RNA–Protein interactions for RNA: ENST00000464029.5

SYPL1-204, Transcript of synaptophysin like 1, humanhuman

TSL 2

Gene SYPL1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-204ENST00000464029 AEBP2Q6ZN18 517 aaPredicted RBP32.08■■■□□ 2.73
SYPL1-204ENST00000464029 CHIC1Q5VXU3 224 aa30.42■■■□□ 2.46
SYPL1-204ENST00000464029 SENP3Q9H4L4 574 aaPredicted RBP27.36■■□□□ 1.97
SYPL1-204ENST00000464029 PHF23Q9BUL5 403 aaPredicted RBP27■■□□□ 1.91
SYPL1-204ENST00000464029 FOXD1Q16676 465 aa25.5■■□□□ 1.67
SYPL1-204ENST00000464029 PLPPR3Q6T4P5 718 aa24.28■■□□□ 1.48
SYPL1-204ENST00000464029 MSH5O43196 834 aa23.89■■□□□ 1.41
SYPL1-204ENST00000464029 PPP6R1Q9UPN7 881 aa23.83■■□□□ 1.41
SYPL1-204ENST00000464029 PIAS4Q8N2W9 510 aaPredicted RBP23.8■■□□□ 1.4
SYPL1-204ENST00000464029 ADRA2BP18089 450 aa23.72■■□□□ 1.39
SYPL1-204ENST00000464029 POTEDQ86YR6 584 aa23.38■■□□□ 1.33
SYPL1-204ENST00000464029 MAPK8IP2Q13387 824 aaPredicted RBP21.81■■□□□ 1.08
SYPL1-204ENST00000464029 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
SYPL1-204ENST00000464029 DMRT2Q9Y5R5 561 aa21.7■■□□□ 1.06
SYPL1-204ENST00000464029 PPP4R3CPQ6ZMV5 832 aa21.27■■□□□ 1
SYPL1-204ENST00000464029 HOXD11P31277 338 aaPredicted RBP20.9■□□□□ 0.94
SYPL1-204ENST00000464029 CNKSR2Q8WXI2 1034 aa20.89■□□□□ 0.93
SYPL1-204ENST00000464029 DCAF8L1A6NGE4 600 aa20.74■□□□□ 0.91
SYPL1-204ENST00000464029 RNF216Q9NWF9 866 aaPredicted RBP20.72■□□□□ 0.91
SYPL1-204ENST00000464029 CACNB1Q02641 598 aaPredicted RBP20.49■□□□□ 0.87
SYPL1-204ENST00000464029 NCBP3Q53F19 620 aaKnown RBP20.42■□□□□ 0.86
SYPL1-204ENST00000464029 RNF39Q9H2S5 420 aa20.39■□□□□ 0.85
SYPL1-204ENST00000464029 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
SYPL1-204ENST00000464029 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
SYPL1-204ENST00000464029 C1QBPQ07021 282 aaKnown RBP20.09■□□□□ 0.81
SYPL1-204ENST00000464029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.86■□□□□ 0.77
SYPL1-204ENST00000464029 KCNA4P22459 653 aa19.71■□□□□ 0.75
SYPL1-204ENST00000464029 U3KPZ7 1027 aaPredicted RBP19.46■□□□□ 0.71
SYPL1-204ENST00000464029 SLC4A2P04920 1241 aa19.26■□□□□ 0.67
SYPL1-204ENST00000464029 SPINK5Q9NQ38 1064 aaPredicted RBP19.19■□□□□ 0.66
SYPL1-204ENST00000464029 CAPN15O75808 1086 aa19.12■□□□□ 0.65
SYPL1-204ENST00000464029 DSG3P32926 999 aa19.08■□□□□ 0.64
SYPL1-204ENST00000464029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.9■□□□□ 0.62
SYPL1-204ENST00000464029 APLP2Q06481 763 aa18.9■□□□□ 0.62
SYPL1-204ENST00000464029 HNRNPUL2Q1KMD3 747 aaKnown RBP18.9■□□□□ 0.62
SYPL1-204ENST00000464029 TRHP20396 242 aaPredicted RBP18.81■□□□□ 0.6
SYPL1-204ENST00000464029 ZNF219Q9P2Y4 722 aaPredicted RBP18.81■□□□□ 0.6
SYPL1-204ENST00000464029 SAMD1Q6SPF0 538 aaPredicted RBP18.78■□□□□ 0.6
SYPL1-204ENST00000464029 ABCB7O75027 752 aa18.67■□□□□ 0.58
SYPL1-204ENST00000464029 MYCNP04198 464 aaPredicted RBP18.63■□□□□ 0.57
SYPL1-204ENST00000464029 SLC4A1APQ9BWU0 796 aaKnown RBP18.58■□□□□ 0.56
SYPL1-204ENST00000464029 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
SYPL1-204ENST00000464029 POLA2Q14181 598 aa18.32■□□□□ 0.52
SYPL1-204ENST00000464029 POTEHQ6S545 545 aa18.31■□□□□ 0.52
SYPL1-204ENST00000464029 ATF5Q9Y2D1 282 aaPredicted RBP18.22■□□□□ 0.51
SYPL1-204ENST00000464029 RBM42Q9BTD8 480 aaKnown RBP18.19■□□□□ 0.5
SYPL1-204ENST00000464029 ZBTB22O15209 634 aa18.14■□□□□ 0.49
SYPL1-204ENST00000464029 ZBTB12Q9Y330 459 aaPredicted RBP17.95■□□□□ 0.46
SYPL1-204ENST00000464029 ATXN8OSP0DMR3 200 aa17.88■□□□□ 0.45
SYPL1-204ENST00000464029 CHRDL2Q6WN34 429 aa17.8■□□□□ 0.44
SYPL1-204ENST00000464029 AKT1S1Q96B36 256 aa17.77■□□□□ 0.44
SYPL1-204ENST00000464029 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
SYPL1-204ENST00000464029 REM2Q8IYK8 340 aaPredicted RBP17.6■□□□□ 0.41
SYPL1-204ENST00000464029 FBLN2P98095 1184 aa17.48■□□□□ 0.39
SYPL1-204ENST00000464029 SPDYE2BA6NHP3 402 aa17.4■□□□□ 0.38
SYPL1-204ENST00000464029 PITPNM1O00562 1244 aa17.4■□□□□ 0.38
SYPL1-204ENST00000464029 SPDYE6P0CI01 402 aa17.4■□□□□ 0.38
SYPL1-204ENST00000464029 SPDYE2Q495Y8 402 aa17.4■□□□□ 0.38
SYPL1-204ENST00000464029 MKRN4PQ13434 485 aaPredicted RBP17.37■□□□□ 0.37
SYPL1-204ENST00000464029 PIP4P2Q8N4L2 257 aa17.37■□□□□ 0.37
SYPL1-204ENST00000464029 FXR2P51116 673 aaKnown RBP eCLIP17.29■□□□□ 0.362e-6■□□□□ 9.5
SYPL1-204ENST00000464029 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
SYPL1-204ENST00000464029 SSUH2Q9Y2M2 353 aa17.18■□□□□ 0.34
SYPL1-204ENST00000464029 ZNF692Q9BU19 519 aaPredicted RBP17.17■□□□□ 0.34
SYPL1-204ENST00000464029 SP7Q8TDD2 431 aaPredicted RBP17.15■□□□□ 0.34
SYPL1-204ENST00000464029 SPDYE1Q8NFV5 336 aaPredicted RBP17.1■□□□□ 0.33
SYPL1-204ENST00000464029 HAX1O00165 279 aa17.05■□□□□ 0.32
SYPL1-204ENST00000464029 CLEC11AQ9Y240 323 aa17.04■□□□□ 0.32
SYPL1-204ENST00000464029 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
SYPL1-204ENST00000464029 PRKAR2AP13861 404 aaKnown RBP16.94■□□□□ 0.3
SYPL1-204ENST00000464029 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
SYPL1-204ENST00000464029 EVX2Q03828 476 aa16.86■□□□□ 0.29
SYPL1-204ENST00000464029 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
SYPL1-204ENST00000464029 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
SYPL1-204ENST00000464029 C19orf67A6NJJ6 358 aa16.73■□□□□ 0.27
SYPL1-204ENST00000464029 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
SYPL1-204ENST00000464029 FARP1Q9Y4F1 1045 aaPredicted RBP16.5■□□□□ 0.23
SYPL1-204ENST00000464029 GABBR2O75899 941 aa16.48■□□□□ 0.23
SYPL1-204ENST00000464029 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
SYPL1-204ENST00000464029 CD44P16070 742 aaKnown RBP16.4■□□□□ 0.22
SYPL1-204ENST00000464029 CREBZFQ9NS37 354 aa16.37■□□□□ 0.21
SYPL1-204ENST00000464029 CLCN6P51797 869 aa16.25■□□□□ 0.19
SYPL1-204ENST00000464029 ZNF579Q8NAF0 562 aaKnown RBP16.17■□□□□ 0.18
SYPL1-204ENST00000464029 PROM2Q8N271 834 aa16.16■□□□□ 0.18
SYPL1-204ENST00000464029 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
SYPL1-204ENST00000464029 POTEIP0CG38 1075 aa16.14■□□□□ 0.17
SYPL1-204ENST00000464029 MNX1P50219 401 aaPredicted RBP16.11■□□□□ 0.17
SYPL1-204ENST00000464029 LHX8Q68G74 356 aa16.09■□□□□ 0.17
SYPL1-204ENST00000464029 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
SYPL1-204ENST00000464029 PAK3O75914 559 aaPredicted RBP16.01■□□□□ 0.15
SYPL1-204ENST00000464029 DCBLD2Q96PD2 775 aa16■□□□□ 0.15
SYPL1-204ENST00000464029 GALR2O43603 387 aaPredicted RBP15.96■□□□□ 0.15
SYPL1-204ENST00000464029 PHF12Q96QT6 1004 aa15.93■□□□□ 0.14
SYPL1-204ENST00000464029 MIER1Q8N108 512 aa15.74■□□□□ 0.11
SYPL1-204ENST00000464029 TSPYL2Q9H2G4 693 aaPredicted RBP15.74■□□□□ 0.11
SYPL1-204ENST00000464029 PLEKHG5O94827 1062 aa15.73■□□□□ 0.11
SYPL1-204ENST00000464029 MS4A3Q96HJ5 214 aa15.72■□□□□ 0.11
SYPL1-204ENST00000464029 CCDC61Q9Y6R9 512 aa15.72■□□□□ 0.11
SYPL1-204ENST00000464029 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
SYPL1-204ENST00000464029 ASTLQ6HA08 431 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms