RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 CASTP20810 708 aaKnown RBP23.53■■□□□ 1.36
VRK2-205ENST00000432057 CUL4AQ13619 759 aa23.53■■□□□ 1.36
VRK2-205ENST00000432057 CWC22Q9HCG8 908 aaKnown RBP23.53■■□□□ 1.36
VRK2-205ENST00000432057 CNNM1Q9NRU3 951 aa23.53■■□□□ 1.36
VRK2-205ENST00000432057 NIP7Q9Y221 180 aaKnown RBP eCLIP23.53■■□□□ 1.36
VRK2-205ENST00000432057 MYO5AQ9Y4I1 1855 aaKnown RBP23.53■■□□□ 1.36
VRK2-205ENST00000432057 CPA1P15085 419 aa23.52■■□□□ 1.36
VRK2-205ENST00000432057 ADCK5Q3MIX3 580 aa23.52■■□□□ 1.36
VRK2-205ENST00000432057 PARP10Q53GL7 1025 aa23.52■■□□□ 1.36
VRK2-205ENST00000432057 JAKMIP1Q96N16 626 aaKnown RBP23.52■■□□□ 1.36
VRK2-205ENST00000432057 AFF2P51816 1311 aa23.52■■□□□ 1.36
VRK2-205ENST00000432057 LAMA4Q16363 1823 aa23.52■■□□□ 1.36
VRK2-205ENST00000432057 ATP2B3Q16720 1220 aa23.51■■□□□ 1.35
VRK2-205ENST00000432057 TTC39AQ5SRH9 613 aa23.51■■□□□ 1.35
VRK2-205ENST00000432057 GORABQ5T7V8 394 aa23.51■■□□□ 1.35
VRK2-205ENST00000432057 CCDC129Q6ZRS4 1044 aa23.51■■□□□ 1.35
VRK2-205ENST00000432057 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.51■■□□□ 1.35
VRK2-205ENST00000432057 AK7Q96M32 723 aa23.51■■□□□ 1.35
VRK2-205ENST00000432057 SEC62Q99442 399 aaKnown RBP23.51■■□□□ 1.35
VRK2-205ENST00000432057 SLC27A2O14975 620 aa23.51■■□□□ 1.35
VRK2-205ENST00000432057 TAF5LO75529 589 aa23.51■■□□□ 1.35
VRK2-205ENST00000432057 NTSR2O95665 410 aa23.51■■□□□ 1.35
VRK2-205ENST00000432057 IL27Q8NEV9 243 aa23.51■■□□□ 1.35
VRK2-205ENST00000432057 A0A1B0GUL6 1792 aa23.5■■□□□ 1.35
VRK2-205ENST00000432057 CNTNAP4Q9C0A0 1308 aa23.5■■□□□ 1.35
VRK2-205ENST00000432057 GSE1Q14687 1217 aa23.5■■□□□ 1.35
VRK2-205ENST00000432057 CCDC158Q5M9N0 1113 aa23.5■■□□□ 1.35
VRK2-205ENST00000432057 GBP4Q96PP9 640 aa23.5■■□□□ 1.35
VRK2-205ENST00000432057 ZKSCAN1P17029 563 aaPredicted RBP23.49■■□□□ 1.35
VRK2-205ENST00000432057 AK2P54819 239 aa23.49■■□□□ 1.35
VRK2-205ENST00000432057 PKP1Q13835 747 aa23.49■■□□□ 1.35
VRK2-205ENST00000432057 VGLL2Q8N8G2 317 aa23.49■■□□□ 1.35
VRK2-205ENST00000432057 GJD4Q96KN9 370 aaPredicted RBP23.49■■□□□ 1.35
VRK2-205ENST00000432057 RPAP1Q9BWH6 1393 aaPredicted RBP23.49■■□□□ 1.35
VRK2-205ENST00000432057 DDX11L8A8MPP1 907 aa23.49■■□□□ 1.35
VRK2-205ENST00000432057 CYP2E1P05181 493 aaPredicted RBP23.49■■□□□ 1.35
VRK2-205ENST00000432057 NUCB2P80303 420 aa23.49■■□□□ 1.35
VRK2-205ENST00000432057 MCMDC2Q4G0Z9 681 aa23.49■■□□□ 1.35
VRK2-205ENST00000432057 TM6SF1Q9BZW5 370 aa23.49■■□□□ 1.35
VRK2-205ENST00000432057 ZNF652Q9Y2D9 606 aa23.49■■□□□ 1.35
VRK2-205ENST00000432057 TAF1P21675 1872 aa23.48■■□□□ 1.35
VRK2-205ENST00000432057 SLFNL1Q499Z3 407 aa23.48■■□□□ 1.35
VRK2-205ENST00000432057 ATRNO75882 1429 aa23.48■■□□□ 1.35
VRK2-205ENST00000432057 C4AP0C0L4 1744 aa23.48■■□□□ 1.35
VRK2-205ENST00000432057 C4BP0C0L5 1744 aa23.48■■□□□ 1.35
VRK2-205ENST00000432057 COL24A1Q17RW2 1714 aa23.48■■□□□ 1.35
VRK2-205ENST00000432057 ABCC12Q96J65 1359 aa23.48■■□□□ 1.35
VRK2-205ENST00000432057 COL4A1P02462 1669 aa23.47■■□□□ 1.35
VRK2-205ENST00000432057 ZSWIM6Q9HCJ5 1215 aa23.47■■□□□ 1.35
VRK2-205ENST00000432057 SCARF1Q14162 830 aa23.47■■□□□ 1.35
VRK2-205ENST00000432057 RUFY3Q7L099 469 aa23.47■■□□□ 1.35
VRK2-205ENST00000432057 TAF6LQ9Y6J9 622 aa23.47■■□□□ 1.35
VRK2-205ENST00000432057 FKBP4Q02790 459 aaKnown RBP eCLIP23.46■■□□□ 1.35
VRK2-205ENST00000432057 SMIM5Q71RC9 77 aa23.46■■□□□ 1.35
VRK2-205ENST00000432057 INTS4Q96HW7 963 aaKnown RBP23.46■■□□□ 1.35
VRK2-205ENST00000432057 CYP46A1Q9Y6A2 500 aa23.46■■□□□ 1.35
VRK2-205ENST00000432057 RNF20Q5VTR2 975 aa23.45■■□□□ 1.35
VRK2-205ENST00000432057 LARP6Q9BRS8 491 aaKnown RBP23.45■■□□□ 1.35
VRK2-205ENST00000432057 PDRG1Q9NUG6 133 aa23.45■■□□□ 1.35
VRK2-205ENST00000432057 PDE8BO95263 885 aa23.45■■□□□ 1.34
VRK2-205ENST00000432057 ZMYM1Q5SVZ6 1142 aa23.45■■□□□ 1.34
VRK2-205ENST00000432057 USPL1Q5W0Q7 1092 aa23.45■■□□□ 1.34
VRK2-205ENST00000432057 SEC31BQ9NQW1 1179 aa23.45■■□□□ 1.34
VRK2-205ENST00000432057 HELLSQ9NRZ9 838 aa23.45■■□□□ 1.34
VRK2-205ENST00000432057 TRPC5Q9UL62 973 aaPredicted RBP23.45■■□□□ 1.34
VRK2-205ENST00000432057 VPS53Q5VIR6 699 aa23.44■■□□□ 1.34
VRK2-205ENST00000432057 CLEC4GQ6UXB4 293 aa23.44■■□□□ 1.34
VRK2-205ENST00000432057 TICAM2Q86XR7 235 aa23.44■■□□□ 1.34
VRK2-205ENST00000432057 BRWD3Q6RI45 1802 aa23.44■■□□□ 1.34
VRK2-205ENST00000432057 RNF113AO15541 343 aaKnown RBP23.43■■□□□ 1.34
VRK2-205ENST00000432057 COL9A3Q14050 684 aaPredicted RBP23.43■■□□□ 1.34
VRK2-205ENST00000432057 PI16Q6UXB8 463 aa23.43■■□□□ 1.34
VRK2-205ENST00000432057 HMG20BQ9P0W2 317 aa23.43■■□□□ 1.34
VRK2-205ENST00000432057 LIMCH1Q9UPQ0 1083 aa23.43■■□□□ 1.34
VRK2-205ENST00000432057 ZDHHC9Q9Y397 364 aa23.43■■□□□ 1.34
VRK2-205ENST00000432057 RTL9Q8NET4 1388 aa23.43■■□□□ 1.34
VRK2-205ENST00000432057 BAG4O95429 457 aaKnown RBP23.43■■□□□ 1.34
VRK2-205ENST00000432057 ZAP70P43403 619 aa23.43■■□□□ 1.34
VRK2-205ENST00000432057 CCDC152Q4G0S7 254 aa23.43■■□□□ 1.34
VRK2-205ENST00000432057 CLEC17AQ6ZS10 378 aa23.43■■□□□ 1.34
VRK2-205ENST00000432057 HELBQ8NG08 1087 aaPredicted RBP23.43■■□□□ 1.34
VRK2-205ENST00000432057 CCNL1Q9UK58 526 aaPredicted RBP23.43■■□□□ 1.34
VRK2-205ENST00000432057 MAST3O60307 1309 aa23.43■■□□□ 1.34
VRK2-205ENST00000432057 MROH5Q6ZUA9 1318 aa23.43■■□□□ 1.34
VRK2-205ENST00000432057 DOCK2Q92608 1830 aa23.42■■□□□ 1.34
VRK2-205ENST00000432057 RC3H1Q5TC82 1133 aaKnown RBP23.42■■□□□ 1.34
VRK2-205ENST00000432057 U3KPZ7 1027 aaPredicted RBP23.42■■□□□ 1.34
VRK2-205ENST00000432057 TRAK2O60296 914 aa23.41■■□□□ 1.34
VRK2-205ENST00000432057 LARGE1O95461 756 aa23.41■■□□□ 1.34
VRK2-205ENST00000432057 PSMA5P28066 241 aa23.41■■□□□ 1.34
VRK2-205ENST00000432057 MCAMP43121 646 aa23.41■■□□□ 1.34
VRK2-205ENST00000432057 ONECUT3O60422 494 aaPredicted RBP23.41■■□□□ 1.34
VRK2-205ENST00000432057 HSP90B1P14625 803 aaKnown RBP23.41■■□□□ 1.34
VRK2-205ENST00000432057 BCL2L12Q9HB09 334 aa23.41■■□□□ 1.34
VRK2-205ENST00000432057 M0R2C6 588 aa23.4■■□□□ 1.34
VRK2-205ENST00000432057 GNPATO15228 680 aa23.4■■□□□ 1.34
VRK2-205ENST00000432057 RPS6KA4O75676 772 aa23.4■■□□□ 1.34
VRK2-205ENST00000432057 PUM3Q15397 648 aaKnown RBP23.4■■□□□ 1.34
VRK2-205ENST00000432057 TSGA10IPQ3SY00 556 aa23.4■■□□□ 1.34
VRK2-205ENST00000432057 ERFEQ4G0M1 354 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms