RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 PROSER2Q86WR7 435 aaPredicted RBP12.99□□□□□ -0.33
ZNF550-204ENST00000447310 ERO1AQ96HE7 468 aa12.99□□□□□ -0.33
ZNF550-204ENST00000447310 ZFYVE16Q7Z3T8 1539 aa12.98□□□□□ -0.33
ZNF550-204ENST00000447310 TDO2P48775 406 aa12.98□□□□□ -0.33
ZNF550-204ENST00000447310 CCDC12Q8WUD4 166 aaPredicted RBP12.98□□□□□ -0.33
ZNF550-204ENST00000447310 NACAP1Q9BZK3 213 aa12.98□□□□□ -0.33
ZNF550-204ENST00000447310 NCOA3Q9Y6Q9 1424 aa12.98□□□□□ -0.33
ZNF550-204ENST00000447310 SBNO1A3KN83 1393 aa12.98□□□□□ -0.33
ZNF550-204ENST00000447310 A0A0D9SFI3 127 aa12.98□□□□□ -0.33
ZNF550-204ENST00000447310 IARSP41252 1262 aaKnown RBP12.98□□□□□ -0.33
ZNF550-204ENST00000447310 OTUD7BQ6GQQ9 843 aa12.98□□□□□ -0.33
ZNF550-204ENST00000447310 ANKRD24Q8TF21 1146 aa12.98□□□□□ -0.33
ZNF550-204ENST00000447310 AKAP2Q9Y2D5 859 aa12.98□□□□□ -0.33
ZNF550-204ENST00000447310 MRVI1Q9Y6F6 885 aa12.98□□□□□ -0.33
ZNF550-204ENST00000447310 AATKQ6ZMQ8 1374 aa12.98□□□□□ -0.33
ZNF550-204ENST00000447310 SETQ01105 290 aaPredicted RBP12.97□□□□□ -0.33
ZNF550-204ENST00000447310 EAF2Q96CJ1 260 aaPredicted RBP12.97□□□□□ -0.33
ZNF550-204ENST00000447310 KCNQ3O43525 872 aa12.97□□□□□ -0.33
ZNF550-204ENST00000447310 FAM193AP78312 1265 aa12.97□□□□□ -0.33
ZNF550-204ENST00000447310 NCOA7Q8NI08 942 aa12.97□□□□□ -0.33
ZNF550-204ENST00000447310 SUCLG2Q96I99 432 aa12.97□□□□□ -0.33
ZNF550-204ENST00000447310 ZNF215Q9UL58 517 aaPredicted RBP12.97□□□□□ -0.33
ZNF550-204ENST00000447310 LMAN1P49257 510 aa12.97□□□□□ -0.33
ZNF550-204ENST00000447310 UBAC1Q9BSL1 405 aa12.97□□□□□ -0.33
ZNF550-204ENST00000447310 IQSEC2Q5JU85 1478 aa12.97□□□□□ -0.33
ZNF550-204ENST00000447310 GOLGA8AA7E2F4 631 aa12.97□□□□□ -0.33
ZNF550-204ENST00000447310 METAP2P50579 478 aaKnown RBP eCLIP12.97□□□□□ -0.33
ZNF550-204ENST00000447310 WASF1Q92558 559 aa12.97□□□□□ -0.33
ZNF550-204ENST00000447310 DBNDD2Q9BQY9 259 aa12.97□□□□□ -0.33
ZNF550-204ENST00000447310 PAG1Q9NWQ8 432 aa12.97□□□□□ -0.33
ZNF550-204ENST00000447310 TNRQ92752 1358 aa12.96□□□□□ -0.33
ZNF550-204ENST00000447310 SPHKAPQ2M3C7 1700 aa12.96□□□□□ -0.33
ZNF550-204ENST00000447310 ALG1Q9BT22 464 aa12.96□□□□□ -0.33
ZNF550-204ENST00000447310 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.33
ZNF550-204ENST00000447310 ARFGAP3Q9NP61 516 aa12.96□□□□□ -0.33
ZNF550-204ENST00000447310 SHROOM2Q13796 1616 aa12.96□□□□□ -0.33
ZNF550-204ENST00000447310 ABCA6Q8N139 1617 aa12.96□□□□□ -0.33
ZNF550-204ENST00000447310 IFIT3O14879 490 aaKnown RBP12.96□□□□□ -0.33
ZNF550-204ENST00000447310 TXLNAP40222 546 aa12.96□□□□□ -0.33
ZNF550-204ENST00000447310 EIF4A1P60842 406 aaKnown RBP12.96□□□□□ -0.33
ZNF550-204ENST00000447310 ZFP91Q96JP5 570 aaPredicted RBP12.96□□□□□ -0.33
ZNF550-204ENST00000447310 MAGEC2Q9UBF1 373 aaPredicted RBP12.96□□□□□ -0.33
ZNF550-204ENST00000447310 NAPBQ9H115 298 aa12.96□□□□□ -0.34
ZNF550-204ENST00000447310 ZNHIT6Q9NWK9 470 aaKnown RBP12.96□□□□□ -0.34
ZNF550-204ENST00000447310 BABAM1Q9NWV8 329 aa12.96□□□□□ -0.34
ZNF550-204ENST00000447310 SLC12A7Q9Y666 1083 aa12.96□□□□□ -0.34
ZNF550-204ENST00000447310 PNPLA6Q8IY17 1366 aa12.95□□□□□ -0.34
ZNF550-204ENST00000447310 TIMM10P62072 90 aa12.95□□□□□ -0.34
ZNF550-204ENST00000447310 PRC1O43663 620 aa12.95□□□□□ -0.34
ZNF550-204ENST00000447310 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
ZNF550-204ENST00000447310 BEND3Q5T5X7 828 aa12.95□□□□□ -0.34
ZNF550-204ENST00000447310 TOM1L2Q6ZVM7 507 aa12.95□□□□□ -0.34
ZNF550-204ENST00000447310 DDX21Q9NR30 783 aaKnown RBP eCLIP12.95□□□□□ -0.34
ZNF550-204ENST00000447310 MCM6Q14566 821 aa12.95□□□□□ -0.34
ZNF550-204ENST00000447310 CACTINQ8WUQ7 758 aaKnown RBP12.95□□□□□ -0.34
ZNF550-204ENST00000447310 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
ZNF550-204ENST00000447310 GOLGA6L9A6NEM1 432 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 H0YHG0 523 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 DMTNQ08495 405 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 IFIT5Q13325 482 aaKnown RBP12.94□□□□□ -0.34
ZNF550-204ENST00000447310 HSP90AB3PQ58FF7 597 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 SLC26A6Q9BXS9 759 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 PLEKHG3A1L390 1219 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 PDE4CQ08493 712 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 ANKLE2Q86XL3 938 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 STRN4Q9NRL3 753 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 CWC25Q9NXE8 425 aaPredicted RBP12.94□□□□□ -0.34
ZNF550-204ENST00000447310 A0A087WWV3 80 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 GABPB1Q06547 395 aaPredicted RBP12.94□□□□□ -0.34
ZNF550-204ENST00000447310 NFATC2IPQ8NCF5 419 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 MED14O60244 1454 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 EFCAB6Q5THR3 1501 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 RNMTO43148 476 aaKnown RBP12.94□□□□□ -0.34
ZNF550-204ENST00000447310 HOXB7P09629 217 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 SSRP1Q08945 709 aaKnown RBP12.94□□□□□ -0.34
ZNF550-204ENST00000447310 TMEM67Q5HYA8 995 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 USP28Q96RU2 1077 aa12.94□□□□□ -0.34
ZNF550-204ENST00000447310 RXRAP19793 462 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 TNNI3KQ59H18 835 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 LRRC8AQ8IWT6 810 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 PI4K2BQ8TCG2 481 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 MAP4K1Q92918 833 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 MPHOSPH8Q99549 860 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 CEP131Q9UPN4 1083 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 FPGT-TNNI3KV9GXZ4 949 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 ARHGEF10O15013 1369 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 TMEM87AQ8NBN3 555 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 SEC62Q99442 399 aaKnown RBP12.93□□□□□ -0.34
ZNF550-204ENST00000447310 ERCC6L2Q5T890 1561 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 MINDY4BA8MYZ0 360 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 GBP3Q9H0R5 595 aa12.93□□□□□ -0.34
ZNF550-204ENST00000447310 KARSQ15046 597 aaKnown RBP12.92□□□□□ -0.34
ZNF550-204ENST00000447310 SRRTQ9BXP5 876 aaKnown RBP12.92□□□□□ -0.34
ZNF550-204ENST00000447310 TRIM34Q9BYJ4 488 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 LRP2BPQ9P2M1 347 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 LRRC7Q96NW7 1537 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 ERCC6LQ2NKX8 1250 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 NBPF6Q5VWK0 638 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 ATL3Q6DD88 541 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 IFNL2Q8IZJ0 200 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms