RNA–Protein interactions for RNA: ENST00000441219.5

GABRE-203, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 1,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-203ENST00000441219 TMC4Q7Z404 712 aa11.77□□□□□ -0.53
GABRE-203ENST00000441219 CD99L2Q8TCZ2 262 aa11.77□□□□□ -0.53
GABRE-203ENST00000441219 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.77□□□□□ -0.53
GABRE-203ENST00000441219 RBM27Q9P2N5 1060 aaKnown RBP11.77□□□□□ -0.53
GABRE-203ENST00000441219 PAPPA2Q9BXP8 1791 aa11.76□□□□□ -0.53
GABRE-203ENST00000441219 ALDH1A1P00352 501 aa11.76□□□□□ -0.53
GABRE-203ENST00000441219 TCIRG1Q13488 830 aa11.76□□□□□ -0.53
GABRE-203ENST00000441219 PRKG1Q13976 671 aa11.76□□□□□ -0.53
GABRE-203ENST00000441219 TAF7Q15545 349 aaPredicted RBP11.76□□□□□ -0.53
GABRE-203ENST00000441219 EYA3Q99504 573 aa11.76□□□□□ -0.53
GABRE-203ENST00000441219 RSPH6AQ9H0K4 717 aa11.76□□□□□ -0.53
GABRE-203ENST00000441219 COL6A3P12111 3177 aa11.76□□□□□ -0.53
GABRE-203ENST00000441219 COL3A1P02461 1466 aaPredicted RBP11.75□□□□□ -0.53
GABRE-203ENST00000441219 PITPNM2Q9BZ72 1349 aa11.75□□□□□ -0.53
GABRE-203ENST00000441219 PTPN12Q05209 780 aaKnown RBP11.75□□□□□ -0.53
GABRE-203ENST00000441219 ZNF428Q96B54 188 aa11.75□□□□□ -0.53
GABRE-203ENST00000441219 ERO1AQ96HE7 468 aa11.75□□□□□ -0.53
GABRE-203ENST00000441219 EFCC1Q9HA90 598 aa11.75□□□□□ -0.53
GABRE-203ENST00000441219 MYOZ2Q9NPC6 264 aa11.75□□□□□ -0.53
GABRE-203ENST00000441219 G3V3G9 751 aa11.74□□□□□ -0.53
GABRE-203ENST00000441219 MYCP01106 439 aaPredicted RBP11.74□□□□□ -0.53
GABRE-203ENST00000441219 NF2P35240 595 aa11.74□□□□□ -0.53
GABRE-203ENST00000441219 EIF4G2P78344 907 aaKnown RBP eCLIP11.74□□□□□ -0.53
GABRE-203ENST00000441219 SLC4A8Q2Y0W8 1093 aa11.74□□□□□ -0.53
GABRE-203ENST00000441219 DCAF8Q5TAQ9 597 aa11.74□□□□□ -0.53
GABRE-203ENST00000441219 SPRYD7Q5W111 196 aa11.74□□□□□ -0.53
GABRE-203ENST00000441219 RSBN1LQ6PCB5 846 aaPredicted RBP11.74□□□□□ -0.53
GABRE-203ENST00000441219 CELF1Q92879 486 aaKnown RBP11.74□□□□□ -0.53
GABRE-203ENST00000441219 ZNF333Q96JL9 665 aa11.74□□□□□ -0.53
GABRE-203ENST00000441219 THUMPD2Q9BTF0 503 aaKnown RBP11.74□□□□□ -0.53
GABRE-203ENST00000441219 TRMT112Q9UI30 125 aaKnown RBP11.74□□□□□ -0.53
GABRE-203ENST00000441219 SH3TC1Q8TE82 1336 aa11.73□□□□□ -0.53
GABRE-203ENST00000441219 USP17L8P0C7I0 530 aa11.73□□□□□ -0.53
GABRE-203ENST00000441219 ARMC9Q7Z3E5 817 aa11.73□□□□□ -0.53
GABRE-203ENST00000441219 NLRP10Q86W26 655 aa11.73□□□□□ -0.53
GABRE-203ENST00000441219 IFNL1Q8IU54 200 aa11.73□□□□□ -0.53
GABRE-203ENST00000441219 AGBL3Q8NEM8 1001 aa11.73□□□□□ -0.53
GABRE-203ENST00000441219 TBC1D16Q8TBP0 767 aa11.73□□□□□ -0.53
GABRE-203ENST00000441219 ZC3H12CQ9C0D7 883 aaKnown RBP11.73□□□□□ -0.53
GABRE-203ENST00000441219 LAMA3Q16787 3333 aa11.73□□□□□ -0.53
GABRE-203ENST00000441219 MANSC4A6NHS7 340 aaPredicted RBP11.72□□□□□ -0.53
GABRE-203ENST00000441219 IGF2BP3O00425 579 aaKnown RBP eCLIP11.72□□□□□ -0.53
GABRE-203ENST00000441219 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
GABRE-203ENST00000441219 EIF4A1P60842 406 aaKnown RBP11.72□□□□□ -0.53
GABRE-203ENST00000441219 NBPF9Q3BBW0 867 aa11.72□□□□□ -0.53
GABRE-203ENST00000441219 ZNF609O15014 1411 aa11.72□□□□□ -0.53
GABRE-203ENST00000441219 UFL1O94874 794 aa11.71□□□□□ -0.53
GABRE-203ENST00000441219 ANXA1P04083 346 aa11.71□□□□□ -0.53
GABRE-203ENST00000441219 CAP1Q01518 475 aa11.71□□□□□ -0.53
GABRE-203ENST00000441219 SLC9C1Q4G0N8 1177 aa11.71□□□□□ -0.53
GABRE-203ENST00000441219 DPF3Q92784 378 aa11.71□□□□□ -0.53
GABRE-203ENST00000441219 FZD1Q9UP38 647 aa11.71□□□□□ -0.53
GABRE-203ENST00000441219 POLR2AP24928 1970 aaKnown RBP11.7□□□□□ -0.54
GABRE-203ENST00000441219 HTATSF1O43719 755 aaKnown RBP11.7□□□□□ -0.54
GABRE-203ENST00000441219 U2AF1L5P0DN76 240 aaPredicted RBP11.7□□□□□ -0.54
GABRE-203ENST00000441219 U2AF1Q01081 240 aaKnown RBP eCLIP11.7□□□□□ -0.545e-7■■■■□ 20.9
GABRE-203ENST00000441219 CRHR2Q13324 411 aa11.7□□□□□ -0.54
GABRE-203ENST00000441219 GMLQ99445 158 aa11.7□□□□□ -0.54
GABRE-203ENST00000441219 ANGEL1Q9UNK9 670 aaKnown RBP11.7□□□□□ -0.54
GABRE-203ENST00000441219 PTCH2Q9Y6C5 1203 aa11.7□□□□□ -0.54
GABRE-203ENST00000441219 ERBB4Q15303 1308 aa11.69□□□□□ -0.54
GABRE-203ENST00000441219 INHBEP58166 350 aa11.69□□□□□ -0.54
GABRE-203ENST00000441219 SP3Q02447 781 aa11.69□□□□□ -0.54
GABRE-203ENST00000441219 PROSER3Q2NL68 480 aa11.69□□□□□ -0.54
GABRE-203ENST00000441219 HSP90AB3PQ58FF7 597 aa11.69□□□□□ -0.54
GABRE-203ENST00000441219 LDLRAD1Q5T700 205 aa11.69□□□□□ -0.54
GABRE-203ENST00000441219 LRP10Q7Z4F1 713 aa11.69□□□□□ -0.54
GABRE-203ENST00000441219 NBPF11Q86T75 865 aa11.69□□□□□ -0.54
GABRE-203ENST00000441219 PNISRQ8TF01 805 aaKnown RBP11.69□□□□□ -0.54
GABRE-203ENST00000441219 NECTIN2Q92692 538 aa11.69□□□□□ -0.54
GABRE-203ENST00000441219 SLC10A4Q96EP9 437 aa11.69□□□□□ -0.54
GABRE-203ENST00000441219 NUP98P52948 1817 aa11.68□□□□□ -0.54
GABRE-203ENST00000441219 WTIPA6NIX2 430 aaPredicted RBP11.68□□□□□ -0.54
GABRE-203ENST00000441219 SASH1O94885 1247 aa11.68□□□□□ -0.54
GABRE-203ENST00000441219 EIF2S2P20042 333 aaKnown RBP11.68□□□□□ -0.54
GABRE-203ENST00000441219 AIMP1Q12904 312 aaKnown RBP11.68□□□□□ -0.54
GABRE-203ENST00000441219 PDIA6Q15084 440 aa11.68□□□□□ -0.54
GABRE-203ENST00000441219 CLMNQ96JQ2 1002 aa11.68□□□□□ -0.54
GABRE-203ENST00000441219 ANKIB1Q9P2G1 1089 aa11.68□□□□□ -0.54
GABRE-203ENST00000441219 GGA1Q9UJY5 639 aa11.68□□□□□ -0.54
GABRE-203ENST00000441219 USP17L3A6NCW0 530 aa11.67□□□□□ -0.54
GABRE-203ENST00000441219 USP17L4A6NCW7 530 aa11.67□□□□□ -0.54
GABRE-203ENST00000441219 SOX1O00570 391 aaPredicted RBP11.67□□□□□ -0.54
GABRE-203ENST00000441219 WNT10BO00744 389 aa11.67□□□□□ -0.54
GABRE-203ENST00000441219 USP17L1Q7RTZ2 530 aa11.67□□□□□ -0.54
GABRE-203ENST00000441219 LRCH3Q96II8 777 aa11.67□□□□□ -0.54
GABRE-203ENST00000441219 WNK4Q96J92 1243 aa11.67□□□□□ -0.54
GABRE-203ENST00000441219 MXD3Q9BW11 206 aa11.67□□□□□ -0.54
GABRE-203ENST00000441219 PRO3102Q9H379 93 aa11.67□□□□□ -0.54
GABRE-203ENST00000441219 NUDCQ9Y266 331 aa11.67□□□□□ -0.54
GABRE-203ENST00000441219 PER1O15534 1290 aaPredicted RBP11.66□□□□□ -0.54
GABRE-203ENST00000441219 ZBTB48P10074 688 aaPredicted RBP11.66□□□□□ -0.54
GABRE-203ENST00000441219 RPS8P62241 208 aaKnown RBP11.66□□□□□ -0.54
GABRE-203ENST00000441219 SF3B3Q15393 1217 aaKnown RBP11.66□□□□□ -0.54
GABRE-203ENST00000441219 OTUD7BQ6GQQ9 843 aa11.66□□□□□ -0.54
GABRE-203ENST00000441219 COPS6Q7L5N1 327 aa11.66□□□□□ -0.54
GABRE-203ENST00000441219 SH3TC2Q8TF17 1288 aa11.66□□□□□ -0.54
GABRE-203ENST00000441219 XAGE3Q8WTP9 111 aa11.66□□□□□ -0.54
GABRE-203ENST00000441219 FAM89AQ96GI7 184 aa11.66□□□□□ -0.54
GABRE-203ENST00000441219 CFAP53Q96M91 514 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms