RNA–Protein interactions for RNA: ENST00000463875.6

GTDC1-212, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTDC1, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-212ENST00000463875 EYA3Q99504 573 aa9.25□□□□□ -0.93
GTDC1-212ENST00000463875 ZBTB48P10074 688 aaPredicted RBP9.24□□□□□ -0.93
GTDC1-212ENST00000463875 SP3Q02447 781 aa9.24□□□□□ -0.93
GTDC1-212ENST00000463875 GRAPQ13588 217 aa9.24□□□□□ -0.93
GTDC1-212ENST00000463875 MOB2Q70IA6 237 aa9.24□□□□□ -0.93
GTDC1-212ENST00000463875 DDX46Q7L014 1031 aaKnown RBP9.24□□□□□ -0.93
GTDC1-212ENST00000463875 GRAPLQ8TC17 118 aaPredicted RBP9.24□□□□□ -0.93
GTDC1-212ENST00000463875 DBNDD1Q9H9R9 158 aa9.24□□□□□ -0.93
GTDC1-212ENST00000463875 RTL9Q8NET4 1388 aa9.24□□□□□ -0.93
GTDC1-212ENST00000463875 ASTN2O75129 1339 aaPredicted RBP9.24□□□□□ -0.93
GTDC1-212ENST00000463875 ECE2O60344 883 aa9.24□□□□□ -0.93
GTDC1-212ENST00000463875 DIAPH1O60610 1272 aaKnown RBP9.24□□□□□ -0.93
GTDC1-212ENST00000463875 GPTP24298 496 aa9.24□□□□□ -0.93
GTDC1-212ENST00000463875 GIGYF2Q6Y7W6 1299 aaKnown RBP9.24□□□□□ -0.93
GTDC1-212ENST00000463875 NKX2-3Q8TAU0 364 aa9.24□□□□□ -0.93
GTDC1-212ENST00000463875 CD99L2Q8TCZ2 262 aa9.24□□□□□ -0.93
GTDC1-212ENST00000463875 UTP14AQ9BVJ6 771 aaKnown RBP9.24□□□□□ -0.93
GTDC1-212ENST00000463875 PRDM6Q9NQX0 595 aa9.24□□□□□ -0.93
GTDC1-212ENST00000463875 NUP98P52948 1817 aa9.23□□□□□ -0.93
GTDC1-212ENST00000463875 UNCXA6NJT0 531 aa9.23□□□□□ -0.93
GTDC1-212ENST00000463875 MKRN3Q13064 507 aaKnown RBP9.23□□□□□ -0.93
GTDC1-212ENST00000463875 LDLRAD1Q5T700 205 aa9.23□□□□□ -0.93
GTDC1-212ENST00000463875 DUOX1Q9NRD9 1551 aa9.23□□□□□ -0.93
GTDC1-212ENST00000463875 KDM3BQ7LBC6 1761 aa9.22□□□□□ -0.93
GTDC1-212ENST00000463875 HTTP42858 3142 aa9.22□□□□□ -0.93
GTDC1-212ENST00000463875 USP17L8P0C7I0 530 aa9.22□□□□□ -0.93
GTDC1-212ENST00000463875 PTPN12Q05209 780 aaKnown RBP9.22□□□□□ -0.93
GTDC1-212ENST00000463875 DDX60Q8IY21 1712 aaKnown RBP9.22□□□□□ -0.93
GTDC1-212ENST00000463875 PANK3Q9H999 370 aa9.22□□□□□ -0.93
GTDC1-212ENST00000463875 MYOZ2Q9NPC6 264 aa9.22□□□□□ -0.93
GTDC1-212ENST00000463875 NSFL1CQ9UNZ2 370 aaKnown RBP9.22□□□□□ -0.93
GTDC1-212ENST00000463875 C6orf229H3BNL8 230 aa9.21□□□□□ -0.93
GTDC1-212ENST00000463875 SOX1O00570 391 aaPredicted RBP9.21□□□□□ -0.93
GTDC1-212ENST00000463875 MMP14P50281 582 aa9.21□□□□□ -0.93
GTDC1-212ENST00000463875 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.21□□□□□ -0.93
GTDC1-212ENST00000463875 DEFB123Q8N688 67 aa9.21□□□□□ -0.93
GTDC1-212ENST00000463875 SLC10A4Q96EP9 437 aa9.21□□□□□ -0.93
GTDC1-212ENST00000463875 COL6A3P12111 3177 aa9.21□□□□□ -0.94
GTDC1-212ENST00000463875 IGF2BP3O00425 579 aaKnown RBP eCLIP9.2□□□□□ -0.94
GTDC1-212ENST00000463875 GNRH1P01148 92 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 CRHR2Q13324 411 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 RSBN1LQ6PCB5 846 aaPredicted RBP9.2□□□□□ -0.94
GTDC1-212ENST00000463875 NGEFQ8N5V2 710 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 LRCH3Q96II8 777 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 ZC3H12CQ9C0D7 883 aaKnown RBP9.2□□□□□ -0.94
GTDC1-212ENST00000463875 ZBTB3Q9H5J0 574 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 KCNQ5Q9NR82 932 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 KNSTRNQ9Y448 316 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 PTCH2Q9Y6C5 1203 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 ANKRD36CQ5JPF3 1778 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 LRRC37AA6NMS7 1700 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 WTIPA6NIX2 430 aaPredicted RBP9.2□□□□□ -0.94
GTDC1-212ENST00000463875 G3V3G9 751 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 RIMBP2O15034 1052 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 ZBTB7BO15156 539 aaPredicted RBP9.2□□□□□ -0.94
GTDC1-212ENST00000463875 CAPN2P17655 700 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 DOK7Q18PE1 504 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 DCAF8Q5TAQ9 597 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 TTLL7Q6ZT98 887 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 RTF1Q92541 710 aaKnown RBP9.2□□□□□ -0.94
GTDC1-212ENST00000463875 GMLQ99445 158 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 POLLQ9UGP5 575 aa9.2□□□□□ -0.94
GTDC1-212ENST00000463875 ERBB4Q15303 1308 aa9.19□□□□□ -0.94
GTDC1-212ENST00000463875 RANBP2P49792 3224 aaKnown RBP9.19□□□□□ -0.94
GTDC1-212ENST00000463875 PRMT2P55345 433 aa9.19□□□□□ -0.94
GTDC1-212ENST00000463875 MAP3K11Q16584 847 aa9.19□□□□□ -0.94
GTDC1-212ENST00000463875 UBE2Q1Q7Z7E8 422 aa9.19□□□□□ -0.94
GTDC1-212ENST00000463875 TESPA1A2RU30 521 aaPredicted RBP9.18□□□□□ -0.94
GTDC1-212ENST00000463875 BMP8BP34820 402 aa9.18□□□□□ -0.94
GTDC1-212ENST00000463875 PRAMEF18Q5VWM3 479 aa9.18□□□□□ -0.94
GTDC1-212ENST00000463875 OGFOD1Q8N543 542 aa9.18□□□□□ -0.94
GTDC1-212ENST00000463875 POLR3GLQ9BT43 218 aa9.18□□□□□ -0.94
GTDC1-212ENST00000463875 MTMR10Q9NXD2 777 aa9.18□□□□□ -0.94
GTDC1-212ENST00000463875 ANGEL1Q9UNK9 670 aaKnown RBP9.18□□□□□ -0.94
GTDC1-212ENST00000463875 LAMB1P07942 1786 aa9.18□□□□□ -0.94
GTDC1-212ENST00000463875 HTATSF1O43719 755 aaKnown RBP9.17□□□□□ -0.94
GTDC1-212ENST00000463875 LRIT3Q3SXY7 679 aa9.17□□□□□ -0.94
GTDC1-212ENST00000463875 HSP90AB3PQ58FF7 597 aa9.17□□□□□ -0.94
GTDC1-212ENST00000463875 APOBEC3FQ8IUX4 373 aaKnown RBP9.17□□□□□ -0.94
GTDC1-212ENST00000463875 TBC1D16Q8TBP0 767 aa9.17□□□□□ -0.94
GTDC1-212ENST00000463875 SHISA4Q96DD7 197 aa9.17□□□□□ -0.94
GTDC1-212ENST00000463875 WNK4Q96J92 1243 aa9.17□□□□□ -0.94
GTDC1-212ENST00000463875 PODXL2Q9NZ53 605 aa9.17□□□□□ -0.94
GTDC1-212ENST00000463875 RRP7AQ9Y3A4 280 aaKnown RBP9.17□□□□□ -0.94
GTDC1-212ENST00000463875 SH3TC1Q8TE82 1336 aa9.17□□□□□ -0.94
GTDC1-212ENST00000463875 LAMB4A4D0S4 1761 aa9.16□□□□□ -0.94
GTDC1-212ENST00000463875 PPP1R12BO60237 982 aaPredicted RBP9.16□□□□□ -0.94
GTDC1-212ENST00000463875 EVI5O60447 810 aa9.16□□□□□ -0.94
GTDC1-212ENST00000463875 HCLS1P14317 486 aaPredicted RBP9.16□□□□□ -0.94
GTDC1-212ENST00000463875 DSG3P32926 999 aa9.16□□□□□ -0.94
GTDC1-212ENST00000463875 GJA8P48165 433 aa9.16□□□□□ -0.94
GTDC1-212ENST00000463875 GPSM2P81274 684 aa9.16□□□□□ -0.94
GTDC1-212ENST00000463875 KIF22Q14807 665 aa9.16□□□□□ -0.94
GTDC1-212ENST00000463875 TAF7Q15545 349 aaPredicted RBP9.16□□□□□ -0.94
GTDC1-212ENST00000463875 PODNQ7Z5L7 613 aa9.16□□□□□ -0.94
GTDC1-212ENST00000463875 PNISRQ8TF01 805 aaKnown RBP9.16□□□□□ -0.94
GTDC1-212ENST00000463875 ZNF646O15015 1829 aaPredicted RBP9.16□□□□□ -0.94
GTDC1-212ENST00000463875 COL1A1P02452 1464 aaPredicted RBP9.16□□□□□ -0.94
GTDC1-212ENST00000463875 USP17L3A6NCW0 530 aa9.16□□□□□ -0.94
GTDC1-212ENST00000463875 USP17L4A6NCW7 530 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms