RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 PIK3CDO00329 1044 aa12.04□□□□□ -0.48
LSMEM1-202ENST00000439068 MMP10P09238 476 aa12.04□□□□□ -0.48
LSMEM1-202ENST00000439068 ARHGAP27Q6ZUM4 889 aa12.04□□□□□ -0.48
LSMEM1-202ENST00000439068 IFNL2Q8IZJ0 200 aa12.04□□□□□ -0.48
LSMEM1-202ENST00000439068 BCS1LQ9Y276 419 aa12.04□□□□□ -0.48
LSMEM1-202ENST00000439068 RTCBQ9Y3I0 505 aaKnown RBP12.04□□□□□ -0.48
LSMEM1-202ENST00000439068 TUBGCP6Q96RT7 1819 aa12.03□□□□□ -0.48
LSMEM1-202ENST00000439068 PPEF1O14829 653 aaPredicted RBP12.03□□□□□ -0.48
LSMEM1-202ENST00000439068 LMOD1P29536 600 aaPredicted RBP12.03□□□□□ -0.48
LSMEM1-202ENST00000439068 PDXDC2PQ6P474 469 aa12.03□□□□□ -0.48
LSMEM1-202ENST00000439068 ARMC2Q8NEN0 867 aa12.03□□□□□ -0.48
LSMEM1-202ENST00000439068 FCF1Q9Y324 198 aaKnown RBP12.03□□□□□ -0.48
LSMEM1-202ENST00000439068 PTK2Q05397 1052 aa12.02□□□□□ -0.49
LSMEM1-202ENST00000439068 SMIM5Q71RC9 77 aa12.02□□□□□ -0.49
LSMEM1-202ENST00000439068 LINC00116Q8NCU8 138 aa12.02□□□□□ -0.49
LSMEM1-202ENST00000439068 CCDC87Q9NVE4 849 aa12.02□□□□□ -0.49
LSMEM1-202ENST00000439068 ASAP1Q9ULH1 1129 aa12.02□□□□□ -0.49
LSMEM1-202ENST00000439068 A0A0G2JLW4 131 aa12.01□□□□□ -0.49
LSMEM1-202ENST00000439068 PDIA4P13667 645 aaKnown RBP12.01□□□□□ -0.49
LSMEM1-202ENST00000439068 RFC4P35249 363 aa12.01□□□□□ -0.49
LSMEM1-202ENST00000439068 RETREG2Q8NC44 543 aa12.01□□□□□ -0.49
LSMEM1-202ENST00000439068 BAP1Q92560 729 aa12.01□□□□□ -0.49
LSMEM1-202ENST00000439068 PARP3Q9Y6F1 533 aa12.01□□□□□ -0.49
LSMEM1-202ENST00000439068 C5P01031 1676 aa12□□□□□ -0.49
LSMEM1-202ENST00000439068 HSP90AB1P08238 724 aaKnown RBP12□□□□□ -0.49
LSMEM1-202ENST00000439068 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
LSMEM1-202ENST00000439068 LINC01559Q495D7 138 aa12□□□□□ -0.49
LSMEM1-202ENST00000439068 RC3H1Q5TC82 1133 aaKnown RBP12□□□□□ -0.49
LSMEM1-202ENST00000439068 AMIGO3Q86WK7 504 aa12□□□□□ -0.49
LSMEM1-202ENST00000439068 PCDHB9Q9Y5E1 797 aa12□□□□□ -0.49
LSMEM1-202ENST00000439068 PHKG2P15735 406 aa11.99□□□□□ -0.49
LSMEM1-202ENST00000439068 ADAM32Q8TC27 787 aa11.99□□□□□ -0.49
LSMEM1-202ENST00000439068 PBXIP1Q96AQ6 731 aa11.99□□□□□ -0.49
LSMEM1-202ENST00000439068 ATG3Q9NT62 314 aa11.99□□□□□ -0.49
LSMEM1-202ENST00000439068 MAFBQ9Y5Q3 323 aaPredicted RBP11.99□□□□□ -0.49
LSMEM1-202ENST00000439068 EMILIN1Q9Y6C2 1016 aa11.99□□□□□ -0.49
LSMEM1-202ENST00000439068 WASHC2AQ641Q2 1341 aa11.99□□□□□ -0.49
LSMEM1-202ENST00000439068 C4BP0C0L5 1744 aa11.99□□□□□ -0.49
LSMEM1-202ENST00000439068 RGPD2P0DJD1 1756 aa11.98□□□□□ -0.49
LSMEM1-202ENST00000439068 ERVV-2B6SEH9 535 aa11.98□□□□□ -0.49
LSMEM1-202ENST00000439068 ITPK1Q13572 414 aa11.98□□□□□ -0.49
LSMEM1-202ENST00000439068 SPNS2Q8IVW8 549 aa11.98□□□□□ -0.49
LSMEM1-202ENST00000439068 DNAJC5GQ8N7S2 189 aa11.98□□□□□ -0.49
LSMEM1-202ENST00000439068 GPKOWQ92917 476 aaPredicted RBP eCLIP11.98□□□□□ -0.49
LSMEM1-202ENST00000439068 ARHGAP9Q9BRR9 750 aa11.98□□□□□ -0.49
LSMEM1-202ENST00000439068 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
LSMEM1-202ENST00000439068 GPSM3Q9Y4H4 160 aa11.98□□□□□ -0.49
LSMEM1-202ENST00000439068 KDM2BQ8NHM5 1336 aa11.97□□□□□ -0.49
LSMEM1-202ENST00000439068 FSTL1Q12841 308 aa11.97□□□□□ -0.49
LSMEM1-202ENST00000439068 SH3BP5LQ7L8J4 393 aa11.97□□□□□ -0.49
LSMEM1-202ENST00000439068 FAM174AQ8TBP5 190 aa11.97□□□□□ -0.49
LSMEM1-202ENST00000439068 FOXJ1Q92949 421 aa11.97□□□□□ -0.49
LSMEM1-202ENST00000439068 RNF166Q96A37 237 aaPredicted RBP11.97□□□□□ -0.49
LSMEM1-202ENST00000439068 CARD14Q9BXL6 1004 aa11.97□□□□□ -0.49
LSMEM1-202ENST00000439068 HCSTQ9UBK5 93 aa11.97□□□□□ -0.49
LSMEM1-202ENST00000439068 RPS6KA4O75676 772 aa11.96□□□□□ -0.49
LSMEM1-202ENST00000439068 DPEP1P16444 411 aa11.96□□□□□ -0.49
LSMEM1-202ENST00000439068 PLEKHO1Q53GL0 409 aaPredicted RBP11.96□□□□□ -0.49
LSMEM1-202ENST00000439068 C9orf131Q5VYM1 1079 aa11.96□□□□□ -0.49
LSMEM1-202ENST00000439068 DCAF5Q96JK2 942 aa11.96□□□□□ -0.49
LSMEM1-202ENST00000439068 CEP126Q9P2H0 1117 aa11.96□□□□□ -0.49
LSMEM1-202ENST00000439068 MAGEB6P1A0A0J9YX57 407 aa11.95□□□□□ -0.5
LSMEM1-202ENST00000439068 ATP9BO43861 1147 aa11.95□□□□□ -0.5
LSMEM1-202ENST00000439068 CABP4P57796 275 aa11.95□□□□□ -0.5
LSMEM1-202ENST00000439068 KCNC4Q03721 635 aa11.95□□□□□ -0.5
LSMEM1-202ENST00000439068 DALRD3Q5D0E6 543 aaKnown RBP11.95□□□□□ -0.5
LSMEM1-202ENST00000439068 NMRK2Q9NPI5 230 aa11.95□□□□□ -0.5
LSMEM1-202ENST00000439068 TAF1LQ8IZX4 1826 aa11.95□□□□□ -0.5
LSMEM1-202ENST00000439068 SKIP12755 728 aa11.94□□□□□ -0.5
LSMEM1-202ENST00000439068 GYS1P13807 737 aa11.94□□□□□ -0.5
LSMEM1-202ENST00000439068 AMOTQ4VCS5 1084 aa11.94□□□□□ -0.5
LSMEM1-202ENST00000439068 C4orf48Q5BLP8 95 aa11.94□□□□□ -0.5
LSMEM1-202ENST00000439068 ZBTB33Q86T24 672 aa11.94□□□□□ -0.5
LSMEM1-202ENST00000439068 KLRG1Q96E93 195 aa11.94□□□□□ -0.5
LSMEM1-202ENST00000439068 POLKQ9UBT6 870 aa11.94□□□□□ -0.5
LSMEM1-202ENST00000439068 PLEKHG2Q9H7P9 1386 aa11.93□□□□□ -0.5
LSMEM1-202ENST00000439068 CNTNAP4Q9C0A0 1308 aa11.93□□□□□ -0.5
LSMEM1-202ENST00000439068 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
LSMEM1-202ENST00000439068 PLA2G2CQ5R387 149 aa11.93□□□□□ -0.5
LSMEM1-202ENST00000439068 DEPDC4Q8N2C3 294 aa11.93□□□□□ -0.5
LSMEM1-202ENST00000439068 PXDNLA1KZ92 1463 aa11.93□□□□□ -0.5
LSMEM1-202ENST00000439068 UBR3Q6ZT12 1888 aa11.92□□□□□ -0.5
LSMEM1-202ENST00000439068 CARNS1A5YM72 827 aa11.92□□□□□ -0.5
LSMEM1-202ENST00000439068 RNF223E7ERA6 249 aa11.92□□□□□ -0.5
LSMEM1-202ENST00000439068 MTHFSP49914 203 aa11.92□□□□□ -0.5
LSMEM1-202ENST00000439068 AGERQ15109 404 aa11.92□□□□□ -0.5
LSMEM1-202ENST00000439068 TSGA10IPQ3SY00 556 aa11.92□□□□□ -0.5
LSMEM1-202ENST00000439068 ZNF511Q8NB15 262 aa11.92□□□□□ -0.5
LSMEM1-202ENST00000439068 RRAGCQ9HB90 399 aa11.92□□□□□ -0.5
LSMEM1-202ENST00000439068 RNF181Q9P0P0 153 aa11.92□□□□□ -0.5
LSMEM1-202ENST00000439068 ITGB4P16144 1822 aa11.91□□□□□ -0.5
LSMEM1-202ENST00000439068 PTCD1O75127 700 aaKnown RBP11.91□□□□□ -0.5
LSMEM1-202ENST00000439068 KCNA3P22001 575 aa11.91□□□□□ -0.5
LSMEM1-202ENST00000439068 TNNT2P45379 298 aaPredicted RBP11.91□□□□□ -0.5
LSMEM1-202ENST00000439068 EIF4A2Q14240 407 aaKnown RBP11.91□□□□□ -0.5
LSMEM1-202ENST00000439068 ZNF530Q6P9A1 599 aaPredicted RBP11.91□□□□□ -0.5
LSMEM1-202ENST00000439068 SH3RF1Q7Z6J0 888 aa11.91□□□□□ -0.5
LSMEM1-202ENST00000439068 PHTF2Q8N3S3 785 aa11.91□□□□□ -0.5
LSMEM1-202ENST00000439068 SMC1BQ8NDV3 1235 aa11.91□□□□□ -0.5
LSMEM1-202ENST00000439068 ITGBL1O95965 494 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms