RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 RBM26Q5T8P6 1007 aaKnown RBP22.41■■□□□ 1.18
SNX27-204ENST00000458013 RHPN1Q8TCX5 695 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 BAG3O95817 575 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 ASIC1P78348 528 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 LZTFL1Q9NQ48 299 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 PKD2L1Q9P0L9 805 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 CCDC160A6NGH7 325 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 SYT1P21579 422 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 NUCB1Q02818 461 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 APOBRQ0VD83 1088 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 RTN1Q16799 776 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 TBC1D32Q96NH3 1257 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 RHOXF2BP0C7M4 288 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 UIMC1Q96RL1 719 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 RHOXF2Q9BQY4 288 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 NBPF6Q5VWK0 638 aa22.4■■□□□ 1.18
SNX27-204ENST00000458013 NBPF5PQ86XG9 351 aaPredicted RBP22.4■■□□□ 1.18
SNX27-204ENST00000458013 NBPF4Q96M43 638 aa22.4■■□□□ 1.18
SNX27-204ENST00000458013 CDC5LQ99459 802 aaKnown RBP22.4■■□□□ 1.18
SNX27-204ENST00000458013 DACT1Q9NYF0 836 aa22.4■■□□□ 1.18
SNX27-204ENST00000458013 SPECC1LQ69YQ0 1117 aa22.4■■□□□ 1.18
SNX27-204ENST00000458013 NEMFO60524 1076 aa22.4■■□□□ 1.18
SNX27-204ENST00000458013 PDIA4P13667 645 aaKnown RBP22.4■■□□□ 1.18
SNX27-204ENST00000458013 MNAT1P51948 309 aa22.4■■□□□ 1.18
SNX27-204ENST00000458013 NAPAP54920 295 aa22.4■■□□□ 1.18
SNX27-204ENST00000458013 HELBQ8NG08 1087 aaPredicted RBP22.4■■□□□ 1.18
SNX27-204ENST00000458013 IFT81Q8WYA0 676 aa22.4■■□□□ 1.18
SNX27-204ENST00000458013 CAMSAP2Q08AD1 1489 aa22.4■■□□□ 1.18
SNX27-204ENST00000458013 LMOD1P29536 600 aaPredicted RBP22.39■■□□□ 1.18
SNX27-204ENST00000458013 XAGE3Q8WTP9 111 aa22.39■■□□□ 1.18
SNX27-204ENST00000458013 PTPN23Q9H3S7 1636 aa22.39■■□□□ 1.18
SNX27-204ENST00000458013 NOLC1Q14978 699 aaKnown RBP eCLIP22.39■■□□□ 1.17
SNX27-204ENST00000458013 BMS1Q14692 1282 aaKnown RBP22.39■■□□□ 1.17
SNX27-204ENST00000458013 FBF1Q8TES7 1133 aa22.39■■□□□ 1.17
SNX27-204ENST00000458013 PPM1EQ8WY54 764 aa22.39■■□□□ 1.17
SNX27-204ENST00000458013 PABPN1LA6NDY0 278 aaKnown RBP22.39■■□□□ 1.17
SNX27-204ENST00000458013 RIMBP2O15034 1052 aa22.39■■□□□ 1.17
SNX27-204ENST00000458013 GRIPAP1Q4V328 841 aa22.39■■□□□ 1.17
SNX27-204ENST00000458013 ATRIPQ8WXE1 791 aa22.39■■□□□ 1.17
SNX27-204ENST00000458013 PIK3R4Q99570 1358 aa22.39■■□□□ 1.17
SNX27-204ENST00000458013 SPAG5Q96R06 1193 aa22.38■■□□□ 1.17
SNX27-204ENST00000458013 PCF11O94913 1555 aaKnown RBP22.38■■□□□ 1.17
SNX27-204ENST00000458013 CCDC155Q8N6L0 562 aa22.38■■□□□ 1.17
SNX27-204ENST00000458013 GUCA1BQ9UMX6 200 aa22.38■■□□□ 1.17
SNX27-204ENST00000458013 RTL1A6NKG5 1358 aa22.38■■□□□ 1.17
SNX27-204ENST00000458013 DDX23Q9BUQ8 820 aaKnown RBP22.38■■□□□ 1.17
SNX27-204ENST00000458013 ATP6V1AP38606 617 aa22.38■■□□□ 1.17
SNX27-204ENST00000458013 CCDC25Q86WR0 208 aa22.38■■□□□ 1.17
SNX27-204ENST00000458013 NOS1P29475 1434 aa22.38■■□□□ 1.17
SNX27-204ENST00000458013 STXBP4Q6ZWJ1 553 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 KIF4AO95239 1232 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 ST5P78524 1137 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.37■■□□□ 1.17
SNX27-204ENST00000458013 CTAGE15A4D2H0 777 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 CTAGE8P0CG41 777 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 BMP2KLQ5H9B9 411 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 CTAGE6Q86UF2 777 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 CTAGE4Q8IX94 777 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 VPS18Q9P253 973 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 ACTN2P35609 894 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 UBXN1Q04323 297 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 FAM160A1Q05DH4 1040 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 KANK3Q6NY19 840 aa22.37■■□□□ 1.17
SNX27-204ENST00000458013 MRRFQ96E11 262 aaKnown RBP22.37■■□□□ 1.17
SNX27-204ENST00000458013 PRIM1P49642 420 aaKnown RBP22.36■■□□□ 1.17
SNX27-204ENST00000458013 ANKRD13DQ6ZTN6 518 aa22.36■■□□□ 1.17
SNX27-204ENST00000458013 ZRANB1Q9UGI0 708 aa22.36■■□□□ 1.17
SNX27-204ENST00000458013 ABCC5O15440 1437 aa22.36■■□□□ 1.17
SNX27-204ENST00000458013 IFNL2Q8IZJ0 200 aa22.36■■□□□ 1.17
SNX27-204ENST00000458013 PAXBP1Q9Y5B6 917 aa22.36■■□□□ 1.17
SNX27-204ENST00000458013 RMND1Q9NWS8 449 aa22.36■■□□□ 1.17
SNX27-204ENST00000458013 CKAP4Q07065 602 aaKnown RBP22.35■■□□□ 1.17
SNX27-204ENST00000458013 VEZTQ9HBM0 779 aa22.35■■□□□ 1.17
SNX27-204ENST00000458013 PSMC4P43686 418 aa22.35■■□□□ 1.17
SNX27-204ENST00000458013 CCDC6Q16204 474 aa22.35■■□□□ 1.17
SNX27-204ENST00000458013 COPS6Q7L5N1 327 aa22.35■■□□□ 1.17
SNX27-204ENST00000458013 MAGEB6Q8N7X4 407 aa22.35■■□□□ 1.17
SNX27-204ENST00000458013 ESYT1Q9BSJ8 1104 aa22.35■■□□□ 1.17
SNX27-204ENST00000458013 PCDHB15Q9Y5E8 787 aa22.35■■□□□ 1.17
SNX27-204ENST00000458013 SAP30BPQ9UHR5 308 aaKnown RBP22.35■■□□□ 1.17
SNX27-204ENST00000458013 ABCC11Q96J66 1382 aa22.35■■□□□ 1.17
SNX27-204ENST00000458013 SLC9C2Q5TAH2 1124 aa22.35■■□□□ 1.17
SNX27-204ENST00000458013 MSL1Q68DK7 614 aa22.35■■□□□ 1.17
SNX27-204ENST00000458013 PROCA1Q8NCQ7 364 aaPredicted RBP22.35■■□□□ 1.17
SNX27-204ENST00000458013 CPA1P15085 419 aa22.35■■□□□ 1.17
SNX27-204ENST00000458013 CCDC152Q4G0S7 254 aa22.35■■□□□ 1.17
SNX27-204ENST00000458013 IQCGQ9H095 443 aaKnown RBP22.35■■□□□ 1.17
SNX27-204ENST00000458013 MICALL1Q8N3F8 863 aa22.34■■□□□ 1.17
SNX27-204ENST00000458013 ACEP12821 1306 aa22.34■■□□□ 1.17
SNX27-204ENST00000458013 ZGPATQ8N5A5 531 aaKnown RBP22.34■■□□□ 1.17
SNX27-204ENST00000458013 KLHL40Q2TBA0 621 aa22.34■■□□□ 1.17
SNX27-204ENST00000458013 C6orf163Q5TEZ5 329 aa22.34■■□□□ 1.17
SNX27-204ENST00000458013 C8orf58Q8NAV2 365 aa22.34■■□□□ 1.17
SNX27-204ENST00000458013 SMARCC2Q8TAQ2 1214 aa22.34■■□□□ 1.17
SNX27-204ENST00000458013 PPP1R9BQ96SB3 815 aa22.34■■□□□ 1.17
SNX27-204ENST00000458013 TTC21AQ8NDW8 1320 aa22.34■■□□□ 1.17
SNX27-204ENST00000458013 ZEB2O60315 1214 aa22.34■■□□□ 1.17
SNX27-204ENST00000458013 EFCAB5A4FU69 1503 aa22.34■■□□□ 1.17
SNX27-204ENST00000458013 ZNF569Q5MCW4 686 aa22.33■■□□□ 1.17
SNX27-204ENST00000458013 MRPS27Q92552 414 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms