RNA–Protein interactions for RNA: ENST00000461710.5

CDK5RAP1-207, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 2,650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-207ENST00000461710 ERBB3P21860 1342 aa13.5□□□□□ -0.25
CDK5RAP1-207ENST00000461710 PRAMEF22A3QJZ6 481 aa13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 BECN2A8MW95 431 aa13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 FILIP1Q7Z7B0 1213 aa13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 KRT222Q8N1A0 295 aa13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 ENGASEQ8NFI3 743 aa13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 ERO1AQ96HE7 468 aa13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 LLPHQ9BRT6 129 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 NCAPD2Q15021 1401 aa13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 NFAT5O94916 1531 aa13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 A0A087WWV3 80 aa13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 NAA16Q6N069 864 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 TRMT1Q9NXH9 659 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 EID1Q9Y6B2 187 aa13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 V9GYY5 206 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 LAMA4Q16363 1823 aa13.49□□□□□ -0.25
CDK5RAP1-207ENST00000461710 ZNF609O15014 1411 aa13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 CYP21A2P08686 494 aa13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 TAF3Q5VWG9 929 aa13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 FBXO38Q6PIJ6 1188 aa13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 CCDC73Q6ZRK6 1079 aa13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 NSUN7Q8NE18 718 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 ANO10Q9NW15 660 aa13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 PXDNQ92626 1479 aa13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 RNMTO43148 476 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 PFKFB2O60825 505 aa13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 TERF2Q15554 542 aa13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 ELF2Q15723 593 aa13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 SLFNL1Q499Z3 407 aa13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP1-207ENST00000461710 KINO60870 393 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 IGKV5-2P06315 115 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 ATP5JP18859 108 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 FAM160A1Q05DH4 1040 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 CCDC129Q6ZRS4 1044 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 USP28Q96RU2 1077 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 LRRC2Q9BYS8 371 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 RFX7Q2KHR2 1363 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 CTDNEP1O95476 244 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 C14orf37Q86TY3 774 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 CEP57L1Q8IYX8 460 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 AOPEPQ8N6M6 819 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 DBNLQ9UJU6 430 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 OVOS2A0A0G2JMS6 1433 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 SLU7O95391 586 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 DDX58O95786 925 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 CHGBP05060 677 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 PLEKHO1Q53GL0 409 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 STOX1Q6ZVD7 989 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 NBPF11Q86T75 865 aa13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 SEC62Q99442 399 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 OSBPL5Q9H0X9 879 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP1-207ENST00000461710 ARHGAP23Q9P227 1491 aa13.46□□□□□ -0.25
CDK5RAP1-207ENST00000461710 KIF2AO00139 706 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP1-207ENST00000461710 FOSBP53539 338 aa13.46□□□□□ -0.25
CDK5RAP1-207ENST00000461710 GSDMDP57764 484 aa13.46□□□□□ -0.25
CDK5RAP1-207ENST00000461710 ATL3Q6DD88 541 aa13.46□□□□□ -0.25
CDK5RAP1-207ENST00000461710 NDUFB9Q9Y6M9 179 aa13.46□□□□□ -0.25
CDK5RAP1-207ENST00000461710 SIPA1L3O60292 1781 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP1-207ENST00000461710 PTPDC1A2A3K4 754 aa13.46□□□□□ -0.26
CDK5RAP1-207ENST00000461710 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.26
CDK5RAP1-207ENST00000461710 PDIA6Q15084 440 aa13.46□□□□□ -0.26
CDK5RAP1-207ENST00000461710 EPHA10Q5JZY3 1008 aa13.46□□□□□ -0.26
CDK5RAP1-207ENST00000461710 LRRC59Q96AG4 307 aaKnown RBP13.46□□□□□ -0.26
CDK5RAP1-207ENST00000461710 DDX21Q9NR30 783 aaKnown RBP eCLIP13.46□□□□□ -0.26
CDK5RAP1-207ENST00000461710 FSIP1Q8NA03 581 aa13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 ERCC4Q92889 916 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 IMPACTQ9P2X3 320 aa13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 ABCC6O95255 1503 aa13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 SALL1Q9NSC2 1324 aa13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 MCMDC2Q4G0Z9 681 aa13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 TNNI3KQ59H18 835 aa13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 E4F1Q66K89 784 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 ILDR1Q86SU0 546 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 ZNF396Q96N95 335 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 NAT10Q9H0A0 1025 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 ZNF446Q9NWS9 450 aa13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 FPGT-TNNI3KV9GXZ4 949 aa13.45□□□□□ -0.26
CDK5RAP1-207ENST00000461710 FGD1P98174 961 aa13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 AMOTQ4VCS5 1084 aa13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 DHX32Q7L7V1 743 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 FMR1NBQ8N0W7 255 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 L2HGDHQ9H9P8 463 aa13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 COPRSQ9NQ92 184 aa13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 PHRF1Q9P1Y6 1649 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 NEURL1BA8MQ27 555 aa13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 HMGB1P09429 215 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 ME1P48163 572 aa13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 APOBRQ0VD83 1088 aa13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 AGXT2Q9BYV1 514 aa13.44□□□□□ -0.26
CDK5RAP1-207ENST00000461710 GCKRQ14397 625 aa13.43□□□□□ -0.26
CDK5RAP1-207ENST00000461710 RIC3Q7Z5B4 369 aa13.43□□□□□ -0.26
CDK5RAP1-207ENST00000461710 H2AFXP16104 143 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP1-207ENST00000461710 RFX5P48382 616 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP1-207ENST00000461710 TFCP2Q12800 502 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms