RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 KCTD2Q14681 263 aa2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 SWI5Q1ZZU3 235 aa2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 PERM1Q5SV97 790 aa2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 INTS5Q6P9B9 1019 aaKnown RBP2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 SHISA2Q6UWI4 295 aa2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 PRR23CQ6ZRP0 262 aa2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 TMEM130Q8N3G9 435 aa2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 GIMAP7Q8NHV1 300 aa2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 PLD4Q96BZ4 506 aa2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 POM121Q96HA1 1249 aa2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 UCN2Q96RP3 112 aa2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 LPIN3Q9BQK8 851 aa2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 SSBP4Q9BWG4 385 aaPredicted RBP2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 SMG9Q9H0W8 520 aaKnown RBP2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 TLR7Q9NYK1 1049 aaKnown RBP2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 TFIP11Q9UBB9 837 aaKnown RBP2.61□□□□□ -1.99
HMGN1P33-201ENST00000432945 USP9XQ93008 2570 aaPredicted RBP2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 LOC102724428A0A0B4J2F2 783 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 POM121CA8CG34 1229 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 DHX15O43143 795 aaKnown RBP2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 HYAL3O43820 417 aaPredicted RBP2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 XYLBO75191 536 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 SMNDC1O75940 238 aaKnown RBP eCLIP2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 RPLP1P05386 114 aaKnown RBP2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 HOXD8P13378 290 aaPredicted RBP2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 GLB1P16278 677 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 FSTP19883 344 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 IRAK1P51617 712 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 SIK1P57059 783 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 DPYDQ12882 1025 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 PTK7Q13308 1070 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 MCTP1Q6DN14 999 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 KRT25Q7Z3Z0 450 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 FAM200AQ8TCP9 573 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 PIK3R5Q8WYR1 880 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 IFT43Q96FT9 208 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 PPP1R12CQ9BZL4 782 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 NAGPAQ9UK23 515 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 WWC3Q9ULE0 1092 aa2.6□□□□□ -1.99
HMGN1P33-201ENST00000432945 COBLO75128 1261 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 SASH3O75995 380 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 PCSK2P16519 638 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 YBX3P16989 372 aaKnown RBP eCLIP2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 BRD2P25440 801 aaKnown RBP2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 NOS3P29474 1203 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 WEE1P30291 646 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 CABP4P57796 275 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 HYAL2Q12891 473 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 FOXD4L6Q3SYB3 417 aaPredicted RBP2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 FOXD4L3Q6VB84 417 aaPredicted RBP2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 DZIP1LQ8IYY4 767 aaKnown RBP2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 CMTR1Q8N1G2 835 aaKnown RBP2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 IL22RA1Q8N6P7 574 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 ABTB2Q8N961 1025 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 KLHL23Q8NBE8 558 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 TTC16Q8NEE8 873 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 ADAMTS19Q8TE59 1207 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 KLK14Q9P0G3 267 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 STOML1Q9UBI4 398 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 DMGDHQ9UI17 866 aaKnown RBP2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 RAXQ9Y2V3 346 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 RTCBQ9Y3I0 505 aaKnown RBP2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 PPME1Q9Y570 386 aa2.59□□□□□ -1.99
HMGN1P33-201ENST00000432945 HMGXB3Q12766 1538 aa2.58□□□□□ -2
HMGN1P33-201ENST00000432945 A6NJR5 290 aa2.58□□□□□ -2
HMGN1P33-201ENST00000432945 F8W735 103 aaPredicted RBP2.58□□□□□ -2
HMGN1P33-201ENST00000432945 SART1O43290 800 aaKnown RBP2.58□□□□□ -2
HMGN1P33-201ENST00000432945 DKK1O94907 266 aa2.58□□□□□ -2
HMGN1P33-201ENST00000432945 RFX1P22670 979 aa2.58□□□□□ -2
HMGN1P33-201ENST00000432945 TARSP26639 723 aaKnown RBP2.58□□□□□ -2
HMGN1P33-201ENST00000432945 LMOD1P29536 600 aaPredicted RBP2.58□□□□□ -2
HMGN1P33-201ENST00000432945 ARL4DP49703 201 aa2.58□□□□□ -2
HMGN1P33-201ENST00000432945 MLLT1Q03111 559 aaPredicted RBP2.58□□□□□ -2
HMGN1P33-201ENST00000432945 CPSF6Q16630 551 aaKnown RBP eCLIP2.58□□□□□ -2
HMGN1P33-201ENST00000432945 CRTC2Q53ET0 693 aaPredicted RBP2.58□□□□□ -2
HMGN1P33-201ENST00000432945 TTC39BQ5VTQ0 682 aaPredicted RBP2.58□□□□□ -2
HMGN1P33-201ENST00000432945 GDF6Q6KF10 455 aaPredicted RBP2.58□□□□□ -2
HMGN1P33-201ENST00000432945 C16orf46Q6P387 395 aa2.58□□□□□ -2
HMGN1P33-201ENST00000432945 NLRP13Q86W25 1043 aa2.58□□□□□ -2
HMGN1P33-201ENST00000432945 TREML1Q86YW5 311 aa2.58□□□□□ -2
HMGN1P33-201ENST00000432945 RGL4Q8IZJ4 473 aa2.58□□□□□ -2
HMGN1P33-201ENST00000432945 WNT8BQ93098 351 aa2.58□□□□□ -2
HMGN1P33-201ENST00000432945 QTRT2Q9H974 415 aaKnown RBP2.58□□□□□ -2
HMGN1P33-201ENST00000432945 GOLGA2P5Q9HBQ8 144 aa2.58□□□□□ -2
HMGN1P33-201ENST00000432945 HIF3AQ9Y2N7 669 aa2.58□□□□□ -2
HMGN1P33-201ENST00000432945 COL17A1Q9UMD9 1497 aaPredicted RBP2.58□□□□□ -2
HMGN1P33-201ENST00000432945 ANKRD11Q6UB99 2663 aaPredicted RBP2.57□□□□□ -2
HMGN1P33-201ENST00000432945 CHD6Q8TD26 2715 aa2.57□□□□□ -2
HMGN1P33-201ENST00000432945 KIF13AQ9H1H9 1805 aa2.57□□□□□ -2
HMGN1P33-201ENST00000432945 IGLV1-40P01703 118 aa2.57□□□□□ -2
HMGN1P33-201ENST00000432945 PTPRAP18433 802 aa2.57□□□□□ -2
HMGN1P33-201ENST00000432945 CDC27P30260 824 aa2.57□□□□□ -2
HMGN1P33-201ENST00000432945 CD68P34810 354 aaPredicted RBP2.57□□□□□ -2
HMGN1P33-201ENST00000432945 SCNN1AP37088 669 aa2.57□□□□□ -2
HMGN1P33-201ENST00000432945 CD97P48960 835 aa2.57□□□□□ -2
HMGN1P33-201ENST00000432945 HNRNPUQ00839 825 aaKnown RBP eCLIP2.57□□□□□ -2
HMGN1P33-201ENST00000432945 GRIK5Q16478 980 aa2.57□□□□□ -2
HMGN1P33-201ENST00000432945 TMEM132AQ24JP5 1023 aa2.57□□□□□ -2
HMGN1P33-201ENST00000432945 KANK4Q5T7N3 995 aaPredicted RBP2.57□□□□□ -2
HMGN1P33-201ENST00000432945 ANKRD34AQ69YU3 496 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms