RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 MICAL2O94851 1124 aa7.82□□□□□ -1.16
COPS3-204ENST00000462236 SNRPBP14678 240 aaKnown RBP7.82□□□□□ -1.16
COPS3-204ENST00000462236 USP5P45974 858 aa7.82□□□□□ -1.16
COPS3-204ENST00000462236 RANGAP1P46060 587 aaPredicted RBP7.82□□□□□ -1.16
COPS3-204ENST00000462236 EIF1AXP47813 144 aaKnown RBP7.82□□□□□ -1.16
COPS3-204ENST00000462236 MTMR3Q13615 1198 aa7.82□□□□□ -1.16
COPS3-204ENST00000462236 ETFBKMTQ8IXQ9 262 aa7.82□□□□□ -1.16
COPS3-204ENST00000462236 DMGDHQ9UI17 866 aaKnown RBP7.82□□□□□ -1.16
COPS3-204ENST00000462236 BCS1LQ9Y276 419 aa7.82□□□□□ -1.16
COPS3-204ENST00000462236 FAM135AQ9P2D6 1515 aa7.82□□□□□ -1.16
COPS3-204ENST00000462236 KIAA1107Q9UPP5 1409 aa7.81□□□□□ -1.16
COPS3-204ENST00000462236 SOBPA7XYQ1 873 aa7.81□□□□□ -1.16
COPS3-204ENST00000462236 LAMC2Q13753 1193 aa7.81□□□□□ -1.16
COPS3-204ENST00000462236 BTLAQ7Z6A9 289 aa7.81□□□□□ -1.16
COPS3-204ENST00000462236 TREML1Q86YW5 311 aa7.81□□□□□ -1.16
COPS3-204ENST00000462236 NPAS3Q8IXF0 933 aa7.81□□□□□ -1.16
COPS3-204ENST00000462236 RUBCNLQ9H714 662 aa7.81□□□□□ -1.16
COPS3-204ENST00000462236 GPAMQ9HCL2 828 aa7.81□□□□□ -1.16
COPS3-204ENST00000462236 RGS17Q9UGC6 210 aaPredicted RBP7.81□□□□□ -1.16
COPS3-204ENST00000462236 DCTN4Q9UJW0 460 aa7.81□□□□□ -1.16
COPS3-204ENST00000462236 GPATCH8Q9UKJ3 1502 aaKnown RBP7.81□□□□□ -1.16
COPS3-204ENST00000462236 CCDC18Q5T9S5 1454 aa7.81□□□□□ -1.16
COPS3-204ENST00000462236 NDUFB5O43674 189 aa7.8□□□□□ -1.16
COPS3-204ENST00000462236 EPB42P16452 691 aa7.8□□□□□ -1.16
COPS3-204ENST00000462236 ITGA6P23229 1130 aa7.8□□□□□ -1.16
COPS3-204ENST00000462236 MZF1P28698 734 aaPredicted RBP7.8□□□□□ -1.16
COPS3-204ENST00000462236 ZAP70P43403 619 aa7.8□□□□□ -1.16
COPS3-204ENST00000462236 ARSDP51689 593 aa7.8□□□□□ -1.16
COPS3-204ENST00000462236 MFAP1P55081 439 aaKnown RBP7.8□□□□□ -1.16
COPS3-204ENST00000462236 MARSP56192 900 aaKnown RBP7.8□□□□□ -1.16
COPS3-204ENST00000462236 LRRC69Q6ZNQ3 347 aa7.8□□□□□ -1.16
COPS3-204ENST00000462236 RIPOR1Q6ZS17 1223 aa7.8□□□□□ -1.16
COPS3-204ENST00000462236 NUCKS1Q9H1E3 243 aaKnown RBP7.8□□□□□ -1.16
COPS3-204ENST00000462236 CASKIN1Q8WXD9 1431 aa7.79□□□□□ -1.16
COPS3-204ENST00000462236 LRRC7Q96NW7 1537 aa7.79□□□□□ -1.16
COPS3-204ENST00000462236 FAM157BP0CG42 384 aa7.79□□□□□ -1.16
COPS3-204ENST00000462236 PCSK2P16519 638 aa7.79□□□□□ -1.16
COPS3-204ENST00000462236 KCNQ4P56696 695 aa7.79□□□□□ -1.16
COPS3-204ENST00000462236 ZNF280CQ8ND82 737 aa7.79□□□□□ -1.16
COPS3-204ENST00000462236 PIK3R5Q8WYR1 880 aa7.79□□□□□ -1.16
COPS3-204ENST00000462236 RBCK1Q9BYM8 510 aa7.79□□□□□ -1.16
COPS3-204ENST00000462236 BRPF3Q9ULD4 1205 aa7.79□□□□□ -1.16
COPS3-204ENST00000462236 PCDHGC4Q9Y5F7 938 aa7.79□□□□□ -1.16
COPS3-204ENST00000462236 PZPP20742 1482 aa7.79□□□□□ -1.16
COPS3-204ENST00000462236 ZBTB39O15060 712 aa7.78□□□□□ -1.16
COPS3-204ENST00000462236 FZD6O60353 706 aa7.78□□□□□ -1.16
COPS3-204ENST00000462236 INPP5BP32019 993 aa7.78□□□□□ -1.16
COPS3-204ENST00000462236 IDH3AP50213 366 aa7.78□□□□□ -1.16
COPS3-204ENST00000462236 PIP4K2BP78356 416 aa7.78□□□□□ -1.16
COPS3-204ENST00000462236 PDE3BQ13370 1112 aa7.78□□□□□ -1.16
COPS3-204ENST00000462236 FOXR1Q6PIV2 292 aa7.78□□□□□ -1.16
COPS3-204ENST00000462236 ZSCAN29Q8IWY8 852 aaPredicted RBP7.78□□□□□ -1.16
COPS3-204ENST00000462236 NANOS1Q8WY41 292 aaKnown RBP7.78□□□□□ -1.16
COPS3-204ENST00000462236 HSH2DQ96JZ2 352 aa7.78□□□□□ -1.16
COPS3-204ENST00000462236 ZCCHC2Q9C0B9 1178 aaKnown RBP7.78□□□□□ -1.16
COPS3-204ENST00000462236 PLEKHH2Q8IVE3 1493 aa7.78□□□□□ -1.16
COPS3-204ENST00000462236 SETD1AO15047 1707 aaKnown RBP7.78□□□□□ -1.16
COPS3-204ENST00000462236 SPAG9O60271 1321 aaKnown RBP7.78□□□□□ -1.16
COPS3-204ENST00000462236 OPLAHO14841 1288 aa7.77□□□□□ -1.17
COPS3-204ENST00000462236 ATXN7O15265 892 aaPredicted RBP7.77□□□□□ -1.17
COPS3-204ENST00000462236 PPFIA3O75145 1194 aa7.77□□□□□ -1.17
COPS3-204ENST00000462236 TYRO3Q06418 890 aa7.77□□□□□ -1.17
COPS3-204ENST00000462236 EHHADHQ08426 723 aa7.77□□□□□ -1.17
COPS3-204ENST00000462236 AAMPQ13685 434 aa7.77□□□□□ -1.17
COPS3-204ENST00000462236 DBN1Q16643 649 aa7.77□□□□□ -1.17
COPS3-204ENST00000462236 FAM26DQ5JW98 314 aa7.77□□□□□ -1.17
COPS3-204ENST00000462236 ASB16Q96NS5 453 aa7.77□□□□□ -1.17
COPS3-204ENST00000462236 CFHR5Q9BXR6 569 aa7.77□□□□□ -1.17
COPS3-204ENST00000462236 EFCC1Q9HA90 598 aa7.77□□□□□ -1.17
COPS3-204ENST00000462236 PHF24Q9UPV7 400 aa7.77□□□□□ -1.17
COPS3-204ENST00000462236 FNDC3AQ9Y2H6 1198 aaKnown RBP7.77□□□□□ -1.17
COPS3-204ENST00000462236 UGGT1Q9NYU2 1555 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 NLRP1Q9C000 1473 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 MBD5Q9P267 1494 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 UBR1Q8IWV7 1749 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 EFSO43281 561 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 MAPK1P28482 360 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 UBAP2LQ14157 1087 aaKnown RBP7.76□□□□□ -1.17
COPS3-204ENST00000462236 COL19A1Q14993 1142 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 RGL4Q8IZJ4 473 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 GJD3Q8N144 294 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 ZNF837Q96EG3 531 aaPredicted RBP7.76□□□□□ -1.17
COPS3-204ENST00000462236 DMRTB1Q96MA1 342 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 CEP63Q96MT8 703 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 NDFIP2Q9NV92 336 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 ATXN7L1Q9ULK2 861 aaPredicted RBP7.76□□□□□ -1.17
COPS3-204ENST00000462236 KDM5DQ9BY66 1539 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 RTEL1-TNFRSF6BF6WH68 1400 aa7.76□□□□□ -1.17
COPS3-204ENST00000462236 NPHP4O75161 1426 aaPredicted RBP7.76□□□□□ -1.17
COPS3-204ENST00000462236 TNRQ92752 1358 aa7.75□□□□□ -1.17
COPS3-204ENST00000462236 PDGFAP04085 211 aa7.75□□□□□ -1.17
COPS3-204ENST00000462236 THBS1P07996 1170 aa7.75□□□□□ -1.17
COPS3-204ENST00000462236 HNRNPMP52272 730 aaKnown RBP eCLIP7.75□□□□□ -1.17
COPS3-204ENST00000462236 DNAJC14Q6Y2X3 702 aaPredicted RBP7.75□□□□□ -1.17
COPS3-204ENST00000462236 KLRG1Q96E93 195 aa7.75□□□□□ -1.17
COPS3-204ENST00000462236 BRD7Q9NPI1 651 aa7.75□□□□□ -1.17
COPS3-204ENST00000462236 NXF1Q9UBU9 619 aaKnown RBP7.75□□□□□ -1.17
COPS3-204ENST00000462236 FYCO1Q9BQS8 1478 aa7.75□□□□□ -1.17
COPS3-204ENST00000462236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.74□□□□□ -1.17
COPS3-204ENST00000462236 EGFRP00533 1210 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms