RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 ERC1Q8IUD2 1116 aa11.71□□□□□ -0.53
CASP4-203ENST00000444739 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.53
CASP4-203ENST00000444739 TXLNBQ8N3L3 684 aa11.71□□□□□ -0.53
CASP4-203ENST00000444739 NFATC2IPQ8NCF5 419 aa11.71□□□□□ -0.53
CASP4-203ENST00000444739 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.53
CASP4-203ENST00000444739 NAT10Q9H0A0 1025 aaKnown RBP11.71□□□□□ -0.53
CASP4-203ENST00000444739 PHLPP2Q6ZVD8 1323 aa11.71□□□□□ -0.53
CASP4-203ENST00000444739 PLEKHG3A1L390 1219 aa11.71□□□□□ -0.54
CASP4-203ENST00000444739 PI4KAP2A4QPH2 592 aa11.71□□□□□ -0.54
CASP4-203ENST00000444739 TADA3O75528 432 aa11.71□□□□□ -0.54
CASP4-203ENST00000444739 ETF1P62495 437 aaKnown RBP11.71□□□□□ -0.54
CASP4-203ENST00000444739 ZNF589Q86UQ0 364 aaPredicted RBP11.71□□□□□ -0.54
CASP4-203ENST00000444739 PI4KAP1Q8N8J0 262 aa11.71□□□□□ -0.54
CASP4-203ENST00000444739 SMARCC2Q8TAQ2 1214 aa11.71□□□□□ -0.54
CASP4-203ENST00000444739 UBXN4Q92575 508 aa11.71□□□□□ -0.54
CASP4-203ENST00000444739 XPO4Q9C0E2 1151 aaKnown RBP11.71□□□□□ -0.54
CASP4-203ENST00000444739 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.54
CASP4-203ENST00000444739 ABCC6O95255 1503 aa11.7□□□□□ -0.54
CASP4-203ENST00000444739 POLR3GO15318 223 aaPredicted RBP11.7□□□□□ -0.54
CASP4-203ENST00000444739 ATP8B1O43520 1251 aa11.7□□□□□ -0.54
CASP4-203ENST00000444739 NPM1P06748 294 aaKnown RBP eCLIP11.7□□□□□ -0.54
CASP4-203ENST00000444739 SFPQP23246 707 aaKnown RBP eCLIP11.7□□□□□ -0.54
CASP4-203ENST00000444739 USPL1Q5W0Q7 1092 aa11.7□□□□□ -0.54
CASP4-203ENST00000444739 NAA16Q6N069 864 aaPredicted RBP11.7□□□□□ -0.54
CASP4-203ENST00000444739 TMC6Q7Z403 805 aa11.7□□□□□ -0.54
CASP4-203ENST00000444739 ERCC4Q92889 916 aaPredicted RBP11.7□□□□□ -0.54
CASP4-203ENST00000444739 USP28Q96RU2 1077 aa11.7□□□□□ -0.54
CASP4-203ENST00000444739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.7□□□□□ -0.54
CASP4-203ENST00000444739 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.7□□□□□ -0.54
CASP4-203ENST00000444739 NWD1Q149M9 1564 aa11.7□□□□□ -0.54
CASP4-203ENST00000444739 SEC31AO94979 1220 aaKnown RBP11.69□□□□□ -0.54
CASP4-203ENST00000444739 ST5P78524 1137 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 FSIP1Q8NA03 581 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 SMARCE1Q969G3 411 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 BPIFA3Q9BQP9 254 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 IFNKQ9P0W0 207 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 FANCGO15287 622 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 SASH3O75995 380 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 SCRN1Q12765 414 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 KRT32Q14532 448 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 DHX8Q14562 1220 aaKnown RBP11.69□□□□□ -0.54
CASP4-203ENST00000444739 GORABQ5T7V8 394 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 TRIM65Q6PJ69 517 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 EAF2Q96CJ1 260 aaPredicted RBP11.69□□□□□ -0.54
CASP4-203ENST00000444739 FSD1Q9BTV5 496 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 SRRTQ9BXP5 876 aaKnown RBP11.69□□□□□ -0.54
CASP4-203ENST00000444739 CHPF2Q9P2E5 772 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 DNAI1Q9UI46 699 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 LAMA4Q16363 1823 aa11.69□□□□□ -0.54
CASP4-203ENST00000444739 KDM3BQ7LBC6 1761 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 NUTM2FA1L443 756 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 EFCAB8A8MWE9 144 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 TAF5LO75529 589 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 SMC2O95347 1197 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 TBC1D8O95759 1140 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 EIF2S2P20042 333 aaKnown RBP11.68□□□□□ -0.54
CASP4-203ENST00000444739 CCDC158Q5M9N0 1113 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 NUTM2GQ5VZR2 741 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 ATL3Q6DD88 541 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 Q6ZUG5 572 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 HOMER1Q86YM7 354 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 FMR1NBQ8N0W7 255 aaPredicted RBP11.68□□□□□ -0.54
CASP4-203ENST00000444739 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 LLPHQ9BRT6 129 aaKnown RBP11.68□□□□□ -0.54
CASP4-203ENST00000444739 ALDH1L1O75891 902 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 SASH1O94885 1247 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 OAS2P29728 719 aaKnown RBP11.68□□□□□ -0.54
CASP4-203ENST00000444739 DPCR1Q3MIW9 517 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 KRBA2Q6ZNG9 492 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
CASP4-203ENST00000444739 MNS1Q8NEH6 495 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 NEK1Q96PY6 1258 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 NEDD4P46934 1319 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 COL15A1P39059 1388 aa11.68□□□□□ -0.54
CASP4-203ENST00000444739 MED1Q15648 1581 aaPredicted RBP11.67□□□□□ -0.54
CASP4-203ENST00000444739 CCP110O43303 1012 aa11.67□□□□□ -0.54
CASP4-203ENST00000444739 NRDCO43847 1150 aa11.67□□□□□ -0.54
CASP4-203ENST00000444739 TPM1P09493 284 aa11.67□□□□□ -0.54
CASP4-203ENST00000444739 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
CASP4-203ENST00000444739 HOXD11P31277 338 aaPredicted RBP11.67□□□□□ -0.54
CASP4-203ENST00000444739 LRRFIP1Q32MZ4 808 aaKnown RBP11.67□□□□□ -0.54
CASP4-203ENST00000444739 ZNF396Q96N95 335 aaPredicted RBP11.67□□□□□ -0.54
CASP4-203ENST00000444739 CCDC8Q9H0W5 538 aaPredicted RBP11.67□□□□□ -0.54
CASP4-203ENST00000444739 BOLA2Q9H3K6 86 aa11.67□□□□□ -0.54
CASP4-203ENST00000444739 ZCCHC17Q9NP64 241 aaKnown RBP11.67□□□□□ -0.54
CASP4-203ENST00000444739 TLR7Q9NYK1 1049 aaKnown RBP11.67□□□□□ -0.54
CASP4-203ENST00000444739 PARP3Q9Y6F1 533 aa11.67□□□□□ -0.54
CASP4-203ENST00000444739 ROBO2Q9HCK4 1378 aa11.67□□□□□ -0.54
CASP4-203ENST00000444739 PFKFB2O60825 505 aa11.67□□□□□ -0.54
CASP4-203ENST00000444739 ME1P48163 572 aa11.67□□□□□ -0.54
CASP4-203ENST00000444739 AMPHP49418 695 aa11.67□□□□□ -0.54
CASP4-203ENST00000444739 CC2D1AQ6P1N0 951 aaPredicted RBP11.67□□□□□ -0.54
CASP4-203ENST00000444739 ILDR1Q86SU0 546 aaPredicted RBP11.67□□□□□ -0.54
CASP4-203ENST00000444739 MRPS27Q92552 414 aaKnown RBP11.67□□□□□ -0.54
CASP4-203ENST00000444739 CARD6Q9BX69 1037 aa11.67□□□□□ -0.54
CASP4-203ENST00000444739 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
CASP4-203ENST00000444739 CTDNEP1O95476 244 aa11.66□□□□□ -0.54
CASP4-203ENST00000444739 HOXB7P09629 217 aa11.66□□□□□ -0.54
CASP4-203ENST00000444739 FOSBP53539 338 aa11.66□□□□□ -0.54
CASP4-203ENST00000444739 EIF4A1P60842 406 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms