST00000464029 PPME1Q9Y570 386 aa9.12□□□□□ -0.95
SYPL1-204ENST00000464029 GSC2O15499 205 aa9.11□□□□□ -0.95
SYPL1-204ENST00000464029 GLB1P16278 677 aa9.11□□□□□ -0.95
SYPL1-204ENST00000464029 UBL7Q96S82 380 aaPredicted RBP9.11□□□□□ -0.95
SYPL1-204ENST00000464029 KRTAP9-9Q9BYP9 154 aa9.11□□□□□ -0.95
SYPL1-204ENST00000464029 KRTAP9-4Q9BYQ2 154 aa9.11□□□□□ -0.95
SYPL1-204ENST00000464029 EIF4G3O43432 1585 aaKnown RBP9.11□□□□□ -0.95
SYPL1-204ENST00000464029 PRDM2Q13029 1718 aa9.11□□□□□ -0.95
SYPL1-204ENST00000464029 TOPBP1Q92547 1522 aa9.1□□□□□ -0.95
SYPL1-204ENST00000464029 IFT140Q96RY7 1462 aa9.1□□□□□ -0.95
SYPL1-204ENST00000464029 GALNT11Q8NCW6 608 aa9.1□□□□□ -0.95
SYPL1-204ENST00000464029 KIAA1324LA8MWY0 1029 aaPredicted RBP9.09□□□□□ -0.95
SYPL1-204ENST00000464029 PTCD1O75127 700 aaKnown RBP9.09□□□□□ -0.95
SYPL1-204ENST00000464029 IGLV1-40P01703 118 aa9.09□□□□□ -0.95
SYPL1-204ENST00000464029 BRD2P25440 801 aaKnown RBP9.09□□□□□ -0.95
SYPL1-204ENST00000464029 SWI5Q1ZZU3 235 aa9.09□□□□□ -0.95
SYPL1-204ENST00000464029 OR13H1Q8NG92 308 aa9.09□□□□□ -0.95
SYPL1-204ENST00000464029 SAP130Q9H0E3 1048 aa9.09□□□□□ -0.95
SYPL1-204ENST00000464029 CCDC88BA6NC98 1476 aa9.08□□□□□ -0.96
SYPL1-204ENST00000464029 TM4SF5O14894 197 aa9.08□□□□□ -0.96
SYPL1-204ENST00000464029 MED26O95402 600 aa9.08□□□□□ -0.96
SYPL1-204ENST00000464029 OCLNQ16625 522 aa9.08□□□□□ -0.96
SYPL1-204ENST00000464029 FAM26DQ5JW98 314 aa9.08□□□□□ -0.96
SYPL1-204ENST00000464029 PRIMPOLQ96LW4 560 aa9.08□□□□□ -0.96
SYPL1-204ENST00000464029 STOML1Q9UBI4 398 aa9.08□□□□□ -0.96
SYPL1-204ENST00000464029 NOVA2Q9UNW9 492 aaKnown RBP9.08□□□□□ -0.96
SYPL1-204ENST00000464029 TNIKQ9UKE5 1360 aa9.08□□□□□ -0.96
SYPL1-204ENST00000464029 BTBD11A6QL63 1104 aa9.07□□□□□ -0.96
SYPL1-204ENST00000464029 LINC01387J3KSC0 135 aa9.07□□□□□ -0.96
SYPL1-204ENST00000464029 RFX1P22670 979 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms